Multiple platform build/check report for BioC 3.23 - CHECK results for graper on lconway

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"	4866
lconway	macOS 12.7.6 Monterey	x86_64	R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences"	4614
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"	4571
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on lconway

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.27.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz

StartedAt: 2025-11-28 01:59:38 -0500 (Fri, 28 Nov 2025)

EndedAt: 2025-11-28 02:03:00 -0500 (Fri, 28 Nov 2025)

EllapsedTime: 202.2 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-10-21 r88958)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-874.635
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.905
ELB improved by 301.73

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.721
ELB improved by 60.1832

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.512
ELB improved by 38.2092

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.045
ELB improved by 15.4672

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.174
ELB improved by 5.87105

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.492
ELB improved by 3.68228

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.355
ELB improved by 3.13673

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.383
ELB improved by 2.97189

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.488
ELB improved by 2.89515

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.694
ELB improved by 2.79364

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.079
ELB improved by 2.61514

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.737
ELB improved by 2.34211

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.742
ELB improved by 1.99504

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.115
ELB improved by 1.62706

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.819
ELB improved by 1.2962

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.779
ELB improved by 1.03967

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.911
ELB improved by 0.867685

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.143
ELB improved by 0.768157

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.43
ELB improved by 0.713475

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.759
ELB improved by 0.67052

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.143
ELB improved by 0.615981

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.596
ELB improved by 0.54696

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.122
ELB improved by 0.474034

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.716
ELB improved by 0.405819

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.372
ELB improved by 0.343934

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.085
ELB improved by 0.287842

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.846
ELB improved by 0.238553

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.648
ELB improved by 0.197775

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.482
ELB improved by 0.165903

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.341
ELB improved by 0.141768

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.217
ELB improved by 0.123583

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.107
ELB improved by 0.109701

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.008
ELB improved by 0.0988809

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.918
ELB improved by 0.0902635

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.835
ELB improved by 0.0832779

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.757
ELB improved by 0.0775468

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.685
ELB improved by 0.0728185

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.616
ELB improved by 0.0689217

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.55
ELB improved by 0.0657367

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.487
ELB improved by 0.0631779

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.426
ELB improved by 0.0611834

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.366
ELB improved by 0.059708

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.307
ELB improved by 0.0587193

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.249
ELB improved by 0.0581946

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.191
ELB improved by 0.0581202

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.132
ELB improved by 0.0584891

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.073
ELB improved by 0.0593015

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.012
ELB improved by 0.0605633

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.95
ELB improved by 0.0622872

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.886
ELB improved by 0.0644918

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.818
ELB improved by 0.0672022

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.748
ELB improved by 0.0704508

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.674
ELB improved by 0.0742772

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.595
ELB improved by 0.0787295

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.511
ELB improved by 0.0838642

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.421
ELB improved by 0.0897471

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.325
ELB improved by 0.0964532

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.221
ELB improved by 0.104066

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.108
ELB improved by 0.112674

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.986
ELB improved by 0.12237

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.853
ELB improved by 0.133241

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.707
ELB improved by 0.145354

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.549
ELB improved by 0.158746

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.375
ELB improved by 0.173388

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.186
ELB improved by 0.189158

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.98
ELB improved by 0.205792

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.757
ELB improved by 0.222842

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.518
ELB improved by 0.239632

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.262
ELB improved by 0.255247

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.994
ELB improved by 0.268576

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.715
ELB improved by 0.278429

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.432
ELB improved by 0.283729

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.148
ELB improved by 0.283745

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.87
ELB improved by 0.278283

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.602
ELB improved by 0.267763

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.349
ELB improved by 0.253127

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.113
ELB improved by 0.235631

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.897
ELB improved by 0.216594

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.699
ELB improved by 0.197186

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.521
ELB improved by 0.178308

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.361
ELB improved by 0.160543

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 0.144185

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.087
ELB improved by 0.129294

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.971
ELB improved by 0.115779

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.868
ELB improved by 0.103496

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.775
ELB improved by 0.0923182

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.693
ELB improved by 0.0821785

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.62
ELB improved by 0.0730564

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.555
ELB improved by 0.0649496

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.497
ELB improved by 0.0578475

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.446
ELB improved by 0.0517251

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.399
ELB improved by 0.046552

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.357
ELB improved by 0.0423107

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.318
ELB improved by 0.0390185

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.281
ELB improved by 0.0367562

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.245
ELB improved by 0.0357074

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.209
ELB improved by 0.0362145

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.17
ELB improved by 0.0388371

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.126
ELB improved by 0.0443342

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.073
ELB improved by 0.0533033

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.008
ELB improved by 0.0650174

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.932
ELB improved by 0.0757179

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.853
ELB improved by 0.0794022

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.779
ELB improved by 0.0736602

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.716
ELB improved by 0.0631075

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.662
ELB improved by 0.0540231

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.612
ELB improved by 0.0494588

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.562
ELB improved by 0.0502475

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.504
ELB improved by 0.0576673

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.428
ELB improved by 0.0759083

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.312
ELB improved by 0.11644

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.105
ELB improved by 0.206574

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.724
ELB improved by 0.381469

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.141
ELB improved by 0.583255

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.496
ELB improved by 0.644726

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.938
ELB improved by 0.557765

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.484
ELB improved by 0.453842

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.083
ELB improved by 0.400935

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.734
ELB improved by 0.348952

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.497
ELB improved by 0.237497

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.374
ELB improved by 0.122605

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.316
ELB improved by 0.0580104

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.285
ELB improved by 0.0308968

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.265
ELB improved by 0.0200871

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.25
ELB improved by 0.0152876

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.237
ELB improved by 0.0127104

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.226
ELB improved by 0.0110414

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.217
ELB improved by 0.00980801

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-846.369
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.785
ELB improved by 273.585

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.115
ELB improved by 63.6701

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.896
ELB improved by 42.2182

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.351
ELB improved by 19.5455

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.06
ELB improved by 9.2913

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.745
ELB improved by 6.31502

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.902
ELB improved by 5.84305

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.882
ELB improved by 6.01934

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.625
ELB improved by 6.25738

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.222
ELB improved by 6.40298

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.945
ELB improved by 6.27709

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.285
ELB improved by 5.65995

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.637
ELB improved by 4.64821

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.117
ELB improved by 3.51937

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.728
ELB improved by 2.38912

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.179
ELB improved by 1.54961

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.098
ELB improved by 1.08085

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.238
ELB improved by 0.859976

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.448
ELB improved by 0.789792

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.652
ELB improved by 0.796156

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.815
ELB improved by 0.836742

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.934
ELB improved by 0.881303

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.121
ELB improved by 0.812728

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.449
ELB improved by 0.671651

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.897
ELB improved by 0.552739

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.49
ELB improved by 0.406504

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.222
ELB improved by 0.267709

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.036
ELB improved by 0.186831

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.889
ELB improved by 0.146461

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.765
ELB improved by 0.123783

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.657
ELB improved by 0.108461

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.56
ELB improved by 0.0966616

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.473
ELB improved by 0.0869104

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.395
ELB improved by 0.078551

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.323
ELB improved by 0.0712406

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.259
ELB improved by 0.0647794

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.2
ELB improved by 0.0590435

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.146
ELB improved by 0.0539516

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.096
ELB improved by 0.0494459

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.051
ELB improved by 0.0454804

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.009
ELB improved by 0.0420129

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.97
ELB improved by 0.039

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.933
ELB improved by 0.0363953

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.899
ELB improved by 0.0341502

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.867
ELB improved by 0.0322156

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.836
ELB improved by 0.030545

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.807
ELB improved by 0.0290963

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.78
ELB improved by 0.0278328

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.753
ELB improved by 0.0267242

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.727
ELB improved by 0.0257454

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.702
ELB improved by 0.0248764

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.678
ELB improved by 0.0241014

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.655
ELB improved by 0.0234075

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.632
ELB improved by 0.0227848

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.61
ELB improved by 0.0222252

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.588
ELB improved by 0.021722

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.567
ELB improved by 0.0212698

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.546
ELB improved by 0.020864

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.525
ELB improved by 0.0205008

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.505
ELB improved by 0.0201766

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.485
ELB improved by 0.0198886

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.466
ELB improved by 0.0196338

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.446
ELB improved by 0.0194098

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.427
ELB improved by 0.0192142

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.408
ELB improved by 0.0190446

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.389
ELB improved by 0.0188988

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.37
ELB improved by 0.0187748

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.352
ELB improved by 0.0186703

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.333
ELB improved by 0.0185833

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.314
ELB improved by 0.0185118

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.296
ELB improved by 0.0184536

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.278
ELB improved by 0.0184069

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.259
ELB improved by 0.0183694

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.241
ELB improved by 0.0183393

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.223
ELB improved by 0.0183147

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.204
ELB improved by 0.0182935

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.186
ELB improved by 0.0182739

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.168
ELB improved by 0.0182541

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.15
ELB improved by 0.0182324

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.131
ELB improved by 0.018207

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.113
ELB improved by 0.0181765

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.095
ELB improved by 0.0181395

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.077
ELB improved by 0.0180947

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.059
ELB improved by 0.0180409

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.041
ELB improved by 0.0179775

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.023
ELB improved by 0.0179036

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.005
ELB improved by 0.0178189

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.987
ELB improved by 0.0177232

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.97
ELB improved by 0.0176167

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.952
ELB improved by 0.0174998

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.935
ELB improved by 0.0173732

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.918
ELB improved by 0.0172382

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.901
ELB improved by 0.017096

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.884
ELB improved by 0.0169484

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.867
ELB improved by 0.0167975

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.85
ELB improved by 0.0166458

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.834
ELB improved by 0.0164959

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.817
ELB improved by 0.0163509

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.801
ELB improved by 0.016214

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.785
ELB improved by 0.0160887

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.769
ELB improved by 0.0159787

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.753
ELB improved by 0.0158876

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.737
ELB improved by 0.0158189

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.722
ELB improved by 0.0157759

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.706
ELB improved by 0.015761

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.69
ELB improved by 0.0157759

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.674
ELB improved by 0.0158204

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.658
ELB improved by 0.015892

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.642
ELB improved by 0.0159854

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.626
ELB improved by 0.0160911

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.61
ELB improved by 0.0161952

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.594
ELB improved by 0.0162792

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.578
ELB improved by 0.0163201

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.561
ELB improved by 0.0162925

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.545
ELB improved by 0.0161711

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.529
ELB improved by 0.0159343

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.514
ELB improved by 0.0155682

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.498
ELB improved by 0.0150699

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.484
ELB improved by 0.0144487

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.47
ELB improved by 0.013725

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.457
ELB improved by 0.0129272

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.445
ELB improved by 0.0120869

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.434
ELB improved by 0.0112346

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.424
ELB improved by 0.0103958

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.414
ELB improved by 0.00958979

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-824.746
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.487
ELB improved by 268.259

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.191
ELB improved by 56.2963

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.927
ELB improved by 34.2631

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.292
ELB improved by 14.6357

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.91
ELB improved by 6.38216

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.057
ELB improved by 3.85296

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.03
ELB improved by 3.02716

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.259
ELB improved by 2.77087

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.537
ELB improved by 2.72185

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.812
ELB improved by 2.72506

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.148
ELB improved by 2.66387

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.694
ELB improved by 2.4538

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.599
ELB improved by 2.09478

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.923
ELB improved by 1.67654

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.617
ELB improved by 1.30597

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.576
ELB improved by 1.04066

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.692
ELB improved by 0.884033

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.879
ELB improved by 0.813325

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.076
ELB improved by 0.802633

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.244
ELB improved by 0.831919

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.356
ELB improved by 0.887751

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.395
ELB improved by 0.961512

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.347
ELB improved by 1.04765

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.205
ELB improved by 1.1422

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.964
ELB improved by 1.24091

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.627
ELB improved by 1.33703

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.207
ELB improved by 1.42038

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.73
ELB improved by 1.47636

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.248
ELB improved by 1.48237

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.834
ELB improved by 1.41378

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.566
ELB improved by 1.26859

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.492
ELB improved by 1.07416

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.638
ELB improved by 0.853602

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.011
ELB improved by 0.627048

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.574
ELB improved by 0.436879

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.269
ELB improved by 0.305248

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.048
ELB improved by 0.220738

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.882
ELB improved by 0.165739

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.754
ELB improved by 0.128442

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.652
ELB improved by 0.102173

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.569
ELB improved by 0.0831054

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.5
ELB improved by 0.0689084

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.442
ELB improved by 0.0580902

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.392
ELB improved by 0.0496667

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.349
ELB improved by 0.0429756

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.311
ELB improved by 0.0375631

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.278
ELB improved by 0.0331129

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.249
ELB improved by 0.0294008

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.223
ELB improved by 0.0262651

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.199
ELB improved by 0.0235869

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.178
ELB improved by 0.0212778

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.158
ELB improved by 0.0192707

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.141
ELB improved by 0.0175136

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.125
ELB improved by 0.0159664

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.11
ELB improved by 0.0145968

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.097
ELB improved by 0.013379

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.085
ELB improved by 0.0122921

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.073
ELB improved by 0.0113186

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.063
ELB improved by 0.0104443

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.053
ELB improved by 0.00965688

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-851.655
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.218
ELB improved by 279.437

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.846
ELB improved by 56.3724

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.135
ELB improved by 36.7105

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.926
ELB improved by 17.2089

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.756
ELB improved by 7.17017

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.874
ELB improved by 3.8816

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.818
ELB improved by 3.05617

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.92
ELB improved by 2.89778

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.018
ELB improved by 2.9024

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.113
ELB improved by 2.90502

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.315
ELB improved by 2.7978

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.803
ELB improved by 2.51221

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.742
ELB improved by 2.061

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.194
ELB improved by 1.54811

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.098
ELB improved by 1.09571

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.341
ELB improved by 0.757124

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.819
ELB improved by 0.521882

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.452
ELB improved by 0.366901

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.182
ELB improved by 0.270018

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.973
ELB improved by 0.209719

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.802
ELB improved by 0.1705

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.659
ELB improved by 0.143527

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.534
ELB improved by 0.124112

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.425
ELB improved by 0.109663

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.326
ELB improved by 0.0986315

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.236
ELB improved by 0.0900188

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.153
ELB improved by 0.0831581

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.075
ELB improved by 0.0775961

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.002
ELB improved by 0.0730232

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.933
ELB improved by 0.0692258

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.867
ELB improved by 0.0660542

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.804
ELB improved by 0.0634

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.742
ELB improved by 0.0611822

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.683
ELB improved by 0.0593378

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.625
ELB improved by 0.0578155

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.569
ELB improved by 0.0565721

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.513
ELB improved by 0.0555696

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.458
ELB improved by 0.0547736

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.404
ELB improved by 0.0541521

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.351
ELB improved by 0.0536748

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.297
ELB improved by 0.0533122

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.244
ELB improved by 0.0530363

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.191
ELB improved by 0.0528196

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.139
ELB improved by 0.0526361

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.086
ELB improved by 0.0524611

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.034
ELB improved by 0.0522721

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.982
ELB improved by 0.0520494

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.93
ELB improved by 0.0517761

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.879
ELB improved by 0.0514393

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.828
ELB improved by 0.0510304

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.777
ELB improved by 0.0505452

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.727
ELB improved by 0.0499841

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.678
ELB improved by 0.049352

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.629
ELB improved by 0.0486581

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.581
ELB improved by 0.0479154

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.534
ELB improved by 0.0471398

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.488
ELB improved by 0.0463496

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.442
ELB improved by 0.0455651

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.397
ELB improved by 0.0448076

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.353
ELB improved by 0.044099

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.31
ELB improved by 0.0434621

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.267
ELB improved by 0.0429203

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.224
ELB improved by 0.0424982

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.182
ELB improved by 0.0422225

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.14
ELB improved by 0.0421239

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.098
ELB improved by 0.042239

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.055
ELB improved by 0.0426143

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.012
ELB improved by 0.043311

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.967
ELB improved by 0.0444127

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.921
ELB improved by 0.046036

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.873
ELB improved by 0.0483441

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.822
ELB improved by 0.0515624

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.766
ELB improved by 0.0559861

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.704
ELB improved by 0.0619595

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.634
ELB improved by 0.0697818

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.554
ELB improved by 0.0795009

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.464
ELB improved by 0.0906635

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.361
ELB improved by 0.102331

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.248
ELB improved by 0.11361

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.124
ELB improved by 0.12401

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.991
ELB improved by 0.132324

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.856
ELB improved by 0.135118

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.727
ELB improved by 0.129045

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.611
ELB improved by 0.116211

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.508
ELB improved by 0.102953

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.415
ELB improved by 0.0930398

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.329
ELB improved by 0.086331

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.247
ELB improved by 0.0815249

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.17
ELB improved by 0.077634

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.095
ELB improved by 0.0741006

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.025
ELB improved by 0.0706323

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.958
ELB improved by 0.067087

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.894
ELB improved by 0.0634137

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.835
ELB improved by 0.0596188

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.779
ELB improved by 0.0557435

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.727
ELB improved by 0.0518467

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.679
ELB improved by 0.0479912

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.635
ELB improved by 0.0442345

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.594
ELB improved by 0.0406221

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.557
ELB improved by 0.0371848

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.523
ELB improved by 0.0339392

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.492
ELB improved by 0.0308902

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.464
ELB improved by 0.0280349

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.439
ELB improved by 0.0253665

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.416
ELB improved by 0.0228777

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.395
ELB improved by 0.0205631

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.377
ELB improved by 0.0184197

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.361
ELB improved by 0.0164463

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.346
ELB improved by 0.014642

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.333
ELB improved by 0.0130052

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.321
ELB improved by 0.0115323

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.311
ELB improved by 0.0102173

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.302
ELB improved by 0.00905185

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  3.455   0.527  28.701

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.052	0.021	0.415
getPIPs	0.044	0.013	0.211
graper	0.088	0.020	0.186
makeExampleData	0.008	0.002	0.020
makeExampleDataWithUnequalGroups	0.010	0.001	0.011
plotELBO	0.307	0.026	0.897
plotGroupPenalties	1.181	0.050	2.171
plotPosterior	1.002	0.054	2.586
predict.graper	1.797	0.119	2.703
print.graper	0.044	0.014	0.204