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This page was generated on 2025-04-09 11:56 -0400 (Wed, 09 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 beta (2025-04-02 r88102) -- "How About a Twenty-Six" 4737
palomino8Windows Server 2022 Datacenterx644.5.0 RC (2025-04-03 r88103 ucrt) -- "How About a Twenty-Six" 4524
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1702/2335HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RbowtieCuda 0.99.0  (landing page)
Franck RICHARD
Snapshot Date: 2025-04-08 13:00 -0400 (Tue, 08 Apr 2025)
git_url: https://git.bioconductor.org/packages/RbowtieCuda
git_branch: devel
git_last_commit: 22210a9
git_last_commit_date: 2025-04-07 17:51:19 -0400 (Mon, 07 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped


INSTALL results for RbowtieCuda on palomino8

To the developers/maintainers of the RbowtieCuda package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RbowtieCuda.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: RbowtieCuda
Version: 0.99.0
Command: F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL RbowtieCuda
StartedAt: 2025-04-08 15:24:45 -0400 (Tue, 08 Apr 2025)
EndedAt: 2025-04-08 15:25:04 -0400 (Tue, 08 Apr 2025)
EllapsedTime: 19.4 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL RbowtieCuda
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* installing to library 'F:/biocbuild/bbs-3.22-bioc/R/library'
* installing *source* package 'RbowtieCuda' ...
** this is package 'RbowtieCuda' version '0.99.0'
** using staged installation
** libs
  running 'src/Makefile.win' ...
(cd "../build" && cmake -G "Visual Studio 17 2022" "../src/"nvbio && cmake --build . --parallel 4 --config Release)
/bin/sh: line 1: cd: ../build: No such file or directory
make: *** [Makefile.win:6: all] Error 1
ERROR: compilation failed for package 'RbowtieCuda'
* removing 'F:/biocbuild/bbs-3.22-bioc/R/library/RbowtieCuda'