Britta Velten
| Snapshot Date: 2025-10-05 13:45 -0400 (Sun, 05 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-06 12:03 -0400 (Mon, 06 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4853 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4640 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4585 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4576 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-10-06 00:31:21 -0400 (Mon, 06 Oct 2025) |
| EndedAt: 2025-10-06 00:32:53 -0400 (Mon, 06 Oct 2025) |
| EllapsedTime: 92.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-819.502
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.343
ELB improved by 260.159
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.166
ELB improved by 58.1775
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.588
ELB improved by 37.5775
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.179
ELB improved by 17.4091
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.752
ELB improved by 7.4269
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.105
ELB improved by 4.64738
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.134
ELB improved by 3.97063
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.378
ELB improved by 3.75616
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.742
ELB improved by 3.6354
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.262
ELB improved by 3.48084
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.018
ELB improved by 3.24344
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.111
ELB improved by 2.90751
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.626
ELB improved by 2.48509
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.59
ELB improved by 2.03529
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.961
ELB improved by 1.62902
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.668
ELB improved by 1.29373
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.643
ELB improved by 1.0248
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.829
ELB improved by 0.814011
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.175
ELB improved by 0.653684
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.641
ELB improved by 0.534168
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.196
ELB improved by 0.445182
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.818
ELB improved by 0.377529
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.494
ELB improved by 0.323877
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.215
ELB improved by 0.279256
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.974
ELB improved by 0.241052
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.766
ELB improved by 0.208282
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.585
ELB improved by 0.180699
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.427
ELB improved by 0.15816
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.287
ELB improved by 0.140299
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.16
ELB improved by 0.126467
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.044
ELB improved by 0.115868
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.936
ELB improved by 0.107739
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.835
ELB improved by 0.101455
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.738
ELB improved by 0.0965484
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.646
ELB improved by 0.0926886
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.556
ELB improved by 0.0896433
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.469
ELB improved by 0.0872499
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.383
ELB improved by 0.0853921
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.3
ELB improved by 0.083986
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.217
ELB improved by 0.0829706
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.134
ELB improved by 0.0823023
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.052
ELB improved by 0.0819514
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.97
ELB improved by 0.0818991
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.888
ELB improved by 0.082136
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.806
ELB improved by 0.0826603
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.722
ELB improved by 0.0834756
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.638
ELB improved by 0.0845898
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.552
ELB improved by 0.0860129
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.464
ELB improved by 0.0877549
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.374
ELB improved by 0.0898235
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.282
ELB improved by 0.0922217
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.187
ELB improved by 0.0949448
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.089
ELB improved by 0.0979777
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.987
ELB improved by 0.101291
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.883
ELB improved by 0.104838
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.774
ELB improved by 0.108553
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.662
ELB improved by 0.112344
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.546
ELB improved by 0.1161
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.426
ELB improved by 0.119684
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.303
ELB improved by 0.122941
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.177
ELB improved by 0.125707
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.05
ELB improved by 0.127818
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.92
ELB improved by 0.129128
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.791
ELB improved by 0.129523
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.662
ELB improved by 0.128942
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.535
ELB improved by 0.127383
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.41
ELB improved by 0.124913
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.288
ELB improved by 0.12166
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.17
ELB improved by 0.117806
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.057
ELB improved by 0.113566
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.947
ELB improved by 0.109162
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.843
ELB improved by 0.104805
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.742
ELB improved by 0.10067
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.645
ELB improved by 0.0968829
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.552
ELB improved by 0.093503
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.461
ELB improved by 0.0905236
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.373
ELB improved by 0.0878762
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.288
ELB improved by 0.0854511
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.205
ELB improved by 0.0831278
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.124
ELB improved by 0.0808096
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.045
ELB improved by 0.0784492
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.969
ELB improved by 0.07606
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.896
ELB improved by 0.0737177
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.824
ELB improved by 0.0715681
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.754
ELB improved by 0.0698603
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.685
ELB improved by 0.069016
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.615
ELB improved by 0.0697416
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.542
ELB improved by 0.0731778
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.461
ELB improved by 0.0810332
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.366
ELB improved by 0.0954705
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.248
ELB improved by 0.118086
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.101
ELB improved by 0.146952
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.928
ELB improved by 0.172321
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.75
ELB improved by 0.177896
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.595
ELB improved by 0.155898
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.476
ELB improved by 0.119022
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.39
ELB improved by 0.0853651
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.329
ELB improved by 0.0614726
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.283
ELB improved by 0.0453807
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.249
ELB improved by 0.0340586
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.223
ELB improved by 0.0257411
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.204
ELB improved by 0.0195894
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.189
ELB improved by 0.0151077
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.177
ELB improved by 0.0118874
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.167
ELB improved by 0.00957365
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.941
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.622
ELB improved by 296.319
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.855
ELB improved by 59.767
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.695
ELB improved by 40.1595
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.839
ELB improved by 16.8565
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.088
ELB improved by 6.75124
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.645
ELB improved by 4.44246
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.764
ELB improved by 3.88141
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.846
ELB improved by 3.91772
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.575
ELB improved by 4.27084
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.736
ELB improved by 4.83947
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.201
ELB improved by 5.53451
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.062
ELB improved by 6.13933
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.838
ELB improved by 6.22351
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.396
ELB improved by 5.44296
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.317
ELB improved by 4.07821
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.512
ELB improved by 2.80572
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.62
ELB improved by 1.8916
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.308
ELB improved by 1.31156
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.312
ELB improved by 0.996396
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.445
ELB improved by 0.866961
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.602
ELB improved by 0.843176
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.799
ELB improved by 0.802865
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.133
ELB improved by 0.666418
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.617
ELB improved by 0.515405
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.215
ELB improved by 0.402123
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.896
ELB improved by 0.319291
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.636
ELB improved by 0.259481
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.419
ELB improved by 0.216854
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.234
ELB improved by 0.185713
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.072
ELB improved by 0.162059
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.928
ELB improved by 0.143535
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.799
ELB improved by 0.128748
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.683
ELB improved by 0.11681
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.575
ELB improved by 0.1071
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.476
ELB improved by 0.099158
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.384
ELB improved by 0.0926304
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.296
ELB improved by 0.0872367
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.214
ELB improved by 0.0827524
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.135
ELB improved by 0.0789966
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.059
ELB improved by 0.0758233
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.986
ELB improved by 0.0731155
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.915
ELB improved by 0.0707801
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.846
ELB improved by 0.0687438
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.779
ELB improved by 0.0669503
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.714
ELB improved by 0.0653571
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.65
ELB improved by 0.0639332
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.587
ELB improved by 0.0626567
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.526
ELB improved by 0.061513
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.465
ELB improved by 0.0604929
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.406
ELB improved by 0.0595907
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.347
ELB improved by 0.0588028
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.289
ELB improved by 0.0581267
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.231
ELB improved by 0.057559
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.174
ELB improved by 0.057095
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.117
ELB improved by 0.0567276
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.061
ELB improved by 0.056447
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.005
ELB improved by 0.0562404
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.949
ELB improved by 0.0560919
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.893
ELB improved by 0.0559834
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.837
ELB improved by 0.0558953
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.781
ELB improved by 0.055807
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.725
ELB improved by 0.0556986
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.67
ELB improved by 0.0555514
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.614
ELB improved by 0.0553488
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.559
ELB improved by 0.0550767
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.505
ELB improved by 0.0547239
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.45
ELB improved by 0.0542824
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.397
ELB improved by 0.0537473
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.343
ELB improved by 0.0531163
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.291
ELB improved by 0.05239
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.239
ELB improved by 0.0515707
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.189
ELB improved by 0.0506622
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.139
ELB improved by 0.0496686
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.091
ELB improved by 0.0485935
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.043
ELB improved by 0.0474393
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.997
ELB improved by 0.0462063
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.952
ELB improved by 0.0448928
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.909
ELB improved by 0.0434954
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.866
ELB improved by 0.0420098
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.826
ELB improved by 0.0404325
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.787
ELB improved by 0.0387624
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.75
ELB improved by 0.0370021
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.715
ELB improved by 0.0351594
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.682
ELB improved by 0.0332469
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.651
ELB improved by 0.0312825
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.621
ELB improved by 0.0292876
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.594
ELB improved by 0.0272856
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.569
ELB improved by 0.0253008
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.545
ELB improved by 0.0233563
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.524
ELB improved by 0.0214728
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.504
ELB improved by 0.0196683
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.486
ELB improved by 0.0179568
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.47
ELB improved by 0.0163489
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.455
ELB improved by 0.0148513
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.442
ELB improved by 0.0134676
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.429
ELB improved by 0.0121983
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.418
ELB improved by 0.0110417
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.408
ELB improved by 0.00999399
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-862.062
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.021
ELB improved by 297.041
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.497
ELB improved by 53.5237
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.083
ELB improved by 33.4138
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.802
ELB improved by 13.2815
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.918
ELB improved by 4.88355
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.436
ELB improved by 2.4827
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.714
ELB improved by 1.72201
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.299
ELB improved by 1.41465
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.038
ELB improved by 1.2606
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.876
ELB improved by 1.1626
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.787
ELB improved by 1.08871
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.76
ELB improved by 1.02722
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.788
ELB improved by 0.972027
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.869
ELB improved by 0.918975
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.003
ELB improved by 0.865754
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.19
ELB improved by 0.812945
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.426
ELB improved by 0.764632
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.698
ELB improved by 0.727514
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.99
ELB improved by 0.70839
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.279
ELB improved by 0.710927
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.545
ELB improved by 0.733655
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.773
ELB improved by 0.77167
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.953
ELB improved by 0.82013
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.08
ELB improved by 0.873217
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.155
ELB improved by 0.924703
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.179
ELB improved by 0.976827
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.138
ELB improved by 1.0402
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.014
ELB improved by 1.1244
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.779
ELB improved by 1.23449
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.411
ELB improved by 1.36895
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.9
ELB improved by 1.51029
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.285
ELB improved by 1.61557
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.654
ELB improved by 1.63114
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.113
ELB improved by 1.54091
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.719
ELB improved by 1.39353
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.477
ELB improved by 1.24231
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.417
ELB improved by 1.05936
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.583
ELB improved by 0.833947
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.933
ELB improved by 0.65074
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.394
ELB improved by 0.539202
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.939
ELB improved by 0.454964
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.579
ELB improved by 0.359344
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.318
ELB improved by 0.261572
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.132
ELB improved by 0.185951
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.994
ELB improved by 0.137576
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.885
ELB improved by 0.109214
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.792
ELB improved by 0.0932437
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.707
ELB improved by 0.0849418
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.625
ELB improved by 0.0819716
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.541
ELB improved by 0.0832863
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.454
ELB improved by 0.087927
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.36
ELB improved by 0.0934902
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.265
ELB improved by 0.0952138
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.176
ELB improved by 0.0886518
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.101
ELB improved by 0.0748296
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.042
ELB improved by 0.0593821
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.996
ELB improved by 0.0464548
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.959
ELB improved by 0.0368184
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.929
ELB improved by 0.0298012
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.904
ELB improved by 0.0246662
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.883
ELB improved by 0.020878
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.865
ELB improved by 0.0180499
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.849
ELB improved by 0.0158962
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.835
ELB improved by 0.0142112
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.822
ELB improved by 0.0128529
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.811
ELB improved by 0.0117265
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.8
ELB improved by 0.01077
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.79
ELB improved by 0.00994276
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.757
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.657
ELB improved by 300.1
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.065
ELB improved by 62.5915
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.137
ELB improved by 44.9287
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.555
ELB improved by 24.582
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.585
ELB improved by 10.9692
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.143
ELB improved by 5.44246
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.014
ELB improved by 3.12907
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.991
ELB improved by 2.0225
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.514
ELB improved by 1.47763
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.294
ELB improved by 1.21934
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.186
ELB improved by 1.10811
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.11
ELB improved by 1.07668
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.015
ELB improved by 1.0949
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.865
ELB improved by 1.14928
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.635
ELB improved by 1.23094
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.308
ELB improved by 1.32702
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.893
ELB improved by 1.4145
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.433
ELB improved by 1.46013
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413
ELB improved by 1.43279
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.675
ELB improved by 1.32489
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.513
ELB improved by 1.16271
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.522
ELB improved by 0.990738
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.676
ELB improved by 0.846043
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.929
ELB improved by 0.746791
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.232
ELB improved by 0.697171
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.534
ELB improved by 0.697494
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.787
ELB improved by 0.747222
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.956
ELB improved by 0.83125
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.046
ELB improved by 0.909923
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.087
ELB improved by 0.959347
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.096
ELB improved by 0.990772
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.084
ELB improved by 1.01204
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.066
ELB improved by 1.01802
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.064
ELB improved by 1.00177
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.102
ELB improved by 0.962028
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.195
ELB improved by 0.9065
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.343
ELB improved by 0.852404
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.516
ELB improved by 0.827168
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.65
ELB improved by 0.865571
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.692
ELB improved by 0.95783
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.713
ELB improved by 0.979188
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.785
ELB improved by 0.928624
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.854
ELB improved by 0.930593
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.959
ELB improved by 0.894842
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.252
ELB improved by 0.706849
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.749
ELB improved by 0.503037
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.383
ELB improved by 0.366499
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.097
ELB improved by 0.285896
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.857
ELB improved by 0.239953
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.647
ELB improved by 0.210362
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.463
ELB improved by 0.183449
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.309
ELB improved by 0.153721
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.186
ELB improved by 0.123586
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.088
ELB improved by 0.0974108
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.011
ELB improved by 0.0770413
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.949
ELB improved by 0.0619434
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.899
ELB improved by 0.0508139
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.856
ELB improved by 0.042473
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.82
ELB improved by 0.0360679
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.789
ELB improved by 0.0310261
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.762
ELB improved by 0.0269694
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.738
ELB improved by 0.0236456
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.718
ELB improved by 0.0208831
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.699
ELB improved by 0.0185613
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.682
ELB improved by 0.0165933
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.667
ELB improved by 0.0149139
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.654
ELB improved by 0.0134734
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.642
ELB improved by 0.0122325
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.631
ELB improved by 0.0111598
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.62
ELB improved by 0.0102295
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.611
ELB improved by 0.00942034
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.161 0.172 2.322
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.005 | 0.057 | |
| getPIPs | 0.051 | 0.000 | 0.052 | |
| graper | 0.078 | 0.005 | 0.084 | |
| makeExampleData | 0.009 | 0.002 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.009 | 0.003 | 0.013 | |
| plotELBO | 0.343 | 0.018 | 0.361 | |
| plotGroupPenalties | 1.144 | 0.052 | 1.195 | |
| plotPosterior | 0.735 | 0.011 | 0.746 | |
| predict.graper | 2.072 | 0.023 | 2.096 | |
| print.graper | 0.045 | 0.007 | 0.052 | |