Multiple platform build/check report for BioC 3.11

Results for machv2

This page was generated on 2020-10-17 12:00:00 -0400 (Sat, 17 Oct 2020).

Package propagation status is indicated by one of the following LEDs
	YES: Package was propagated because it didn't previously exist or version was bumped
	NO: Package was not propagated because of a problem (impossible dependencies, or version lower than what is already propagated)
	UNNEEDED: Package was not propagated because it is already in the repository with this version. A version bump is required in order to propagate it

A ~~crossed-out~~ package name indicates the package is deprecated

SUMMARY

OS / Arch

INSTALL

BUILD

CHECK

BUILD BIN

malbec2

Linux (Ubuntu 18.04.4 LTS) / x86_64

1882

1829

274

1494

tokay2

Windows Server 2012 R2 Standard / x64

1852

1792

395

1317

1531

[machv2]

macOS 10.14.6 Mojave / x86_64

1870

1809

277

1466

1808

a4 1.36.0

Tobias Verbeke

WARNINGS

a4Base 1.36.0

Tobias Verbeke

WARNINGS

a4Classif 1.36.0

Tobias Verbeke

a4Core 1.36.0

Tobias Verbeke

a4Preproc 1.36.0

Tobias Verbeke

a4Reporting 1.36.0

Tobias Verbeke

WARNINGS

ABAEnrichment 1.18.0

Steffi Grote

ABarray 1.56.0

Yongming Andrew Sun

abseqR 1.6.0

JiaHong Fong

ABSSeq 1.42.0

Wentao Yang

acde 1.18.0

Juan Pablo Acosta

ACE 1.6.0

Jos B Poell

aCGH 1.66.0

Peter Dimitrov

ACME 2.44.0

Sean Davis

ADaCGH2 2.28.1

Ramon Diaz-Uriarte

ADAM 1.4.0

Jose Luiz Rybarczyk Filho

ADAMgui 1.4.0

Jose Luiz Rybarczyk Filho

adaptest 1.8.0

Weixin Cai

ERROR

adductomicsR 1.4.0

Josie Hayes

WARNINGS

adSplit 1.58.0

Claudio Lottaz

WARNINGS

AffiXcan 1.6.0

Alessandro Lussana

affxparser 1.60.0

Kasper Daniel Hansen

WARNINGS

affy 1.66.0

Rafael A. Irizarry

WARNINGS

affycomp 1.64.0

Rafael A. Irizarry

AffyCompatible 1.48.0

Martin Morgan

affyContam 1.46.0

V. Carey

affycoretools 1.60.1

James W. MacDonald

AffyExpress 1.54.0

Xuejun Arthur Li

affyILM 1.40.0

Myriam Kroll and Fabrice Berger

affyio 1.58.0

Ben Bolstad

affylmGUI 1.62.0

Gordon Smyth

affyPara 1.48.0

Markus Schmidberger

~~affypdnn~~ 1.62.0

Laurent Gautier

ERROR

affyPLM 1.64.0

Ben Bolstad

affyQCReport 1.66.0

Craig Parman

AffyRNADegradation 1.34.0

Mario Fasold

AGDEX 1.36.0

Cuilan lani Gao

agilp 3.20.0

Benny Chain

AgiMicroRna 2.38.0

Pedro Lopez-Romero

AIMS 1.20.0

Eric R Paquet

ALDEx2 1.20.0

Greg Gloor

alevinQC 1.4.0

Charlotte Soneson

AllelicImbalance 1.26.0

Jesper R Gadin

AlphaBeta 1.2.3

Yadollah Shahryary Dizaji

alpine 1.14.0

Michael Love

ALPS 1.2.0

Venu Thatikonda

alsace 1.24.0

Ron Wehrens

altcdfenvs 2.50.0

Laurent Gautier

AMARETTO 1.4.0

Olivier Gevaert

AMOUNTAIN 1.14.0

Dong Li

amplican 1.10.1

Eivind Valen

~~AnalysisPageServer~~ 1.22.0

Brad Friedman

ERROR

~~anamiR~~ 1.16.0

Ti-Tai Wang

ERROR

skipped

Anaquin 2.12.0

Ted Wong

AneuFinder 1.16.0

Aaron Taudt

ANF 1.10.0

Tianle Ma

animalcules 1.4.0

Yue Zhao

annaffy 1.60.0

Colin A. Smith

WARNINGS

annmap 1.30.0

Chris Wirth

WARNINGS

annotate 1.66.0

Bioconductor Package Maintainer

ERROR

AnnotationDbi 1.50.3

Bioconductor Package Maintainer

AnnotationFilter 1.12.0

Bioconductor Package Maintainer

AnnotationForge 1.30.1

Bioconductor Package Maintainer

AnnotationFuncs 1.38.0

Stefan McKinnon Edwards

AnnotationHub 2.20.2

Bioconductor Package Maintainer

WARNINGS

AnnotationHubData 1.18.1

Bioconductor Package Maintainer

WARNINGS

annotationTools 1.62.0

Alexandre Kuhn

annotatr 1.14.0

Raymond G. Cavalcante

anota 1.36.0

Ola Larsson

anota2seq 1.10.0

Christian Oertlin , Julie Lorent

antiProfiles 1.28.0

Hector Corrada Bravo

AnVIL 1.0.3

Martin Morgan

APAlyzer 1.2.0

Ruijia Wang

apComplex 2.54.0

Denise Scholtens

apeglm 1.10.0

Anqi Zhu

appreci8R 1.6.0

Sarah Sandmann

aroma.light 3.18.0

Henrik Bengtsson

ArrayExpress 1.48.0

Suhaib Mohammed

ArrayExpressHTS 1.38.0

Angela Goncalves , Andrew Tikhonov

arrayMvout 1.46.0

V. Carey

arrayQuality 1.66.0

Agnes Paquet

WARNINGS

arrayQualityMetrics 3.44.0

Mike Smith

ArrayTools 1.48.0

Arthur Li

ArrayTV 1.26.0

Eitan Halper-Stromberg

ERROR

skipped

ARRmNormalization 1.28.0

Jean-Philippe Fortin

artMS 1.6.5

David Jimenez-Morales

ASAFE 1.14.0

Qian Zhang

ASEB 1.32.0

Likun Wang

ASGSCA 1.22.0

Hela Romdhani

ASICS 2.4.3

Gaëlle Lefort

WARNINGS

ASpediaFI 1.2.0

Doyeong Yu

ASpli 1.14.0

Estefania Mancini

AssessORF 1.6.0

Deepank Korandla

ASSET 2.6.0

Samsiddhi Bhattacharjee

WARNINGS

ASSIGN 1.24.0

Ying Shen , W. Evan Johnson

ATACseqQC 1.12.5

Jianhong Ou

atSNP 1.4.0

Sunyoung Shin

attract 1.40.0

Samuel Zimmerman

AUCell 1.10.0

Sara Aibar

Autotuner 1.2.0

Craig McLean

AWFisher 1.2.0

Zhiguang Huo

BaalChIP 1.14.0

Ines de Santiago

WARNINGS

BAC 1.48.0

Raphael Gottardo

bacon 1.16.0

Maarten van Iterson

BADER 1.26.0

Andreas Neudecker

BadRegionFinder 1.16.0

Sarah Sandmann

BAGS 2.28.0

Alejandro Quiroz-Zarate

ballgown 2.20.0

Jack Fu

bamsignals 1.20.0

Johannes Helmuth

BANDITS 1.4.1

Simone Tiberi

banocc 1.12.0

George Weingart

basecallQC 1.12.0

Thomas Carroll

BaseSpaceR 1.32.0

Jared O'Connell

Basic4Cseq 1.24.0

Carolin Walter

BASiCS 2.0.0

Catalina Vallejos

BasicSTARRseq 1.16.0

Annika Buerger

basilisk 1.0.2

Aaron Lun

basilisk.utils 1.0.4

Aaron Lun

batchelor 1.4.0

Aaron Lun

BatchQC 1.16.3

Solaiappan Manimaran

BayesKnockdown 1.14.0

William Chad Young

~~BayesPeak~~ 1.40.0

Jonathan Cairns

ERROR

skipped

bayNorm 1.6.0

Wenhao Tang

baySeq 2.22.0

Thomas J. Hardcastle

BBCAnalyzer 1.18.0

Sarah Sandmann

BCRANK 1.50.0

Adam Ameur

bcSeq 1.10.0

Jiaxing Lin

BDMMAcorrect 1.6.0

ZHENWEI DAI

beachmat 2.4.0

Aaron Lun

beadarray 2.38.0

Mark Dunning

beadarraySNP 1.54.0

Jan Oosting

BeadDataPackR 1.40.0

Mike Smith

BEARscc 1.8.1

Benjamin Schuster-Boeckler

BEAT 1.26.0

Kemal Akman

BEclear 2.4.0

David Rasp

WARNINGS

~~bgafun~~ 1.50.0

Iain Wallace

ERROR

skipped

BgeeCall 1.4.1

Julien Wollbrett

BgeeDB 2.14.5

Julien Wollbrett , Julien Roux , Andrea Komljenovic , Frederic Bastian

BGmix 1.48.0

Alex Lewin

bgx 1.54.1

Ernest Turro

WARNINGS

BHC 1.40.0

Rich Savage

BicARE 1.46.0

Pierre Gestraud

BiFET 1.8.0

Ahrim Youn

BiGGR

...NOT SUPPORTED...

bigmelon 1.14.0

Tyler J. Gorrie-Stone

bigmemoryExtras 1.36.0

Peter M. Haverty

WARNINGS

bigPint 1.4.0

Lindsay Rutter

bioassayR 1.26.0

Tyler Backman

Biobase 2.48.0

Bioconductor Package Maintainer

biobroom 1.20.0

John D. Storey and Andrew J. Bass

biobtreeR 1.0.0

Tamer Gur

bioCancer 1.16.0

Karim Mezhoud

WARNINGS

BiocCaseStudies 1.50.0

Bioconductor Package Maintainer

BiocCheck 1.24.0

Bioconductor Package Maintainer

BiocDockerManager 1.0.1

Maintainer

BiocFileCache 1.12.1

Lori Shepherd

BiocGenerics 0.34.0

Bioconductor Package Maintainer

WARNINGS

biocGraph 1.50.0

Florian Hahne

BiocNeighbors 1.6.0

Aaron Lun

BiocOncoTK 1.8.0

VJ Carey

BioCor 1.12.0

Lluís Revilla Sancho

BiocParallel 1.22.0

Bioconductor Package Maintainer

WARNINGS

BiocPkgTools 1.6.0

Sean Davis

BiocSet 1.2.2

Kayla Morrell

BiocSingular 1.4.0

Aaron Lun

BiocSklearn 1.10.3

VJ Carey

BiocStyle 2.16.1

Bioconductor Package Maintainer

BiocVersion 3.11.1

Bioconductor Package Maintainer

biocViews 1.56.2

Bioconductor Package Maintainer

BiocWorkflowTools 1.14.0

Mike Smith

bioDist 1.60.0

Bioconductor Package Maintainer

biomaRt 2.44.4

Mike Smith

biomformat 1.16.0

Paul J. McMurdie

WARNINGS

BioMM 1.4.0

Junfang Chen

BioMVCClass 1.56.0

Elizabeth Whalen

biomvRCNS 1.28.0

Yang Du

BioNet 1.48.0

Marcus Dittrich

ERROR

skipped

BioNetStat 1.8.4

Vinicius Jardim

BioQC 1.16.0

Jitao David Zhang

BioSeqClass 1.46.0

Li Hong

ERROR

skipped

biosigner 1.16.0

Philippe Rinaudo , Etienne Thevenot

WARNINGS

Biostrings 2.56.0

H. Pagès

WARNINGS

~~biosvd~~ 2.24.0

Anneleen Daemen , Matthew Brauer

ERROR

BioTIP 1.2.0

Zhezhen Wang , X Holly Yang < xyang2@uchicago> and Yuxi (Jennifer) Sun

WARNINGS

biotmle 1.12.0

Nima Hejazi

biovizBase 1.36.0

Michael Lawrence

WARNINGS

BiRewire 3.20.0

Andrea Gobbi

~~birta~~ 1.32.0

Benedikt Zacher

ERROR

biscuiteer 1.2.0

"Jacob Morrison"

WARNINGS

BiSeq 1.28.0

Katja Hebestreit

BitSeq 1.32.0

Antti Honkela , Panagiotis Papastamoulis

WARNINGS

blacksheepr 1.2.0

RugglesLab

blima 1.22.0

Vojtěch Kulvait

WARNINGS

BLMA 1.12.0

Tin Nguyen

bnbc 1.10.0

Kipper Fletez-Brant

BPRMeth 1.14.1

Chantriolnt-Andreas Kapourani

BRAIN 1.34.0

Piotr Dittwald

WARNINGS

brainflowprobes 1.2.0

Amanda Price

BrainStars 1.32.0

Itoshi NIKAIDO

ERROR

skipped

branchpointer 1.14.0

Beth Signal

breakpointR 1.6.0

David Porubsky

brendaDb 1.2.0

Yi Zhou

ERROR

BRGenomics 1.0.3

Mike DeBerardine

bridge 1.52.0

Raphael Gottardo

BridgeDbR 1.22.0

Egon Willighagen

BrowserViz 2.10.0

Paul Shannon

BSgenome 1.56.0

H. Pagès

WARNINGS

bsseq 1.24.4

Kasper Daniel Hansen

BubbleTree 2.18.0

Todd Creasy , Wei Zhu

BufferedMatrix 1.52.0

Ben Bolstad

BufferedMatrixMethods 1.52.0

Ben Bolstad

BUMHMM 1.12.0

Alina Selega

bumphunter 1.30.0

Rafael A. Irizarry

BUS 1.44.0

Yuanhua Liu

BUScorrect 1.6.0

Xiangyu Luo

BUSpaRse 1.2.2

Lambda Moses

CAFE 1.24.0

Sander Bollen

WARNINGS

CAGEfightR 1.8.0

Malte Thodberg

CAGEr 1.30.3

Vanja Haberle , Charles Plessy , Damir Baranasic , Sarvesh Nikumbh

~~CALIB~~ 1.54.0

Hui Zhao

ERROR

calm 1.2.0

Kun Liang

CAMERA 1.44.0

Steffen Neumann

WARNINGS

~~CAMTHC~~ 1.6.0

Lulu Chen

WARNINGS

canceR 1.22.01

Karim Mezhoud

cancerclass 1.32.0

Daniel Kosztyla

WARNINGS

CancerInSilico 2.8.0

Thomas D. Sherman

CancerMutationAnalysis 1.30.0

Simina M. Boca

CancerSubtypes 1.14.0

Taosheng Xu

CAnD 1.20.0

Caitlin McHugh

caOmicsV 1.18.0

Henry Zhang

WARNINGS

Cardinal 2.6.0

Kylie A. Bemis

CARNIVAL 1.0.0

Enio Gjerga

casper 2.22.0

David Rossell

WARNINGS

CATALYST 1.12.2

Helena L. Crowell

Category 2.54.0

Bioconductor Package Maintainer

categoryCompare 1.32.0

Robert M. Flight

CausalR 1.20.0

Glyn Bradley , Steven Barrett

cbaf 1.10.1

Arman Shahrisa

cBioPortalData 2.0.10

Marcel Ramos

ccfindR 1.8.0

Jun Woo

ccmap 1.14.0

Alex Pickering

CCPROMISE 1.14.0

Xueyuan Cao

WARNINGS

ccrepe 1.24.0

Emma Schwager ,Craig Bielski, George Weingart

celaref 1.6.0

Sarah Williams

celda 1.4.7

Joshua Campbell

cellbaseR 1.12.0

Mohammed OE Abdallah

CellBench 1.4.1

Shian Su

~~cellGrowth~~ 1.32.0

Julien Gagneur

ERROR

skipped

cellHTS2 2.52.0

Joseph Barry

cellity 1.16.0

Tomislav Ilicic

CellMapper 1.14.0

Brad Nelms

WARNINGS

CellMixS 1.4.2

Almut Lütge

CellNOptR 1.34.0

A.Gabor

WARNINGS

cellscape 1.12.0

Maia Smith

WARNINGS

CellScore 1.8.0

Nancy Mah

CellTrails 1.6.1

Daniel Ellwanger

cellTree 1.18.0

David duVerle

CEMiTool 1.12.2

Helder Nakaya

WARNINGS

ceRNAnetsim 1.0.0

Selcen Ari Yuka

CeTF 1.0.7

Carlos Alberto Oliveira de Biagi Junior

CexoR 1.26.0

Pedro Madrigal

CFAssay 1.22.0

Herbert Braselmann

CGEN 3.24.0

William Wheeler

ERROR

CGHbase 1.48.0

Mark van de Wiel

CGHcall 2.50.0

Mark van de Wiel

cghMCR 1.46.0

J. Zhang

WARNINGS

CGHnormaliter 1.42.0

Bart P.P. van Houte

CGHregions 1.46.0

Sjoerd Vosse

ChAMP 2.18.3

Yuan Tian

WARNINGS

CHARGE 1.8.0

Benjamin Mayne

ERROR

skipped

ChemmineOB 1.26.0

Thomas Girke

WARNINGS

ChemmineR 3.40.0

Thomas Girke

WARNINGS

CHETAH 1.4.0

Jurrian de Kanter

ChIC 1.8.0

Carmen Maria Livi

Chicago 1.16.1

Mikhail Spivakov

chimera 1.30.0

Raffaele A Calogero

chimeraviz 1.14.0

Stian Lågstad

ERROR

skipped

ChIPanalyser 1.10.0

Patrick C.N. Martin

ChIPComp 1.18.0

Li Chen

chipenrich 2.12.0

Raymond G. Cavalcante

ChIPexoQual 1.12.0

Rene Welch

ChIPpeakAnno 3.22.4

Lihua Julie Zhu

ChIPQC 1.24.1

Tom Carroll , Rory Stark

WARNINGS

ChIPseeker 1.24.0

Guangchuang Yu

chipseq 1.38.0

Bioconductor Package Maintainer

WARNINGS

ChIPseqR 1.42.0

Peter Humburg

ChIPSeqSpike 1.8.0

Nicolas Descostes

ChIPsim 1.42.0

Peter Humburg

ChIPXpress 1.32.0

George Wu

chopsticks 1.54.0

Hin-Tak Leung

WARNINGS

~~chroGPS~~ 2.6.0

Oscar Reina

ERROR

skipped

chromDraw 2.18.0

Jan Janecka

WARNINGS

ChromHeatMap 1.42.0

Tim F. Rayner

chromPlot 1.16.0

Karen Y. Orostica

chromstaR 1.14.1

Aaron Taudt

chromswitch 1.10.0

Selin Jessa

chromVAR 1.10.0

Alicia Schep

CHRONOS 1.16.0

Panos Balomenos

cicero 1.6.2

Hannah Pliner

CINdex 1.16.0

Yuriy Gusev

circRNAprofiler 1.2.1

Simona Aufiero

cisPath 1.28.0

Likun Wang

WARNINGS

CiteFuse 1.0.0

Yingxin Lin

ClassifyR 2.8.0

Dario Strbenac

cleanUpdTSeq 1.26.0

Jianhong Ou ; Lihua Julie Zhu

cleaver 1.26.1

Sebastian Gibb

ERROR

skipped

clippda 1.38.0

Stephen Nyangoma

WARNINGS

clipper 1.28.0

Paolo Martini

cliqueMS 1.2.1

Oriol Senan Campos

Clomial 1.24.0

Habil Zare

Clonality 1.36.0

Irina Ostrovnaya

clonotypeR 1.26.0

Charles Plessy

clst 1.36.0

Noah Hoffman

WARNINGS

clstutils 1.36.0

Noah Hoffman

WARNINGS

CluMSID 1.4.0

Tobias Depke

clustComp 1.16.0

Aurora Torrente

clusterExperiment 2.8.0

Elizabeth Purdom

WARNINGS

ClusterJudge 1.10.0

Adrian Pasculescu

clusterProfiler 3.16.1

Guangchuang Yu

clusterSeq 1.12.0

Thomas J. Hardcastle

ClusterSignificance 1.16.0

Jason T Serviss

clusterStab 1.60.0

James W. MacDonald

clustifyr 1.0.0

Rui Fu

CMA 1.46.0

Roman Hornung

cmapR 1.0.0

Ted Natoli

WARNINGS

cn.farms 1.36.0

Andreas Mitterecker

cn.mops 1.34.0

Gundula Povysil

CNAnorm 1.34.0

Stefano Berri

CNEr 1.24.0

Ge Tan

WARNINGS

CNORdt 1.30.0

A. MacNamara

CNORfeeder 1.28.0

E.Gjerga

CNORfuzzy 1.30.0

T. Cokelaer

CNORode 1.30.0

Enio Gjerga

WARNINGS

CNTools 1.44.0

J. Zhang

CNVfilteR 1.2.0

Jose Marcos Moreno-Cabrera

cnvGSA 1.32.0

Joseph Lugo

CNVPanelizer 1.20.0

Thomas Wolf

CNVRanger 1.4.3

Ludwig Geistlinger

CNVrd2 1.26.0

Hoang Tan Nguyen

CNVtools 1.82.0

Chris Barnes

ERROR

skipped

~~cobindR~~ 1.26.0

Manuela Benary

ERROR

skipped

CoCiteStats 1.60.0

Bioconductor Package Maintainer

COCOA 2.2.1

John Lawson

codelink 1.56.0

Diego Diez

CODEX 1.20.0

Yuchao Jiang

coexnet 1.10.3

Juan David Henao

CoGAPS 3.8.0

Elana J. Fertig

cogena 1.22.0

Zhilong Jia

WARNINGS

coGPS 1.32.0

Yingying Wei

COHCAP 1.34.1

Charles Warden

cola 1.4.1

Zuguang Gu

combi 1.0.0

Joris Meys

coMET 1.20.0

Tiphaine Martin

compartmap 1.6.0

Benjamin Johnson

WARNINGS

COMPASS 1.26.0

Greg Finak

compcodeR 1.24.0

Charlotte Soneson

WARNINGS

compEpiTools 1.22.0

Kamal Kishore

CompGO 1.24.0

Ashley J. Waardenberg

ComplexHeatmap 2.4.3

Zuguang Gu

CONFESS 1.16.0

Diana LOW

WARNINGS

consensus 1.6.1

Tim Peters

ConsensusClusterPlus 1.52.0

Matt Wilkerson

consensusDE 1.6.0

Ashley J. Waardenberg

consensusOV 1.10.0

Benjamin Haibe-Kains

consensusSeekeR 1.16.0

Astrid Deschenes

contiBAIT 1.16.0

Kieran O'Neill

WARNINGS

conumee 1.22.0

Volker Hovestadt

TIMEOUT

convert 1.64.0

Yee Hwa (Jean) Yang

copa 1.56.0

James W. MacDonald

copynumber 1.28.0

Gro Nilsen

CopyNumberPlots 1.4.0

Bernat Gel

CopywriteR 2.20.0

Oscar Krijgsman

coRdon 1.6.0

Anamaria Elek

CoRegFlux 1.4.0

Pauline Trébulle and Mohamed Elati

CoRegNet 1.26.0

Remy Nicolle

WARNINGS

CoreGx 1.0.2

Benjamin Haibe-Kains

Cormotif 1.34.0

Yingying Wei

CorMut 1.30.0

Zhenpeng Li

ERROR

skipped

CORREP 1.54.0

Dongxiao Zhu

coseq 1.12.0

Andrea Rau

cosmiq 1.22.0

David Fischer

COSNet 1.22.0

Marco Frasca

ERROR

skipped

CountClust 1.16.0

Kushal Dey

ERROR

skipped

countsimQC 1.6.0

Charlotte Soneson

covEB 1.14.0

C. Pacini

CoverageView 1.26.0

Ernesto Lowy

covRNA 1.14.0

Lara Urban

cpvSNP 1.20.0

Caitlin McHugh

cqn 1.34.0

Kasper Daniel Hansen

CRImage 1.36.0

Henrik Failmezger , Yinyin Yuan

CRISPRseek 1.28.0

Lihua Julie Zhu

crisprseekplus 1.14.0

Alper Kucukural

CrispRVariants 1.16.0

Helen Lindsay

WARNINGS

crlmm 1.46.0

Benilton S Carvalho

CrossICC 1.2.0

Yu Sun

crossmeta 1.14.0

Alex Pickering

WARNINGS

CSAR 1.40.0

Jose M Muino

csaw 1.22.1

Aaron Lun

CSSP 1.26.0

Chandler Zuo

CSSQ 1.0.5

Fan Lab at Georgia Institute of Technology

ctc 1.62.0

Antoine Lucas

~~CTDquerier~~ 1.8.0

Carles Hernandez-Ferrer

ERROR

ctgGEM 1.0.3

USD Biomedical Engineering

cTRAP 1.6.1

Nuno Saraiva-Agostinho

ctsGE 1.14.0

Michal Sharabi-Schwager

cummeRbund 2.30.0

Loyal A. Goff

WARNINGS

customProDB 1.28.0

Xiaojing Wang

~~CVE~~ 1.14.0

Andreas Mock

ERROR

cycle 1.42.0

Matthias Futschik

cydar 1.12.0

Aaron Lun

ERROR

CytoDx 1.8.0

Zicheng Hu

cytofast 1.4.0

K.A. Stam

cytolib 2.0.3

Mike Jiang , Jake Wagner

cytomapper 1.0.0

Nils Eling

CytoML 2.0.5

Mike Jiang , Jake Wagner

dada2 1.16.0

Benjamin Callahan

dagLogo 1.26.2

Jianhong Ou

daMA 1.60.0

Jobst Landgrebe

DAMEfinder 1.0.3

Stephany Orjuela

DaMiRseq 2.0.0

Mattia Chiesa

WARNINGS

DAPAR 1.20.3

Samuel Wieczorek

DART 1.36.0

Charles Shijie Zheng

DBChIP 1.32.0

Kun Liang

WARNINGS

dcanr 1.4.0

Dharmesh D. Bhuva

dcGSA 1.16.0

Jiehuan sun

WARNINGS

~~DChIPRep~~ 1.18.0

Bernd Klaus

WARNINGS

ddCt 1.44.0

Jitao David Zhang

ddPCRclust 1.8.0

Benedikt G. Brink

dearseq 1.0.0

Boris P. Hejblum

debCAM 1.6.0

Lulu Chen

debrowser 1.16.3

Alper Kucukural

DECIPHER 2.16.1

Erik Wright

deco 1.4.1

Francisco Jose Campos Laborie

DEComplexDisease 1.8.0

Guofeng Meng

decompTumor2Sig 2.4.1

Rosario M. Piro

DeconRNASeq 1.30.0

Ting Gong

decontam 1.8.0

Benjamin Callahan

~~DEDS~~ 1.62.0

Yuanyuan Xiao

ERROR

skipped

DeepBlueR 1.14.0

Felipe Albrecht , Markus List

deepSNV 1.34.1

Moritz Gerstung

DEFormats 1.16.0

Andrzej Oleś

DEGraph

...NOT SUPPORTED...

DEGreport 1.24.1

Lorena Pantano

DEGseq 1.42.0

Likun Wang

DelayedArray 0.14.1

Hervé Pagès

WARNINGS

DelayedDataFrame 1.4.0

Qian Liu

DelayedMatrixStats 1.10.1

Peter Hickey

deltaCaptureC 1.2.0

Michael Shapiro

deltaGseg 1.28.0

Diana Low

DeMAND 1.18.0

Jung Hoon Woo , Mariano Alvarez

DeMixT 1.4.0

Shaolong Cao, Peng Yang

DEP 1.10.0

Arne Smits

DepecheR 1.4.1

Jakob Theorell

DEqMS 1.6.0

Yafeng Zhu

derfinder 1.22.0

Leonardo Collado-Torres

derfinderHelper 1.22.0

Leonardo Collado-Torres

derfinderPlot 1.22.0

Leonardo Collado-Torres

DEScan2 1.8.0

Dario Righelli

~~DESeq~~ 1.40.0

Simon Anders

ERROR

skipped

DESeq2 1.28.1

Michael Love

DEsingle 1.8.2

Zhun Miao

destiny 3.2.0

Philipp Angerer

ERROR

skipped

DEsubs 1.14.0

Aristidis G. Vrahatis , Panos Balomenos

DEWSeq 1.2.0

Hentze bioinformatics team

DEXSeq 1.34.1

Alejandro Reyes

dexus 1.28.0

Guenter Klambauer

DFP 1.46.0

Rodrigo Alvarez-Glez

DIAlignR 1.0.5

Shubham Gupta

DiffBind 2.16.2

Rory Stark

diffcoexp 1.8.0

Wenbin Wei

diffcyt 1.8.8

Lukas M. Weber

diffGeneAnalysis 1.70.0

Choudary Jagarlamudi

diffHic 1.20.0

Aaron Lun

DiffLogo 2.12.2

Hendrik Treutler

diffloop 1.16.0

Caleb Lareau

diffuStats 1.8.0

Sergio Picart-Armada

WARNINGS

diggit 1.20.0

Mariano J Alvarez

WARNINGS

Director 1.14.0

Katherine Icay

DirichletMultinomial 1.30.0

Martin Morgan

discordant 1.12.0

Charlotte Siska

DiscoRhythm 1.4.2

Matthew Carlucci

distinct 1.0.4

Simone Tiberi

dittoSeq 1.0.2

Daniel Bunis

divergence 1.4.0

Wikum Dinalankara , Luigi Marchionni

dks 1.34.0

Jeffrey T. Leek

DMCFB 1.2.0

Farhad Shokoohi

DMCHMM 1.10.0

Farhad Shokoohi

DMRcaller 1.20.0

Nicolae Radu Zabet

DMRcate 2.2.3

Tim Peters

DMRforPairs 1.24.0

Martin Rijlaarsdam

DMRScan 1.10.0

Christian M Page

dmrseq 1.8.0

Keegan Korthauer

WARNINGS

DNABarcodeCompatibility 1.4.0

Céline Trébeau

DNABarcodes 1.18.0

Tilo Buschmann

DNAcopy 1.62.0

Venkatraman E. Seshan

DNAshapeR 1.16.0

Tsu-Pei Chiu

DominoEffect 1.8.0

Marija Buljan

doppelgangR 1.16.0

Levi Waldron

Doscheda 1.10.4

Bruno Contrino

DOSE 3.14.0

Guangchuang Yu

doseR 1.4.0

ake.vastermark

dpeak 1.0.0

Dongjun Chung

drawProteins

ERROR (Bad DESCRIPTION file)

DRIMSeq 1.16.1

Malgorzata Nowicka

WARNINGS

DriverNet 1.28.0

Jiarui Ding

DropletUtils 1.8.0

Aaron Lun

DrugVsDisease 2.30.0

j. Saez-Rodriguez

DSS 2.36.0

Hao Wu , Hao Feng

DTA 2.34.0

Bjoern Schwalb

dualKS 1.48.0

Eric J. Kort

Dune 1.0.1

Hector Roux de Bezieux

~~DupChecker~~ 1.26.0

"Quanhu SHENG"

ERROR

skipped

dupRadar 1.18.0

Sergi Sayols , Holger Klein

dyebias 1.48.0

Philip Lijnzaad

DynDoc 1.66.0

Bioconductor Package Maintainer

EasyqpcR 1.30.0

Le Pape Sylvain

ERROR

skipped

easyreporting 1.0.0

Dario Righelli

easyRNASeq 2.24.1

Nicolas Delhomme

EBarrays 2.52.0

Ming Yuan

EBcoexpress 1.32.0

John A. Dawson

EBImage 4.30.0

Andrzej Oleś

EBSEA 1.16.0

Arfa Mehmood

EBSeq 1.28.0

Ning Leng

EBSeqHMM 1.22.0

Ning Leng

ecolitk 1.60.0

Laurent Gautier

WARNINGS

EDASeq 2.22.0

Davide Risso

EDDA 1.26.0

Chia Kuan Hui Burton , Niranjan Nagarajan

WARNINGS

edge 2.20.0

John D. Storey , Andrew J. Bass

WARNINGS

edgeR 3.30.3

Yunshun Chen , Gordon Smyth , Aaron Lun , Mark Robinson

eegc 1.14.0

Xiaoyuan Zhou

WARNINGS

EGAD 1.16.0

Sara Ballouz

EGSEA 1.16.0

Monther Alhamdoosh

eiR 1.28.0

Thomas Girke

eisa 1.40.0

Gabor Csardi

eisaR 1.0.0

Michael Stadler

ELBOW 1.24.0

Graham Alvare , Xiangli Zhang

ELMER 2.12.0

Tiago Chedraoui Silva

EMDomics 2.18.0

Sadhika Malladi and Daniel Schmolze

EmpiricalBrownsMethod 1.16.0

David Gibbs

ENCODExplorer 2.14.0

Charles Joly Beauparlant

EnhancedVolcano 1.6.0

Kevin Blighe

EnMCB 1.0.11

Xin Yu

ENmix 1.25.1

Zongli Xu

EnrichedHeatmap 1.18.2

Zuguang Gu

EnrichmentBrowser 2.18.2

Ludwig Geistlinger

enrichplot 1.8.1

Guangchuang Yu

enrichTF 1.4.0

Zheng Wei

ensembldb 2.12.1

Johannes Rainer

ensemblVEP 1.30.0

Bioconductor Package Maintainer

ENVISIONQuery 1.36.0

Alex Lisovich , Roger Day

ERROR

skipped

EpiDISH 2.4.0

Shijie Charles Zheng

epigenomix 1.28.0

Hans-Ulrich Klein

epihet 1.4.0

Xiaowen Chen

epiNEM 1.12.0

Martin Pirkl

EpiTxDb 1.0.0

Felix G.M. Ernst

epivizr 2.18.0

Hector Corrada Bravo

epivizrChart 1.10.0

Hector Corrada Bravo

epivizrData 1.16.0

Hector Corrada Bravo

epivizrServer 1.16.0

Hector Corrada Bravo

epivizrStandalone 1.16.0

Hector Corrada Bravo

erccdashboard 1.22.0

Sarah Munro

erma 1.4.0

VJ Carey

ERSSA 1.6.0

Zixuan Shao

esATAC 1.10.0

Zheng Wei

esetVis 1.14.0

Laure Cougnaud

eudysbiome 1.18.0

Xiaoyuan Zhou

evaluomeR 1.4.0

José Antonio Bernabé-Díaz

EventPointer 2.6.0

Juan Pablo Romero

ExCluster 1.6.0

R. Matthew Tanner

ExiMiR 2.30.0

Sylvain Gubian

exomeCopy 1.34.0

Michael Love

exomePeak2 1.0.0

Zhen Wei

ExperimentHub 1.14.2

Bioconductor Package Maintainer

ExperimentHubData 1.14.1

Bioconductor Package Maintainer

explorase

...NOT SUPPORTED...

ExploreModelMatrix 1.0.2

Charlotte Soneson

ExpressionAtlas 1.16.0

Suhaib Mohammed

ExpressionView 1.40.0

Gabor Csardi

WARNINGS

fabia 2.34.0

Andreas Mitterecker

factDesign 1.64.0

Denise Scholtens

FamAgg 1.16.0

Johannes Rainer

farms 1.40.0

Djork-Arne Clevert

fastLiquidAssociation 1.24.0

Tina Gunderson

WARNINGS

FastqCleaner 1.6.0

Leandro Roser

fastseg 1.34.0

Guenter Klambauer

WARNINGS

FCBF 1.6.0

Tiago Lubiana

fCCAC 1.14.0

Pedro Madrigal

fCI 1.18.0

Shaojun Tang

WARNINGS

fcoex 1.2.0

Tiago Lubiana

WARNINGS

fcScan 1.2.0

Pierre Khoueiry Abdallah El-Kurdi

fdrame 1.60.0

Effi Kenigsberg

FELLA 1.8.0

Sergio Picart-Armada

~~FEM~~ 3.16.0

Zhen Yang

ERROR

ffpe 1.32.0

Levi Waldron

FGNet 3.22.1

Sara Aibar

WARNINGS

fgsea 1.14.0

Alexey Sergushichev

FindMyFriends 1.18.0

Thomas Lin Pedersen

WARNINGS

FISHalyseR 1.22.0

Karesh Arunakirinathan

WARNINGS

fishpond 1.4.1

Michael Love

FitHiC 1.14.0

Ruyu Tan

flagme 1.44.0

Mark Robinson , Riccardo Romoli

WARNINGS

flowAI 1.18.5

Gianni Monaco

flowBeads 1.26.0

Nikolas Pontikos

WARNINGS

flowBin 1.24.0

Kieran O'Neill

flowcatchR 1.22.0

Federico Marini

flowCHIC 1.22.0

Author: Joachim Schumann

flowCL 1.26.0

Justin Meskas

flowClean 1.26.0

Kipper Fletez-Brant

WARNINGS

flowClust 3.26.0

Greg Finak , Mike Jiang , Jake Wagner

WARNINGS

flowCore 2.0.1

Mike Jiang , Jake Wagner

flowCyBar 1.24.0

Joachim Schumann

flowDensity 1.22.0

Mehrnoush Malek

WARNINGS

flowFit 1.26.0

Davide Rambaldi

ERROR

skipped

flowFP 1.46.0

Herb Holyst

flowMap 1.26.0

Chiaowen Joyce Hsiao

WARNINGS

flowMatch 1.24.0

Ariful Azad

flowMeans 1.48.0

Nima Aghaeepour

flowMerge 2.36.0

Greg Finak

flowPeaks 1.34.0

Yongchao Ge

flowPloidy 1.14.0

Tyler Smith

flowPlots 1.36.0

N. Hawkins

FlowRepositoryR 1.20.0

Josef Spidlen

FlowSOM 1.20.0

Sofie Van Gassen

WARNINGS

flowSpecs 1.2.0

Jakob Theorell

flowSpy 1.2.3

Yuting Dai

flowStats 4.0.0

Greg Finak , Mike Jiang , Jake Wagner

flowTime 1.12.0

R. Clay Wright

flowTrans 1.40.0

Greg Finak

flowType 2.26.0

Nima Aghaeepour

ERROR

flowUtils 1.52.0

Josef Spidlen

WARNINGS

flowViz 1.52.0

Mike Jiang , Jake Wagner

flowVS 1.20.0

Ariful Azad

ERROR

flowWorkspace 4.0.6

Greg Finak ,Mike Jiang ,Jake Wagner

fmcsR 1.30.0

Thomas Girke

focalCall 1.22.0

Oscar Krijgsman

ERROR

FoldGO 1.6.0

Daniil Wiebe

~~FourCSeq~~ 1.22.1

Mike Smith

WARNINGS

FRASER 1.0.2

Christian Mertes

frenchFISH 1.0.0

Adam Berman

FRGEpistasis 1.24.0

Futao Zhang

frma 1.40.0

Matthew N. McCall

frmaTools 1.40.0

Matthew N. McCall

FunChIP 1.14.0

Alice Parodi

WARNINGS

FunciSNP 1.32.0

Simon G. Coetzee

funtooNorm 1.12.0

Kathleen Klein

WARNINGS

GA4GHclient 1.12.0

Welliton Souza

GA4GHshiny 1.10.0

Welliton Souza

gaga 2.34.0

David Rossell

WARNINGS

gage 2.38.3

Weijun Luo

WARNINGS

gaggle 1.56.0

Christopher Bare

gaia 2.32.0

S. Morganella

GAPGOM 1.4.0

Casper van Mourik

GAprediction 1.14.0

Jon Bohlin

garfield 1.16.0

Valentina Iotchkova

GARS 1.8.0

Mattia Chiesa

WARNINGS

GateFinder 1.8.0

Nima Aghaeepour

gcapc 1.12.0

Mingxiang Teng

gcatest 1.18.0

Wei Hao , John D. Storey

~~gCMAP~~ 1.32.0

Thomas Sandmann

WARNINGS

~~gCMAPWeb~~ 1.28.0

Thomas Sandmann

ERROR

skipped

gCrisprTools 1.16.0

Russell Bainer

WARNINGS

gcrma 2.60.0

Z. Wu

GCSConnection 1.0.1

Jiefei Wang

GCSscore 1.2.0

Guy M. Harris

GDCRNATools 1.8.0

Ruidong Li

GDSArray 1.8.0

Qian Liu

gdsfmt 1.24.1

Xiuwen Zheng

~~geecc~~ 1.22.0

Markus Boenn

ERROR

GEM 1.14.0

Hong Pan

gemini 1.2.0

Sidharth Jain

genArise 1.64.0

IFC Development Team

WARNINGS

genbankr 1.16.0

Gabriel Becker

GeneAccord 1.6.0

Ariane L. Moore

GeneAnswers 2.30.0

Lei Huang and Gang Feng

WARNINGS

geneAttribution 1.14.0

Arthur Wuster

GeneBreak 1.18.0

Evert van den Broek

geneClassifiers 1.12.0

R Kuiper

GeneExpressionSignature 1.34.0

Yang Cao , Fei Li

WARNINGS

genefilter 1.70.0

Bioconductor Package Maintainer

genefu 2.20.0

Benjamin Haibe-Kains

GeneGA 1.38.0

Zhenpeng Li

GeneGeneInteR 1.14.0

Mathieu Emily , Magalie Houee-Bigot

GeneMeta 1.60.0

Bioconductor Package Maintainer

GeneNetworkBuilder 1.30.0

Jianhong Ou

GeneOverlap 1.24.0

Li Shen, Mount Sinai

geneplast 1.14.0

Mauro Castro

WARNINGS

geneplotter 1.66.0

Bioconductor Package Maintainer

geneRecommender 1.60.0

Greg Hather

GeneRegionScan 1.44.0

Lasse Folkersen

geneRxCluster 1.24.0

Charles Berry

GeneSelectMMD 2.32.0

Weiliang Qiu

WARNINGS

GENESIS 2.18.0

Stephanie M. Gogarten

GeneStructureTools 1.8.0

Beth Signal

geNetClassifier 1.28.0

Sara Aibar

GeneticsDesign 1.56.0

The R Genetics Project

ERROR

GeneticsPed 1.50.0

David Henderson

GeneTonic 1.0.1

Federico Marini

geneXtendeR 1.14.0

Bohdan Khomtchouk

GENIE3 1.10.0

Van Anh Huynh-Thu

genoCN 1.40.0

Wei Sun

GenoGAM 2.6.0

Georg Stricker

WARNINGS

genomation 1.20.0

Altuna Akalin , Vedran Franke

WARNINGS

GenomeInfoDb 1.24.2

Bioconductor Package Maintainer

genomeIntervals 1.44.2

Julien Gagneur

genomes 3.18.0

Chris Stubben

GenomicAlignments 1.24.0

Bioconductor Package Maintainer

GenomicDataCommons 1.12.0

Sean Davis

WARNINGS

GenomicFeatures 1.40.1

Bioconductor Package Maintainer

GenomicFiles 1.24.0

Bioconductor Package Maintainer

GenomicInteractions 1.22.0

Liz Ing-Simmons

GenomicOZone 1.2.0

Hua Zhong, Mingzhou Song

GenomicRanges 1.40.0

Bioconductor Package Maintainer

WARNINGS

GenomicScores 2.0.0

Robert Castelo

GenomicTuples 1.22.1

Peter Hickey

~~Genominator~~ 1.42.0

James Bullard

ERROR

skipped

genoset 1.44.0

Peter M. Haverty

WARNINGS

genotypeeval 1.20.0

Jennifer Tom

genphen 1.16.0

Simo Kitanovski

GenRank 1.16.0

Chakravarthi Kanduri

ERROR

skipped

GenVisR 1.20.0

Zachary Skidmore

GEOmetadb 1.50.0

Jack Zhu

WARNINGS

GEOquery 2.56.0

Sean Davis

GEOsubmission 1.40.0

Alexandre Kuhn

gep2pep 1.8.0

Francesco Napolitano

gespeR 1.20.0

Fabian Schmich

WARNINGS

GEWIST 1.32.0

Wei Q. Deng

GGBase 3.50.0

VJ Carey

ggbio 1.36.0

Michael Lawrence

WARNINGS

ggcyto 1.16.0

Mike Jiang ,Jake Wagner

GGPA 1.0.0

Dongjun Chung

GGtools 5.24.0

VJ Carey

ERROR

ggtree 2.2.4

Guangchuang Yu

GIGSEA 1.6.0

Shijia Zhu

girafe 1.40.0

J. Toedling

GISPA 1.12.0

Bhakti Dwivedi

GLAD 2.52.0

Philippe Hupe

GladiaTOX 1.4.0

PMP S.A. R Support

Glimma 1.16.0

Shian Su

glmGamPoi 1.0.0

Constantin Ahlmann-Eltze

glmSparseNet 1.6.0

André Veríssimo

GlobalAncova 4.6.0

Manuela Hummel

globalSeq 1.16.1

Armin Rauschenberger

globaltest 5.42.0

Jelle Goeman

gmapR 1.30.0

Michael Lawrence

WARNINGS

GmicR 1.2.0

Richard Virgen-Slane

gmoviz 1.0.1

Kathleen Zeglinski

GMRP 1.16.0

Yuan-De Tan

WARNINGS

GNET2 1.4.0

Chen Chen

GOexpress 1.22.0

Kevin Rue-Albrecht

GOfuncR 1.8.0

Steffi Grote

GOFunction 1.36.0

Jing Wang

ERROR

skipped

GOpro 1.14.0

Lidia Chrabaszcz

WARNINGS

goProfiles 1.50.0

Alex Sanchez

GOSemSim 2.14.2

Guangchuang Yu

goseq 1.40.0

Matthew Young , Nadia Davidson

GOSim 1.26.0

Holger Froehlich

goSTAG 1.12.1

Brian D. Bennett

GOstats 2.54.0

Bioconductor Package Maintainer

GOsummaries 2.24.0

Raivo Kolde

GOTHiC 1.24.0

Borbala Mifsud

goTools 1.62.0

Agnes Paquet

GPA 1.0.0

Dongjun Chung

gpart 1.6.0

Sun Ah Kim

gpls 1.60.0

Bioconductor Package Maintainer

WARNINGS

gprege 1.32.0

Alfredo Kalaitzis

gpuMagic 1.4.0

Jiefei Wang

gQTLBase 1.20.4

VJ Carey

gQTLstats 1.20.0

VJ Carey

gramm4R 1.2.0

Tianlu Chen

graper 1.4.0

Britta Velten

graph 1.66.0

Bioconductor Package Maintainer

GraphAlignment 1.52.0

Joern P. Meier

GraphAT 1.60.0

Thomas LaFramboise

graphite 1.34.0

Gabriele Sales

GraphPAC 1.30.0

Gregory Ryslik

GRENITS 1.40.0

Edward Morrissey

GreyListChIP 1.20.0

Gordon Brown

GRmetrics 1.14.0

Nicholas Clark , Mario Medvedovic

groHMM 1.22.0

Anusha Nagari , Tulip Nandu , W. Lee Kraus

GRridge 1.12.0

Mark A. van de Wiel

WARNINGS

GSALightning 1.16.0

Billy Heung Wing Chang

GSAR 1.22.0

Yasir Rahmatallah , Galina Glazko

GSCA 2.18.0

Zhicheng Ji

ERROR

gscreend 1.2.0

Katharina Imkeller

GSEABase 1.50.1

Bioconductor Package Maintainer

GSEABenchmarkeR 1.8.0

Ludwig Geistlinger

GSEAlm 1.48.0

Assaf Oron

gsean 1.8.0

Dongmin Jung

GSReg 1.22.0

Bahman Afsari , Elana J. Fertig

WARNINGS

GSRI 2.36.0

Julian Gehring

GSVA 1.36.3

Justin Guinney

gtrellis 1.20.1

Zuguang Gu

GUIDEseq 1.18.0

Lihua Julie Zhu

Guitar 2.4.0

Jia Meng

Gviz 1.32.0

Robert Ivanek

gwascat 2.20.1

VJ Carey

GWASTools 1.34.0

Stephanie M. Gogarten

gwasurvivr 1.6.0

Abbas Rizvi

h5vc 2.22.0

Paul Theodor Pyl

hapFabia 1.30.0

Andreas Mitterecker

Harman 1.16.0

Jason Ross

Harshlight 1.60.0

Maurizio Pellegrino

HCABrowser 1.4.0

Bioconductor Package Maintainer

HCAExplorer 1.2.0

Bioconductor Package Maintainer

WARNINGS

HDF5Array 1.16.1

Hervé Pagès

HDTD 1.22.0

Anestis Touloumis

heatmaps 1.12.0

Malcolm Perry

Heatplus 2.34.0

Alexander Ploner

HelloRanges 1.14.0

Michael Lawrence

HELP 1.46.0

Reid F. Thompson

HEM 1.60.0

HyungJun Cho

hiAnnotator 1.22.0

Nirav V Malani

HIBAG 1.24.0

Xiuwen Zheng

HiCBricks 1.6.0

Koustav Pal

HiCcompare 1.10.0

John Stansfield

hicrep 1.12.0

Tao Yang

ERROR

skipped

hierGWAS 1.18.0

Laura Buzdugan

hierinf 1.6.0

Claude Renaux

HilbertCurve 1.18.0

Zuguang Gu

HilbertVis 1.46.0

Simon Anders

WARNINGS

HilbertVisGUI

...NOT SUPPORTED...

HiLDA 1.2.0

Zhi Yang

hipathia 2.4.0

Marta R. Hidalgo

HIPPO 1.0.0

Tae Kim

hiReadsProcessor 1.24.0

Nirav V Malani

HIREewas 1.6.0

Xiangyu Luo

HiTC 1.32.0

Nicolas Servant

hmdbQuery 1.8.0

VJ Carey

HMMcopy 1.30.0

Daniel Lai , Sohrab Shah

hopach 2.48.0

Katherine S. Pollard

HPAanalyze 1.6.0

Anh Nhat Tran

hpar 1.30.0

Laurent Gatto

HTqPCR 1.42.0

Heidi Dvinge

HTSeqGenie

...NOT SUPPORTED...

HTSFilter 1.28.0

Andrea Rau

HumanTranscriptomeCompendium 1.4.0

VJ Carey

HybridMTest 1.32.0

Demba Fofana

hypeR 1.4.0

Anthony Federico

WARNINGS

hyperdraw 1.40.0

Paul Murrell

hypergraph 1.60.0

Bioconductor Package Maintainer

iASeq 1.32.0

Yingying Wei

iasva 1.6.0

Donghyung Lee , Anthony Cheng

iBBiG 1.32.0

Aedin Culhane

ibh 1.36.0

Kircicegi Korkmaz

iBMQ

...NOT SUPPORTED...

iCARE 1.16.0

Bill Wheeler

WARNINGS

Icens 1.60.0

Bioconductor Package Maintainer

icetea 1.6.1

Vivek Bhardwaj

iCheck 1.18.0

Weiliang Qiu

WARNINGS

iChip 1.42.0

Qianxing Mo

iClusterPlus 1.24.0

Qianxing Mo , Ronglai Shen

WARNINGS

iCNV 1.8.0

Zilu Zhou

WARNINGS

iCOBRA 1.16.0

Charlotte Soneson

ideal 1.12.1

Federico Marini

IdeoViz 1.24.0

Shraddha Pai

WARNINGS

idiogram 1.64.0

Karl J. Dykema

~~IdMappingAnalysis~~ 1.32.0

Alex Lisovich , Roger Day

ERROR

skipped

~~IdMappingRetrieval~~ 1.36.0

Alex Lisovich , Roger Day

ERROR

idr2d 1.2.2

Konstantin Krismer

iGC 1.18.0

Liang-Bo Wang

IgGeneUsage 1.2.2

Simo Kitanovski

igvR 1.8.2

Paul Shannon

WARNINGS

IHW 1.16.0

Nikos Ignatiadis

illuminaio 0.30.0

Kasper Daniel Hansen

imageHTS 1.38.0

Joseph Barry

IMAS 1.12.0

Seonggyun Han

Imetagene 1.18.0

Audrey Lemacon

ERROR

skipped

IMMAN 1.8.2

Minoo Ashtiani

ERROR

skipped

ImmuneSpaceR 1.16.0

ImmuneSpace Package Maintainer

immunoClust 1.20.1

Till Soerensen

WARNINGS

IMPCdata 1.24.0

Jeremy Mason

ImpulseDE 1.14.0

Jil Sander , Nir Yosef

ERROR

ImpulseDE2 1.12.0

David S Fischer

ERROR

impute 1.62.0

Balasubramanian Narasimhan

INDEED 2.2.0

Ressom group

infercnv 1.4.0

Christophe Georgescu

InPAS 1.20.0

Jianhong Ou

INPower 1.24.0

Bill Wheeler

INSPEcT 1.18.1

Stefano de Pretis

InTAD 1.8.0

Konstantin Okonechnikov

intansv 1.28.0

Wen Yao

InteractionSet 1.16.0

Aaron Lun

interactiveDisplay 1.26.0

Shawn Balcome

WARNINGS

interactiveDisplayBase 1.26.3

Shawn Balcome

IntEREst 1.12.0

Ali Oghabian , Mikko Frilander

InterMineR 1.10.0

InterMine Team

WARNINGS

IntramiRExploreR 1.10.0

Surajit Bhattacharya

inveRsion 1.36.0

Alejandro Caceres

IONiseR 2.12.0

Mike Smith

iPAC 1.32.0

Gregory Ryslik

ipdDb 1.6.0

Steffen Klasberg

IPO 1.14.0

Thomas Riebenbauer

~~IPPD~~ 1.36.0

Martin Slawski

ERROR

IRanges 2.22.2

Bioconductor Package Maintainer

WARNINGS

iSEE 2.0.0

Charlotte Soneson

WARNINGS

iSEEu 1.0.1

Kevin Rue-Albrecht

iSeq 1.40.0

Qianxing Mo

isobar 1.34.0

Florian P Breitwieser

WARNINGS

IsoCorrectoR 1.6.2

Christian Kohler

IsoCorrectoRGUI 1.4.0

Christian Kohler

IsoformSwitchAnalyzeR 1.10.0

Kristoffer Vitting-Seerup

IsoGeneGUI 2.24.0

Setia Pramana

ISoLDE 1.16.0

Christelle Reynès

ERROR

isomiRs 1.16.2

Lorena Pantano

ITALICS 2.48.0

Guillem Rigaill

iterativeBMA 1.46.0

Ka Yee Yeung

iterativeBMAsurv 1.46.0

Ka Yee Yeung

iterClust 1.10.0

Hongxu Ding

iteremoval 1.8.0

Jiacheng Chuan

IVAS 2.8.0

Seonggyun Han

WARNINGS

ivygapSE 1.10.0

VJ Carey

IWTomics 1.12.0

Marzia A Cremona

WARNINGS

joda 1.36.0

Ewa Szczurek

ERROR

JunctionSeq 1.18.0

Stephen Hartley

ERROR

karyoploteR 1.14.1

Bernat Gel

KCsmart 2.46.0

Jorma de Ronde

WARNINGS

kebabs 1.22.0

Ulrich Bodenhofer

WARNINGS

KEGGgraph 1.48.0

Jitao David Zhang

KEGGlincs 1.14.0

Shana White , Mario Medvedovic

keggorthology 2.40.0

VJ Carey

KEGGprofile 1.30.0

Shilin Zhao

KEGGREST 1.28.0

Bioconductor Package Maintainer

~~kimod~~ 1.16.0

M L Zingaretti

ERROR

KinSwingR 1.6.0

Ashley J. Waardenberg

kissDE 1.8.0

Aurélie Siberchicot

KnowSeq 1.2.2

Daniel Castillo-Secilla

LACE 1.0.0

Davide Maspero

lapmix 1.54.0

Yann Ruffieux

LBE 1.56.0

Cyril Dalmasso

ldblock 1.18.0

VJ Carey

LEA 3.0.0

Olivier Francois

LedPred 1.22.0

Aitor Gonzalez

les 1.38.0

Julian Gehring

levi 1.6.0

Jose Luiz Rybarczyk Filho

lfa 1.18.0

Wei Hao , John D. Storey

WARNINGS

limma 3.44.3

Gordon Smyth

limmaGUI 1.64.0

Gordon Smyth

LINC 1.16.0

Manuel Goepferich

ERROR

LineagePulse 1.8.0

David S Fischer

WARNINGS

LinkHD 1.2.0

"Laura M Zingaretti"

Linnorm 2.12.0

Ken Shun Hang Yip

lionessR 1.2.0

Ping-Han Hsieh

lipidr 2.2.0

Ahmed Mohamed

LiquidAssociation 1.42.0

Yen-Yi Ho

lmdme 1.30.0

Cristobal Fresno

WARNINGS

~~LMGene~~ 2.44.0

Blythe Durbin-Johnson

ERROR

LOBSTAHS 1.14.0

James Collins

WARNINGS

loci2path 1.8.0

Tianlei Xu

logicFS 2.8.0

Holger Schwender

logitT 1.46.0

Tobias Guennel

Logolas 1.12.0

Kushal Dey

ERROR

~~lol~~ 1.36.0

Yinyin Yuan

ERROR

skipped

LOLA 1.18.1

Nathan Sheffield

LoomExperiment 1.6.0

Bioconductor Package Maintainer

LowMACA 1.18.0

Stefano de Pretis , Giorgio Melloni

LPE 1.62.0

Nitin Jain

LPEadj 1.48.0

Carl Murie

lpNet 2.20.0

Lars Kaderali

WARNINGS

lpsymphony 1.16.0

Vladislav Kim

LRBaseDbi 1.6.0

Koki Tsuyuzaki

lumi 2.40.0

Lei Huang

WARNINGS

~~LVSmiRNA~~ 1.38.0

Stefano Calza

ERROR

skipped

LymphoSeq 1.16.0

David Coffey

M3C 1.10.0

Christopher John

~~M3D~~ 1.22.0

Tom Mayo

WARNINGS

M3Drop 1.14.0

Tallulah Andrews

maanova 1.58.0

Keith Sheppard

WARNINGS

Maaslin2 1.2.0

Lauren McIver

macat 1.62.0

Joern Toedling

maCorrPlot 1.58.0

Alexander Ploner

MACPET 1.8.0

Ioannis Vardaxis

MACSQuantifyR 1.2.0

Raphaël Bonnet

made4 1.62.0

Aedin Culhane

ERROR

MADSEQ 1.14.0

Yu Kong

maftools 2.4.12

Anand Mayakonda

MAGeCKFlute 1.8.0

Wubing Zhang

ERROR

skipped

maigesPack 1.52.0

Gustavo H. Esteves

MAIT 1.22.1

Pol Sola-Santos

makecdfenv 1.64.0

James W. MacDonald

MANOR 1.60.0

Pierre Neuvial

~~manta~~ 1.34.0

Chris Berthiaume , Adrian Marchetti

ERROR

skipped

MantelCorr 1.58.0

Brian Steinmeyer

mAPKL 1.18.0

Argiris Sakellariou

WARNINGS

maPredictDSC 1.26.0

Adi Laurentiu Tarca

mapscape 1.12.0

Maia Smith

WARNINGS

marray 1.66.0

Yee Hwa (Jean) Yang

martini 1.8.0

Hector Climente-Gonzalez

maser 1.6.0

Diogo F.T. Veiga

maSigPro 1.60.0

Maria Jose Nueda

maskBAD 1.32.0

Michael Dannemann

MassArray 1.40.0

Reid F. Thompson

massiR 1.24.0

Sam Buckberry

MassSpecWavelet 1.54.0

Pan Du

MAST 1.14.0

Andrew McDavid

matchBox 1.30.0

Luigi Marchionni , Anuj Gupta

MatrixGenerics 1.0.2

Peter Hickey

MatrixRider 1.20.0

Elena Grassi

matter 1.14.0

Kylie A. Bemis

~~MaxContrastProjection~~ 1.12.0

Jan Sauer

ERROR

MBAmethyl 1.22.0

Tao Wang

MBASED 1.22.0

Oleg Mayba

MBCB 1.42.0

Jeff Allen

mbkmeans 1.4.1

Davide Risso

mBPCR 1.42.0

P.M.V. Rancoita

MBQN 2.0.3

Ariane Schad

MBttest 1.16.0

Yuan-De Tan

mcaGUI 1.36.0

Wade K. Copeland

ERROR

MCbiclust 1.12.0

Robert Bentham

~~MCRestimate~~ 2.44.0

Marc Johannes

ERROR

skipped

mCSEA 1.8.0

Jordi Martorell-Marugán

mdgsa 1.20.0

David Montaner

mdp 1.8.0

Helder Nakaya

mdqc 1.50.0

Gabriela Cohen-Freue

MDTS 1.8.0

Jack M.. Fu

MEAL 1.18.0

Carlos Ruiz-Arenas

WARNINGS

MeasurementError.cor 1.60.0

Beiying Ding

MEAT 1.0.4

Sarah Voisin

MEB 1.2.0

Jiadi Zhu

MEDIPS 1.40.0

Lukas Chavez

MEDME 1.48.0

Mattia Pelizzola

WARNINGS

MEIGOR 1.22.0

Jose A. Egea

WARNINGS

Melissa 1.4.1

C. A. Kapourani

~~MergeMaid~~ 2.60.0

Xiaogang Zhong

ERROR

Mergeomics 1.16.0

Zeyneb Kurt

MeSHDbi 1.24.0

Koki Tsuyuzaki

meshes 1.14.0

Guangchuang Yu

meshr 1.24.1

Koki Tsuyuzaki

messina 1.24.0

Mark Pinese

metaArray 1.66.0

Hyungwon Choi

WARNINGS

Metab 1.22.0

Raphael Aggio

metabomxtr 1.22.0

Michael Nodzenski

MetaboSignal 1.18.0

Andrea Rodriguez-Martinez

metaCCA 1.16.0

Anna Cichonska

WARNINGS

MetaCyto 1.10.0

Zicheng Hu

metagene 2.20.0

Charles Joly Beauparlant

metagene2 1.4.0

Eric Fournier

metagenomeFeatures 2.8.0

Nathan D. Olson

metagenomeSeq 1.30.0

Joseph N. Paulson

metahdep 1.46.0

John R. Stevens

WARNINGS

metaMS 1.24.0

Yann Guitton

MetaNeighbor 1.8.0

Manthan Shah

metaSeq 1.28.0

Koki Tsuyuzaki

metaseqR 1.28.0

Panagiotis Moulos

WARNINGS

metaseqR2 1.0.11

Panagiotis Moulos

metavizr 1.12.0

Hector Corrada Bravo

MetaVolcanoR 1.2.0

Cesar Prada

MetCirc 1.18.0

Thomas Naake

MethCP 1.2.0

Boying Gong

methimpute 1.10.0

Aaron Taudt

methInheritSim 1.10.0

Pascal Belleau

MethPed 1.16.0

Helena Carén

methrix 1.2.06

Anand Mayakonda

MethTargetedNGS 1.20.0

Muhammad Ahmer Jamil

methVisual 1.40.0

Arie Zackay

ERROR

methyAnalysis 1.30.0

Lei Huang

WARNINGS

MethylAid 1.22.0

L.J.Sinke

methylCC 1.2.0

Stephanie C. Hicks

methylGSA 1.6.1

Xu Ren

methylInheritance 1.12.0

Astrid Deschenes

methylKit 1.14.2

Altuna Akalin , Alexander Gosdschan

MethylMix 2.18.0

Olivier Gevaert

methylMnM 1.26.0

Yan Zhou

methylPipe 1.22.0

Kamal Kishore

WARNINGS

MethylSeekR 1.28.0

Lukas Burger

methylSig 1.0.0

Raymond G. Cavalcante

methylumi 2.34.0

Sean Davis

WARNINGS

methyvim 1.10.0

Nima Hejazi

ERROR

skipped

MetID 1.6.0

Zhenzhi Li

MetNet 1.6.0

Thomas Naake

mfa 1.10.0

Kieran Campbell

Mfuzz 2.48.0

Matthias Futschik

MGFM 1.22.0

Khadija El Amrani

MGFR 1.14.0

Khadija El Amrani

mgsa 1.36.0

Sebastian Bauer

MiChip 1.42.0

Jonathon Blake

microbiome 1.10.0

Leo Lahti

microbiomeDASim 1.2.0

Justin Williams

MicrobiotaProcess 1.0.5

Shuangbin Xu

microRNA 1.46.0

"James F. Reid"

MIGSA 1.12.0

Juan C. Rodriguez

mimager 1.12.0

Aaron Wolen

MIMOSA 1.26.0

Greg Finak

MineICA 1.28.0

Anne Biton

WARNINGS

minet 3.46.0

Patrick E. Meyer

minfi 1.34.0

Kasper Daniel Hansen

MinimumDistance 1.32.0

Robert B Scharpf

WARNINGS

MiPP 1.60.0

Sukwoo Kim

MIRA 1.10.0

John Lawson

MiRaGE 1.30.0

Y-h. Taguchi

miRBaseConverter 1.12.0

Taosheng Xu

miRcomp 1.18.0

Matthew N. McCall

WARNINGS

mirIntegrator 1.18.0

Diana Diaz

miRLAB 1.18.0

Thuc Duy Le

miRmine 1.10.0

Dusan Randjelovic

miRNAmeConverter 1.16.0

Stefan J. Haunsberger

WARNINGS

miRNApath 1.48.0

James M. Ward

miRNAtap 1.22.0

T. Ian Simpson

miRSM 1.6.4

Junpeng Zhang

miRspongeR 1.14.0

Junpeng Zhang

Mirsynergy 1.24.0

Yue Li

ERROR

missMethyl 1.22.0

Belinda Phipson

missRows 1.8.0

Gonzalez Ignacio

mitch 1.0.10

Mark Ziemann

~~mitoODE~~ 1.26.1

Gregoire Pau

WARNINGS

mixOmics 6.12.2

Kim-Anh Le Cao

MLInterfaces 1.68.0

V. Carey

MLP 1.36.0

Tobias Verbeke

MLSeq 2.6.0

Gokmen Zararsiz

MMAPPR2 1.2.0

Jonathon Hill

MMDiff2 1.16.0

Gabriele Schweikert

MmPalateMiRNA 1.38.0

Guy Brock

ERROR

MMUPHin 1.2.0

Siyuan MA

ERROR

skipped

mnem 1.4.5

Martin Pirkl

MODA 1.14.0

Dong Li

Modstrings 1.4.1

Felix G.M. Ernst

MOFA 1.4.0

Britta Velten

mogsa 1.22.1

Chen Meng

MOMA 1.0.2

Sunny Jones

monocle 2.16.0

Cole Trapnell

MoonlightR 1.14.1

Antonio Colaprico

WARNINGS

~~MoPS~~ 1.22.0

Philipp Eser

ERROR

skipped

mosaics 2.26.0

Dongjun Chung

MOSim 1.2.0

Carlos Martínez

motifbreakR 2.2.0

Simon Gert Coetzee

WARNINGS

motifcounter 1.12.0

Wolfgang Kopp

MotifDb 1.30.0

Paul Shannon

WARNINGS

motifmatchr 1.10.0

Alicia Schep

~~motifRG~~ 1.32.0

Zizhen Yao

ERROR

skipped

motifStack 1.32.1

Jianhong Ou

MotIV 1.44.0

Eloi Mercier , Raphael Gottardo

ERROR

MPFE 1.24.1

Conrad Burden

mpra 1.10.0

Leslie Myint

MPRAnalyze 1.6.0

Tal Ashuach

msa 1.20.1

Ulrich Bodenhofer

WARNINGS

MsCoreUtils 1.0.0

RforMassSpectrometry Package Maintainer

msgbsR 1.12.0

Benjamin Mayne

WARNINGS

MSGFgui 1.22.0

Thomas Lin Pedersen

ERROR

skipped

MSGFplus 1.22.0

Thomas Lin Pedersen

ERROR

skipped

msmsEDA 1.26.0

Josep Gregori

msmsTests 1.26.0

Josep Gregori i Font

MSnbase 2.14.2

Laurent Gatto

MSnID 1.22.0

Vlad Petyuk

WARNINGS

msPurity 1.14.1

Thomas N. Lawson

MSstats 3.20.3

Meena Choi

MSstatsQC 2.6.0

Eralp Dogu

MSstatsQCgui 1.8.0

Eralp Dogu

MSstatsSampleSize 1.2.0

Ting Huang

WARNINGS

MSstatsTMT 1.6.6

Ting Huang

~~MTseeker~~ 1.6.0

Tim Triche

ERROR

skipped

Mulcom 1.38.0

Claudio Isella

WARNINGS

MultiAssayExperiment 1.14.0

Marcel Ramos

multiClust 1.18.0

Nathan Lawlor

MultiDataSet 1.16.0

Carlos Ruiz-Arenas

multiHiCcompare 1.6.0

John Stansfield

MultiMed 2.10.0

Simina M. Boca

multiMiR 1.10.0

Matt Mulvahill

multiOmicsViz 1.12.0

Jing Wang

multiscan 1.48.0

Mizanur Khondoker

multtest 2.44.0

Katherine S. Pollard

WARNINGS

muscat 1.2.1

Helena L. Crowell

muscle 3.30.0

Alex T. Kalinka

MutationalPatterns 2.0.0

Rurika Oka

MVCClass 1.62.0

Elizabeth Whalen

MWASTools 1.12.0

Andrea Rodriguez-Martinez , Rafael Ayala

mygene 1.24.0

Adam Mark, Cyrus Afrasiabi, Chunlei Wu

myvariant 1.18.0

Adam Mark, Chunlei Wu

mzID 1.26.0

Laurent Gatto

mzR 2.22.0

Steffen Neumann

WARNINGS

NADfinder 1.12.0

Jianhong Ou

NanoStringDiff 1.18.0

tingting zhai ,hong wang

WARNINGS

NanoStringQCPro 1.20.0

Robert Ziman

nanotatoR 1.4.0

Surajit Bhattacharya

NarrowPeaks 1.32.0

Pedro Madrigal

ERROR

skipped

NBAMSeq 1.4.1

Xu Ren

NBSplice 1.6.0

Gabriela Merino

ncdfFlow 2.34.0

Mike Jiang , Jake Wagner

WARNINGS

ncGTW 1.2.0

Chiung-Ting Wu

NCIgraph

...NOT SUPPORTED...

ndexr 1.10.0

Florian Auer

NeighborNet 1.6.0

Sahar Ansari

~~nem~~ 2.62.0

Holger Froehlich

ERROR

netbenchmark 1.20.0

Pau Bellot

ERROR

skipped

netbiov 1.22.0

Shailesh tripathi

WARNINGS

netboost 1.4.0

Pascal Schlosser

netboxr 1.0.1

Eirc Minwei Liu

netDx 1.0.4

Shraddha Pai

ERROR

skipped

nethet 1.20.1

Nicolas Staedler

WARNINGS

NetPathMiner 1.24.0

Ahmed Mohamed

WARNINGS

netprioR 1.14.0

Fabian Schmich

netReg 1.12.0

Simon Dirmeier

ERROR

skipped

netresponse 1.48.0

Leo Lahti

NetSAM 1.28.0

Bing Zhang

netSmooth 1.8.0

Jonathan Ronen

networkBMA 2.28.0

Ka Yee Yeung

WARNINGS

ngsReports 1.4.2

Steve Pederson

nnNorm 2.52.0

Adi Laurentiu Tarca

NOISeq 2.32.0

Sonia Tarazona

ERROR

skipped

nondetects 2.18.0

Valeriia Sherina

NoRCE 1.0.0

Gulden Olgun

normalize450K 1.16.0

Jonathan Alexander Heiss

NormalyzerDE 1.6.0

Jakob Willforss

NormqPCR 1.34.0

James Perkins

WARNINGS

normr 1.14.0

Johannes Helmuth

NPARC 1.0.1

Nils Kurzawa

npGSEA 1.24.0

Jessica Larson

NTW 1.38.0

Yuanhua Liu

WARNINGS

nucleoSim 1.16.0

Astrid Deschenes

nucleR 2.20.0

Diego Gallego

ERROR

skipped

nuCpos 1.6.0

Hiroaki Kato

NuPoP 1.38.0

Ji-Ping Wang

occugene 1.48.0

Oliver Will

OCplus 1.62.0

Alexander Ploner

odseq 1.16.0

José Jiménez

OGSA 1.18.0

Michael F. Ochs

ERROR

oligo 1.52.1

Benilton Carvalho

WARNINGS

oligoClasses 1.50.4

Benilton Carvalho and Robert Scharpf

WARNINGS

OLIN 1.66.0

Matthias Futschik

OLINgui 1.62.0

Matthias Futschik

OmaDB 2.4.0

Klara Kaleb , Adrian Altenhoff

WARNINGS

omicade4 1.28.2

Chen Meng

OmicCircos 1.26.0

Ying Hu

WARNINGS

omicplotR 1.8.0

Daniel Giguere

omicRexposome 1.10.0

Carles Hernandez-Ferrer

OmicsLonDA 1.4.0

Ahmed A. Metwally

OmicsMarkeR 1.20.0

Charles E. Determan Jr.

ERROR

OMICsPCA 1.6.0

Subhadeep Das

WARNINGS

omicsPrint 1.8.0

Davy Cats

OmnipathR 1.2.1

Alberto Valdeolivas Urbelz

Onassis 1.10.0

Eugenia Galeota

oncomix 1.10.0

Daniel Pique

OncoScore 1.16.0

Luca De Sano

OncoSimulR 2.18.0

Ramon Diaz-Uriarte

oneSENSE 1.10.0

Yong Kee Tan

WARNINGS

onlineFDR 1.6.0

David S. Robertson

ontoProc 1.10.1

VJ Carey

ERROR

openCyto 2.0.0

Mike Jiang ,Jake Wagner

openPrimeR 1.10.4

Matthias Döring

openPrimeRui 1.10.0

Matthias Döring

OpenStats 1.0.2

Hamed Haseli Mashhadi

oposSOM 2.6.0

Henry Loeffler-Wirth

WARNINGS

oppar 1.16.0

Soroor Hediyeh zadeh

oppti 1.2.0

Abdulkadir Elmas

optimalFlow 1.0.1

Hristo Inouzhe

WARNINGS

OPWeight 1.10.0

Mohamad Hasan

OrderedList 1.60.1

Claudio Lottaz

ORFik 1.8.6

Haakon Tjeldnes

Organism.dplyr 1.16.0

Martin Morgan

OrganismDbi 1.30.0

Bioconductor Package Maintainer

WARNINGS

OSAT 1.36.0

Li Yan

Oscope 1.18.0

Ning Leng

OTUbase 1.38.0

Daniel Beck

ERROR

skipped

OutlierD 1.52.0

Sukwoo Kim

ERROR

skipped

OUTRIDER 1.6.1

Christian Mertes

ERROR

skipped

OVESEG 1.4.0

Lulu Chen

PAA 1.22.0

Michael Turewicz , Martin Eisenacher

packFinder 1.0.0

Jack Gisby

PADOG 1.30.0

Adi Laurentiu Tarca

PAIRADISE 1.4.1

Qiang Hu , Levon Demirdjian

paircompviz 1.26.0

Michal Burda

pandaR 1.20.0

Joseph N. Paulson , Dan Schlauch

WARNINGS

panelcn.mops 1.10.0

Gundula Povysil

panp 1.58.0

Peter Warren

PANR 1.34.0

Xin Wang

PanVizGenerator 1.16.0

Thomas Lin Pedersen

~~PAPi~~ 1.28.0

Raphael Aggio

ERROR

parglms 1.20.0

VJ Carey

parody 1.46.0

VJ Carey

PAST 1.4.3

Thrash Adam

WARNINGS

Path2PPI 1.18.0

Oliver Philipp

pathifier 1.26.0

Assif Yitzhaky

PathNet 1.28.0

Ludwig Geistlinger

PathoStat 1.14.0

Solaiappan Manimaran

pathprint 1.18.0

Sokratis Kariotis

ERROR

pathRender 1.56.0

Vince Carey

pathVar 1.18.0

Samuel Zimmerman

pathview 1.28.1

Weijun Luo

WARNINGS

pathwayPCA 1.4.0

Gabriel Odom

PathwaySplice 1.12.0

Aimin Yan

ERROR

skipped

paxtoolsr 1.22.0

Augustin Luna

ERROR

pcaExplorer 2.14.2

Federico Marini

~~pcaGoPromoter~~ 1.32.0

Morten Hansen

ERROR

pcaMethods 1.80.0

Henning Redestig

PCAN 1.16.0

Matthew Page and Patrice Godard

PCAtools 2.0.0

Kevin Blighe

pcot2 1.56.0

Sarah Song

PCpheno 1.50.0

Nolwenn Le Meur

pcxn 2.10.0

Sokratis Kariotis

pdInfoBuilder 1.52.0

Benilton Carvalho

peakPantheR 1.2.0

Arnaud Wolfer

PECA 1.24.0

Tomi Suomi

peco 1.0.0

Chiaowen Joyce Hsiao

PepsNMR 1.6.1

Manon Martin

pepStat 1.22.0

Gregory C Imholte

pepXMLTab 1.22.0

Xiaojing Wang

PERFect 1.2.0

Quy Cao

perturbatr 1.8.0

Simon Dirmeier

PGA 1.18.1

Bo Wen , Shaohang Xu

pgca 1.12.0

Gabriela Cohen-Freue

PGSEA 1.62.0

Karl Dykema

ERROR

phantasus 1.8.0

Alexey Sergushichev

WARNINGS

PharmacoGx 2.0.9

Benjamin Haibe-Kains

phemd 1.4.0

William S Chen

phenopath 1.12.0

Kieran Campbell

phenoTest 1.36.0

Evarist Planet

PhenStat 2.24.0

Hamed Haselimashhadi

philr 1.14.0

Justin Silverman

phosphonormalizer 1.12.0

Sohrab Saraei

PhyloProfile 1.2.8

Vinh Tran

phyloseq 1.32.0

Paul J. McMurdie

Pi 2.0.3

Hai Fang

piano 2.4.0

Leif Varemo Wigge

ERROR

pickgene 1.60.0

Brian S. Yandell

WARNINGS

PICS 2.32.0

Renan Sauteraud

Pigengene 1.14.0

Habil Zare

ERROR

skipped

PING 2.32.0

Renan Sauteraud

WARNINGS

~~pint~~ 1.38.0

Olli-Pekka Huovilainen

ERROR

skipped

pipeFrame 1.4.0

Zheng Wei

pkgDepTools 1.54.0

Bioconductor Package Maintainer

plethy 1.26.0

Daniel Bottomly

plgem 1.60.0

Norman Pavelka

plier 1.58.0

Crispin Miller

WARNINGS

PloGO2 1.0.0

Jemma Wu , Dana Pascovici

plotGrouper 1.6.0

John D. Gagnon

PLPE 1.48.0

Soo-heang Eo

plrs 1.28.0

Gwenael G.R. Leday to

ERROR

~~plw~~ 1.48.0

Magnus Astrand

ERROR

plyranges 1.8.0

Stuart Lee

pmm 1.20.0

Anna Drewek

pmp 1.0.0

Andris Jankevics

podkat 1.20.0

Ulrich Bodenhofer

pogos 1.8.0

VJ Carey

polyester 1.24.0

Jack Fu , Jeff Leek

Polyfit 1.22.0

Conrad Burden

WARNINGS

POST 1.12.0

Xueyuan Cao

WARNINGS

PoTRA 1.4.0

Valentin Dinu

~~PowerExplorer~~ 1.8.0

Xu Qiao

ERROR

skipped

powerTCR 1.8.0

Hillary Koch

PPInfer 1.14.0

Dongmin Jung

ppiStats 1.54.0

Bioconductor Package Maintainer

pqsfinder 2.4.0

Jiri Hon

prada 1.64.0

Florian Hahne

ERROR

pram 1.4.0

Peng Liu

prebs 1.28.0

Karolis Uziela

PrecisionTrialDrawer 1.4.0

Giorgio Melloni

PREDA 1.34.0

Francesco Ferrari

WARNINGS

predictionet 1.34.0

Benjamin Haibe-Kains

preprocessCore 1.50.0

Ben Bolstad

WARNINGS

primirTSS 1.6.1

Pumin Li

WARNINGS

PrInCE 1.4.0

Michael Skinnider

Prize 1.18.0

Daryanaz Dargahi

ERROR

proBAMr 1.22.0

Xiaojing Wang

proBatch 1.4.0

Chloe H. Lee

PROcess 1.64.0

Xiaochun Li

procoil 2.16.0

Ulrich Bodenhofer

proDA 1.2.0

Constantin Ahlmann-Eltze

proFIA 1.14.0

Alexis Delabriere

WARNINGS

profileplyr 1.4.3

Tom Carroll , Doug Barrows

profileScoreDist 1.16.0

Paal O. Westermark

progeny 1.10.0

Alberto Valdeolivas

projectR 1.4.0

Genevieve Stein-O'Brien

pRoloc 1.28.0

Laurent Gatto

pRolocGUI 1.22.0

Laurent Gatto

PROMISE 1.40.0

Stan Pounds , Xueyuan Cao

PROPER 1.20.0

Hao Wu

WARNINGS

PROPS 1.10.0

Lichy Han

Prostar 1.20.0

Samuel Wieczorek

proteinProfiles 1.28.0

Julian Gehring

ProteomicsAnnotationHubData 1.18.0

Laurent Gatto

ProteoMM 1.6.0

Yuliya V Karpievitch

~~proteoQC~~ 1.24.0

Bo Wen

ERROR

skipped

ProtGenerics 1.20.0

Laurent Gatto

PSEA 1.22.0

Alexandre Kuhn

psichomics 1.14.4

Nuno Saraiva-Agostinho

PSICQUIC 1.26.1

Paul Shannon

ERROR

skipped

psygenet2r 1.20.0

Alba Gutierrez-Sacristan

ERROR

skipped

PubScore 1.0.0

Tiago Lubiana

pulsedSilac 1.2.0

Marc Pagès-Gallego

puma 3.30.0

Xuejun Liu

WARNINGS

PureCN 1.18.1

Markus Riester

pvac 1.36.0

Jun Lu , Pierre R. Bushel

pvca 1.28.0

Jianying LI

Pviz 1.22.0

Renan Sauteraud

PWMEnrich 4.24.2

Diego Diez

pwOmics 1.20.0

Maren Sitte

WARNINGS

pwrEWAS 1.2.0

Stefan Graw

qckitfastq 1.4.0

August Guang

qcmetrics 1.26.0

Laurent Gatto

QDNAseq 1.24.0

Daoud Sie

qpcrNorm 1.46.0

Jessica Mar

qpgraph 2.22.0

Robert Castelo

qPLEXanalyzer 1.6.0

Ashley Sawle

qrqc 1.42.0

Vince Buffalo

WARNINGS

qsea 1.14.0

Matthias Lienhard

qsmooth 1.4.0

Stephanie C. Hicks

QSutils 1.6.0

Mercedes Guerrero-Murillo

Qtlizer 1.2.0

Matthias Munz

~~QUALIFIER~~ 1.32.0

Mike Jiang

ERROR

skipped

quantro 1.22.0

Stephanie Hicks

quantsmooth 1.54.0

Jan Oosting

QuartPAC 1.20.0

Gregory Ryslik

QuasR 1.28.0

Michael Stadler

QuaternaryProd 1.22.0

Carl Tony Fakhry

QUBIC 1.16.0

Yu Zhang

qusage 2.22.0

Christopher Bolen

qvalue 2.20.0

John D. Storey , Andrew J. Bass

R3CPET 1.20.0

Mohamed Nadhir Djekidel

ERROR

skipped

r3Cseq 1.34.0

Supat Thongjuea or

R453Plus1Toolbox 1.38.0

Hans-Ulrich Klein

R4RNA 1.16.0

Daniel Lai

RaggedExperiment 1.12.0

Martin Morgan

rain 1.22.0

Paul F. Thaben

ERROR

skipped

rama 1.62.0

Raphael Gottardo

ramwas 1.12.0

Andrey A Shabalin

RandomWalkRestartMH 1.8.0

Alberto Valdeolivas Urbelz

randPack 1.34.0

Robert Gentleman

randRotation 1.0.0

Peter Hettegger

RankProd 3.14.0

Francesco Del Carratore

RareVariantVis 2.16.0

Tomasz Stokowy

Rariant 1.24.0

Julian Gehring

ERROR

skipped

RbcBook1 1.56.0

Vince Carey

RBGL 1.64.0

Bioconductor Package Maintainer

RBioinf 1.48.0

Robert Gentleman

rBiopaxParser 2.28.0

Frank Kramer

RBM 1.20.0

Dongmei Li

Rbowtie 1.28.1

Michael Stadler

Rbowtie2 1.10.1

Zheng Wei

rbsurv 2.46.0

Soo-heang Eo

Rcade 1.30.0

Jonathan Cairns

WARNINGS

RCAS 1.14.0

Bora Uyar

RCASPAR 1.34.0

Douaa Mugahid , Lars Kaderali

rcellminer 2.10.2

Augustin Luna , Vinodh Rajapakse

rCGH 1.18.0

Frederic Commo

RchyOptimyx 2.28.0

Adrin Jalali , Nima Aghaeepour

WARNINGS

RcisTarget 1.8.0

Sara Aibar

RCM 1.4.0

Joris Meys

WARNINGS

Rcpi 1.24.0

Nan Xiao

Rcwl 1.4.8

Qiang Hu

RcwlPipelines 1.4.5

Qiang Hu

RCy3 2.8.1

Alex Pico

RCyjs 2.10.0

Paul Shannon

WARNINGS

RDAVIDWebService 1.26.0

Cristobal Fresno

WARNINGS

rDGIdb 1.14.0

Thomas Thurnherr

ERROR

skipped

Rdisop 1.48.0

Steffen Neumann

RDRToolbox 1.38.0

Christoph Bartenhagen

WARNINGS

ReactomeGSA 1.2.4

Johannes Griss

ReactomePA 1.32.0

Guangchuang Yu

~~readat~~ 1.14.0

Richard Cotton

ERROR

skipped

ReadqPCR 1.34.0

James Perkins

reb 1.66.0

Karl J. Dykema

ERROR

REBET 1.6.0

Bill Wheeler

receptLoss 1.0.0

Daniel Pique

reconsi 1.0.0

Joris Meys

recount 1.14.0

Leonardo Collado-Torres

recoup 1.16.0

Panagiotis Moulos

RedeR 1.36.0

Mauro Castro

REDseq 1.34.0

Lihua Julie Zhu

~~RefNet~~ 1.24.0

Paul Shannon

WARNINGS

RefPlus 1.58.0

Kai-Ming Chang

regioneR 1.20.1

Bernat Gel

regionReport 1.22.0

Leonardo Collado-Torres

regsplice 1.14.0

Lukas M. Weber

regutools 1.0.1

Joselyn Chavez

REMP 1.12.0

Yinan Zheng

Repitools 1.34.0

Mark Robinson

ReportingTools 2.28.0

Jason A. Hackney , Gabriel Becker

RepViz 1.4.0

Thomas Faux, Asta Laiho

WARNINGS

ReQON 1.34.0

Christopher Cabanski

restfulSE 1.10.0

Shweta Gopaulakrishnan

WARNINGS

rexposome 1.10.0

Carles Hernandez-Ferrer

rfaRm 1.0.0

Lara Selles Vidal

rfPred 1.26.0

Hugo Varet

rGADEM 2.36.0

Arnaud Droit

RGalaxy 1.32.0

Bioconductor Package Maintainer

Rgin 1.8.0

Hector Climente-Gonzalez

WARNINGS

RGMQL 1.8.0

Simone Pallotta

ERROR

skipped

RGraph2js 1.16.0

Stephane Cano

Rgraphviz 2.32.0

Kasper Daniel Hansen

WARNINGS

rGREAT 1.20.0

Zuguang Gu

RGSEA 1.22.0

Chengcheng Ma

rgsepd 1.20.2

Karl Stamm

rhdf5 2.32.4

Mike Smith

rhdf5client 1.10.0

Vincent Carey

rhdf5filters 1.0.1

Mike Smith

Rhdf5lib 1.10.1

Mike Smith

Rhisat2 1.4.0

Charlotte Soneson

Rhtslib 1.20.0

Bioconductor Package Maintainer

RiboProfiling 1.18.0

A. Popa

WARNINGS

ribor 1.0.0

Michael Geng

riboSeqR 1.22.0

Thomas J. Hardcastle

ribosomeProfilingQC 1.0.6

Jianhong Ou

RImmPort 1.16.0

Zicheng Hu , Ravi Shankar

Ringo 1.52.0

J. Toedling

~~RIPSeeker~~ 1.28.0

Yue Li

ERROR

Risa 1.30.0

Alejandra Gonzalez-Beltran

RITAN 1.12.0

Michael Zimmermann

RIVER 1.12.0

Yungil Kim

RJMCMCNucleosomes 1.12.0

Astrid Deschênes

RLMM 1.50.0

Nusrat Rabbee

Rmagpie 1.44.0

Camille Maumet

RMassBank 2.16.0

RMassBank at Eawag

WARNINGS

rmelting 1.4.0

J. Aravind

RmiR 1.44.0

Francesco Favero

Rmmquant 1.6.0

Zytnicki Matthias

RNAAgeCalc 1.0.2

Xu Ren

RNAdecay 1.8.0

Reed Sorenson

RNAinteract 1.36.0

Bernd Fischer

RNAither 2.36.0

Lars Kaderali

RNAmodR 1.2.3

Felix G.M. Ernst

RNAmodR.AlkAnilineSeq 1.2.0

Felix G.M. Ernst

RNAmodR.ML 1.2.1

Felix G.M. Ernst

RNAmodR.RiboMethSeq 1.2.0

Felix G.M. Ernst

RNAprobR 1.20.0

Nikos Sidiropoulos

WARNINGS

RNAsense 1.2.0

Marcus Rosenblatt

WARNINGS

rnaseqcomp 1.18.0

Mingxiang Teng

rnaSeqMap 2.46.0

Michal Okoniewski

RNASeqPower 1.28.0

Terry M Therneau

RNASeqR 1.6.0

Kuan-Hao Chao

RnBeads 2.6.0

Fabian Mueller

Rnits 1.22.0

Dipen P. Sangurdekar

WARNINGS

roar 1.24.0

Elena Grassi

ROC 1.64.0

Vince Carey

ROCpAI 1.0.0

Juan-Pedro Garcia

Roleswitch 1.26.0

Yue Li

ERROR

rols 2.16.4

Laurent Gatto

ROntoTools 2.16.0

Calin Voichita

ropls 1.20.0

Etienne A. Thevenot

ROSeq 1.0.0

Krishan Gupta

ROTS 1.16.0

Tomi Suomi

RPA 1.44.0

Leo Lahti

RProtoBufLib 2.0.0

Mike Jiang , Jake Wagner

RpsiXML 2.30.0

Jitao David Zhang

rpx 1.24.0

Laurent Gatto

Rqc 1.22.0

Welliton Souza

rqt 1.14.0

Ilya Y. Zhbannikov

rqubic 1.34.0

Jitao David Zhang

rRDP 1.22.0

Michael Hahsler

RRHO 1.28.0

Jonathan Rosenblatt

rrvgo 1.0.2

Sergi Sayols

Rsamtools 2.4.0

Bioconductor Package Maintainer

WARNINGS

rsbml

...NOT SUPPORTED...

rScudo 1.4.0

Matteo Ciciani

RSeqAn 1.8.0

August Guang

Rsubread 2.2.6

Wei Shi , Yang Liao and Gordon K Smyth

RSVSim 1.28.0

Christoph Bartenhagen

rSWeeP 1.0.0

Danrley R. Fernandes

rTANDEM 1.28.0

Frederic Fournier

ERROR

RTCA 1.40.0

Jitao David Zhang

WARNINGS

RTCGA 1.18.0

Marcin Kosinski

RTCGAToolbox 2.18.0

Marcel Ramos

RTN 2.12.1

Mauro Castro

RTNduals 1.12.2

Mauro Castro , Clarice Groeneveld

RTNsurvival 1.12.2

Clarice Groeneveld , Mauro A. A. Castro

RTopper 1.34.0

Luigi Marchionni

rtracklayer 1.48.0

Michael Lawrence

WARNINGS

Rtreemix 1.50.0

Jasmina Bogojeska

rTRM 1.26.0

Diego Diez

rTRMui 1.26.0

Diego Diez

runibic 1.10.0

Patryk Orzechowski

ERROR

skipped

RUVcorr 1.20.0

Saskia Freytag

RUVnormalize 1.22.0

Laurent Jacob

RUVSeq 1.22.0

Davide Risso

RVS 1.10.0

Thomas Sherman

rWikiPathways 1.8.5

Egon Willighagen

S4Vectors 0.26.1

Bioconductor Package Maintainer

WARNINGS

safe 3.28.1

Ludwig Geistlinger

sagenhaft 1.58.0

Tim Beissbarth

WARNINGS

SAGx 1.62.0

Per Broberg,

SAIGEgds 1.2.3

Xiuwen Zheng

samExploreR 1.12.0

shailesh tripathi

sampleClassifier 1.12.0

Khadija El Amrani

ERROR

skipped

SamSPECTRAL 1.42.0

Habil

WARNINGS

sangerseqR 1.24.0

Jonathon Hill

~~SANTA~~ 2.26.0

Alex J. Cornish

ERROR

skipped

sapFinder 1.26.0

Shaohang Xu , Bo Wen

sarks 1.0.0

Dennis Wylie

savR 1.26.0

R. Brent Calder

SBGNview 1.2.0

Xiaoxi Dong

SBMLR 1.84.0

Tomas Radivoyevitch

ERROR

SC3 1.16.0

Vladimir Kiselev

Scale4C 1.10.0

Carolin Walter

scAlign

...NOT SUPPORTED...

SCAN.UPC 2.30.0

Stephen R. Piccolo

SCANVIS 1.2.0

Phaedra Agius

scater 1.16.2

Davis McCarthy

scBFA 1.2.0

Ruoxin Li

SCBN 1.6.0

Yan Zhou

scClassify 1.0.0

Yingxin Lin

scDblFinder 1.2.0

Pierre-Luc Germain

scDD 1.12.0

Keegan Korthauer

scde 2.16.0

Jean Fan

WARNINGS

scds 1.4.0

Dennis Kostka

scFeatureFilter 1.8.0

Guillaume Devailly

~~scfind~~ 1.10.0

Vladimir Kiselev

ERROR

skipped

scGPS 1.2.0

Quan Nguyen

schex 1.2.0

Saskia Freytag

scHOT 1.0.0

Shila Ghazanfar

ScISI 1.60.0

Tony Chiang

scMAGeCK 1.0.0

Xiaolong Cheng

scmap 1.10.0

Vladimir Kiselev

scMerge 1.4.0

Kevin Wang

scmeth 1.8.0

Divy Kangeyan

SCnorm 1.10.0

Rhonda Bacher

scone 1.12.0

Davide Risso

Sconify 1.8.0

Tyler J Burns

SCOPE 1.0.0

Rujin Wang

scoreInvHap 1.10.0

Carlos Ruiz

scPCA 1.2.0

Philippe Boileau

scPipe 1.10.0

Luyi Tian

scran 1.16.0

Aaron Lun

scRecover 1.4.1

Zhun Miao

scruff 1.6.0

Zhe Wang

scry 1.0.1

F. William Townes

scsR 1.24.0

Andrea Franceschini , Roger Meier , Christian von Mering

ERROR

scTensor 1.4.3

Koki Tsuyuzaki

scTGIF 1.2.2

Koki Tsuyuzaki

scTHI 1.0.0

Michele Ceccarelli

SDAMS 1.8.0

Yuntong Li

segmentSeq 2.22.0

Thomas J. Hardcastle

selectKSigs 1.0.0

Zhi Yang

SELEX 1.20.0

Harmen J. Bussemaker

SemDist 1.22.0

Ian Gonzalez

semisup 1.12.4

Armin Rauschenberger

SEPIRA 1.8.0

Yuting Chen

seq2pathway 1.20.0

Xinan Yang with contribution from Zhezhen Wang

WARNINGS

SeqArray 1.28.1

Xiuwen Zheng

seqbias 1.36.0

Daniel Jones

WARNINGS

seqCAT 1.10.0

Erik Fasterius

seqCNA 1.34.0

David Mosen-Ansorena

seqcombo 1.10.0

Guangchuang Yu

SeqGSEA 1.28.0

Xi Wang

WARNINGS

seqLogo 1.54.3

Robert Ivanek

seqPattern 1.20.0

Vanja Haberle

seqplots 1.26.0

Przemyslaw Stempor

seqsetvis 1.8.0

Joseph R Boyd

SeqSQC 1.10.0

Qian Liu

seqTools 1.22.0

Wolfgang Kaisers

WARNINGS

SeqVarTools 1.26.0

Stephanie M. Gogarten

sesame 1.6.0

Wanding Zhou

SEtools 1.2.0

Pierre-Luc Germain

sevenbridges 1.18.1

Nan Xiao

sevenC 1.8.0

Jonas Ibn-Salem

SGSeq 1.22.0

Leonard Goldstein

SharedObject 1.2.2

Jiefei Wang

shinyMethyl 1.24.0

Jean-Philippe Fortin

shinyTANDEM 1.26.0

Frederic Fournier

ShortRead 1.46.0

Bioconductor Package Maintainer

SIAMCAT 1.8.1

Konrad Zych

SICtools 1.18.0

Xiaobin Xing

WARNINGS

sigaR 1.36.0

Wessel N. van Wieringen

ERROR

SigCheck 2.20.0

Rory Stark

sigFeature 1.6.0

Pijush Das Developer

SigFuge 1.26.0

Patrick Kimes

siggenes 1.62.0

Holger Schwender

sights 1.14.0

Elika Garg

signatureSearch 1.2.5

Yuzhu Duan

signeR 1.14.0

Renan Valieris

signet 1.8.2

Alexandre Gouy

ERROR

skipped

sigPathway 1.56.0

Weil Lai

SigsPack 1.2.0

Franziska Schumann

sigsquared 1.20.0

UnJin Lee

SIM 1.58.0

Renee X. de Menezes

SIMAT 1.20.0

M. R. Nezami Ranjbar

SimBindProfiles 1.26.0

Bettina Fischer

SIMD 1.6.0

Jiadi Zhu

SimFFPE 1.0.0

Lanying Wei

similaRpeak 1.20.0

Astrid Deschenes

SIMLR 1.14.0

Luca De Sano

simpleaffy 2.64.0

Crispin Miller

WARNINGS

simulatorZ 1.22.0

Yuqing Zhang

ERROR

skipped

sincell 1.20.0

Miguel Julia , Antonio Rausell

SingleCellExperiment 1.10.1

Davide Risso

SingleCellSignalR 1.0.0

Jacques Colinge

singleCellTK 1.8.0

David Jenkins

SingleR 1.2.4

Aaron Lun

ERROR

skipped

singscore 1.8.0

Dharmesh D. Bhuva

SISPA 1.18.0

Bhakti Dwivedi

WARNINGS

sitePath 1.4.2

Chengyang Ji

sizepower 1.58.0

Weiliang Qiu

skewr 1.20.0

Ryan Putney

slalom 1.10.0

Davis McCarthy

SLGI 1.48.0

Nolwenn Le Meur

slingshot 1.6.1

Kelly Street

slinky 1.6.0

Eric J. Kort

SLqPCR 1.54.0

Matthias Kohl

SMAD 1.4.0

Qingzhou Zhang

SMAP 1.52.0

Robin Andersson

SMITE 1.16.0

Neil Ari Wijetunga

SNAGEE 1.28.0

David Venet

snapCGH 1.58.0

John Marioni

snapcount 1.0.0

Rone Charles

snm 1.36.0

John D. Storey

SNPediaR 1.14.0

David Montaner

SNPhood 1.18.0

Christian Arnold

SNPRelate 1.22.0

Xiuwen Zheng

snpStats 1.38.0

David Clayton

soGGi 1.20.0

Tom Carroll

sojourner 1.2.1

Sojourner Developer

SomaticSignatures 2.24.0

Julian Gehring

SpacePAC 1.26.0

Gregory Ryslik

Spaniel 1.2.0

Rachel Queen

sparseDOSSA 1.12.0

Boyu Ren, Emma Schwager

sparseMatrixStats 1.0.5

Constantin Ahlmann-Eltze

sparsenetgls 1.6.1

Irene SL Zeng

SparseSignatures 1.8.0

Luca De Sano

SpatialCPie 1.4.0

Joseph Bergenstraahle

specL 1.22.0

Christian Panse

SpeCond 1.42.0

Florence Cavalli

SpectralTAD 1.4.0

Kellen Cresswell

ERROR

skipped

SPEM 1.28.0

Xinyi YANG

SPIA 2.40.0

Adi Laurentiu Tarca

spicyR 1.0.1

Ellis Patrick

SpidermiR 1.18.2

Claudia Cava

WARNINGS

spikeLI 2.48.0

Enrico Carlon

spkTools 1.44.0

Matthew N McCall

splatter 1.12.0

Luke Zappia

~~splicegear~~ 1.60.0

Laurent Gautier

ERROR

skipped

SplicingGraphs 1.28.0

H. Pagès

WARNINGS

splineTimeR 1.16.0

Herbert Braselmann , Martin Selmansberger

SPLINTER 1.14.0

Diana Low

splots 1.54.0

Wolfgang Huber

SPONGE 1.10.0

Markus List

spotSegmentation 1.62.0

Chris Fraley

ERROR

spqn 1.0.0

Yi Wang

SQLDataFrame 1.2.0

Qian Liu

WARNINGS

SQUADD 1.38.0

Martial Sankar

sRACIPE 1.4.0

Vivek Kohar

SRAdb 1.50.0

Jack Zhu

~~sRAP~~ 1.28.0

Charles Warden

ERROR

skipped

SRGnet 1.14.0

Isar Nassiri

srnadiff 1.8.2

Zytnicki Matthias

sscore 1.60.0

Richard Kennedy

sscu 2.18.0

Yu Sun

WARNINGS

sSeq 1.26.0

Danni Yu

ssize 1.62.0

Gregory R. Warnes

SSPA 2.28.0

Maarten van Iterson

WARNINGS

ssPATHS 1.2.0

Natalie R. Davidson

ssrch 1.4.0

VJ Carey

ssviz 1.22.0

Diana Low

stageR 1.10.0

Koen Van den Berge

WARNINGS

STAN 2.16.0

Rafael Campos-Martin

WARNINGS

staRank 1.30.0

Juliane Siebourg

StarBioTrek 1.14.0

Claudia Cava

WARNINGS

Starr 1.44.0

Benedikt Zacher

ERROR

STATegRa 1.24.0

David Gomez-Cabrero , Núria Planell

statTarget 1.18.0

Hemi Luan

stepNorm 1.60.0

Yuanyuan Xiao

strandCheckR 1.6.0

Thu-Hien To

Streamer 1.34.0

Martin Morgan

STRINGdb 2.0.2

Damian Szklarczyk

STROMA4 1.12.0

Sadiq Saleh

struct 1.0.0

Gavin Rhys Lloyd

Structstrings 1.4.1

Felix G.M. Ernst

structToolbox 1.0.1

Gavin Rhys Lloyd

StructuralVariantAnnotation 1.4.0

Daniel Cameron

SubCellBarCode 1.4.0

Taner Arslan

subSeq 1.18.0

Andrew J. Bass , John D. Storey

SummarizedBenchmark 2.6.0

Patrick Kimes

SummarizedExperiment 1.18.2

Bioconductor Package Maintainer

supraHex 1.26.0

Hai Fang

survcomp 1.38.0

Benjamin Haibe-Kains , Markus Schroeder , Catharina Olsen

WARNINGS

survtype 1.4.0

Dongmin Jung

Sushi 1.26.0

Douglas H Phanstiel

WARNINGS

sva 3.36.0

Jeffrey T. Leek , John D. Storey

SVAPLSseq 1.14.0

Sutirtha Chakraborty

ERROR

SWATH2stats 1.18.0

Peter Blattmann

SwathXtend 2.10.0

Jemma Wu

WARNINGS

swfdr 1.14.0

Simina M. Boca , Jeffrey T. Leek

SwimR 1.26.0

Randy Blakely

switchBox 1.24.0

Bahman Afsari , Luigi Marchionni

WARNINGS

switchde 1.14.0

Kieran Campbell

synapter 2.12.0

Laurent Gatto

synergyfinder 2.2.4

Shuyu Zheng

SynExtend 1.0.0

Nicholas Cooley

synlet 1.18.0

Chunxuan Shao

SynMut 1.4.0

Haogao Gu

systemPipeR 1.22.0

Thomas Girke

TAPseq 1.0.0

Andreas Gschwind

WARNINGS

target 1.2.0

Mahmoud Ahmed

TargetScore 1.26.0

Yue Li

TargetSearch 1.44.0

Alvaro Cuadros-Inostroza

TarSeqQC 1.18.0

Gabriela Merino

TBSignatureProfiler 1.0.0

David Jenkins

TCC 1.28.0

Jianqiang Sun

WARNINGS

TCGAbiolinks 2.16.4

Tiago Chedraoui Silva

WARNINGS

TCGAbiolinksGUI 1.14.0

Tiago C. Silva

TCGAutils 1.8.1

Marcel Ramos

TCseq 1.12.1

Mengjun Wu

TDARACNE 1.38.0

Zoppoli Pietro

tenXplore 1.10.0

VJ Carey

TEQC 4.10.0

Manuela Hummel

ERROR

skipped

ternarynet 1.32.0

Matthew N. McCall

TFARM 1.10.0

Liuba Nausicaa Martino

TFBSTools 1.26.0

Ge Tan

TFEA.ChIP 1.8.0

Laura Puente Santamaría

TFHAZ 1.10.0

Alberto Marchesi

TFutils 1.8.0

Shweta Gopaulakrishnan

WARNINGS

tidybulk 1.0.2

Stefano Mangiola

WARNINGS

tigre 1.42.0

Antti Honkela

tilingArray 1.66.0

Zhenyu Xu

timecourse 1.60.0

Yu Chuan Tai

timeOmics 1.0.1

Antoine Bodein

ERROR

skipped

timescape 1.12.0

Maia Smith

WARNINGS

TimeSeriesExperiment 1.6.0

Lan Huong Nguyen

WARNINGS

TIN 1.20.0

Bjarne Johannessen

TissueEnrich 1.8.0

Ashish Jain

TitanCNA 1.26.0

Gavin Ha

WARNINGS

tkWidgets 1.66.0

J. Zhang

TMixClust 1.10.0

Monica Golumbeanu

TNBC.CMS 1.4.0

Doyeong Yu

TnT 1.10.0

Jialin Ma

TOAST 1.2.0

Ziyi Li

tofsims 1.16.0

Lorenz Gerber

ERROR

skipped

ToPASeq 1.22.0

Ivana Ihnatova

WARNINGS

topconfects 1.4.0

Paul Harrison

topdownr 1.10.0

Sebastian Gibb

topGO 2.40.0

Adrian Alexa

TPP 3.16.5

Dorothee Childs

TPP2D 1.4.1

Nils Kurzawa

tracktables 1.22.0

Tom Carroll

WARNINGS

trackViewer 1.24.2

Jianhong Ou

tradeSeq 1.2.01

Hector Roux de Bezieux

transcriptogramer 1.10.0

Diego Morais

transcriptR 1.16.0

Armen R. Karapetyan

transite 1.6.2

Konstantin Krismer

tRanslatome 1.26.0

Toma Tebaldi , Erik Dassi

WARNINGS

TransView 1.32.0

Julius Muller

traseR 1.18.0

li chen

TreeAndLeaf 1.0.0

Milena Cardoso

treeio 1.12.0

Guangchuang Yu

TreeSummarizedExperiment 1.4.8

Ruizhu Huang

trena 1.10.2

Paul Shannon

WARNINGS

Trendy 1.10.0

Rhonda Bacher

~~triform~~ 1.30.0

Thomas Carroll

ERROR

skipped

trigger 1.34.0

John D. Storey

trio 3.26.0

Holger Schwender

triplex 1.28.0

Jiri Hon

tRNA 1.6.1

Felix GM Ernst

tRNAdbImport 1.6.1

Felix G.M. Ernst

tRNAscanImport 1.8.1

Felix G.M. Ernst

TRONCO 2.20.1

Luca De Sano

TSCAN 1.26.0

Zhicheng Ji

tscR 1.0.1

Pérez-Sanz, Fernando

WARNINGS

tspair 1.46.0

Jeffrey T. Leek

TSRchitect 1.14.0

R. Taylor Raborn

WARNINGS

TTMap 1.10.0

Rachel Jeitziner

WARNINGS

TurboNorm 1.36.0

Maarten van Iterson

TVTB 1.14.0

Kevin Rue-Albrecht

tweeDEseq 1.34.0

Juan R Gonzalez

twilight 1.64.0

Stefanie Scheid

WARNINGS

twoddpcr 1.12.0

Anthony Chiu

tximeta 1.6.3

Michael Love

tximport 1.16.1

Michael Love

TxRegInfra 1.8.0

VJ Carey

TypeInfo 1.54.0

Duncan Temple Lang

Ularcirc 1.6.0

David Humphreys

UNDO 1.30.0

Niya Wang

unifiedWMWqPCR 1.24.0

Joris Meys

WARNINGS

UniProt.ws 2.28.0

Bioconductor Package Maintainer

Uniquorn 2.8.0

'Raik Otto'

universalmotif 1.6.4

Benjamin Jean-Marie Tremblay

uSORT 1.14.0

Hao Chen

WARNINGS

VanillaICE 1.50.0

Robert Scharpf

variancePartition 1.18.3

Gabriel E. Hoffman

VariantAnnotation 1.34.0

Bioconductor Package Maintainer

VariantExperiment 1.2.0

Qian Liu

VariantFiltering 1.24.0

Robert Castelo

VariantTools 1.30.0

Michael Lawrence

WARNINGS

vasp 1.0.0

Huihui Yu

vbmp 1.56.0

Nicola Lama

VCFArray 1.4.0

Qian Liu

~~Vega~~ 1.36.0

Sandro Morganella

ERROR

VegaMC 3.26.0

Sandro Morganella

WARNINGS

VennDetail 1.4.0

Kai Guo

vidger 1.8.0

Brandon Monier

viper 1.22.0

Mariano J Alvarez

WARNINGS

ViSEAGO 1.2.0

Aurelien Brionne

ERROR

vsn 3.56.0

Wolfgang Huber

vtpnet 0.28.0

VJ Carey

vulcan 1.10.0

Federico M. Giorgi

waddR 1.2.0

Julian Flesch

wateRmelon 1.32.0

Leo

wavClusteR 2.22.0

Federico Comoglio

ERROR

skipped

~~waveTiling~~ 1.30.0

Kristof De Beuf

ERROR

skipped

weaver 1.54.0

Seth Falcon

WARNINGS

webbioc 1.60.0

Colin A. Smith

WARNINGS

weitrix 1.0.0

Paul Harrison

ERROR

skipped

widgetTools 1.66.0

Jianhua Zhang

wiggleplotr 1.12.1

Kaur Alasoo

Wrench 1.6.0

Hector Corrada Bravo

XBSeq 1.20.0

Yuanhang Liu

XCIR 1.2.0

Renan Sauteraud

xcms 3.10.2

Steffen Neumann

TIMEOUT

skipped

XDE 2.34.0

Robert Scharpf

Xeva 1.4.0

Benjamin Haibe-Kains

XINA 1.6.0

Lang Ho Lee

xmapbridge 1.46.0

Chris Wirth

xps

...NOT SUPPORTED...

XVector 0.28.0

Hervé Pagès

WARNINGS

yamss 1.14.0

Leslie Myint

YAPSA 1.14.0

Daniel Huebschmann

yaqcaffy 1.48.0

Laurent Gatto

yarn 1.14.0

Joseph N Paulson

zFPKM 1.10.0

Ron Ammar

zinbwave 1.10.1

Davide Risso

zlibbioc 1.34.0

Bioconductor Package Maintainer