| Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-04-09 11:56 -0400 (Wed, 09 Apr 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.5.0 beta (2025-04-02 r88102) -- "How About a Twenty-Six" | 4737 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.0 RC (2025-04-03 r88103 ucrt) -- "How About a Twenty-Six" | 4524 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1702/2335 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| RbowtieCuda 0.99.0 (landing page) Franck RICHARD
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
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To the developers/maintainers of the RbowtieCuda package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RbowtieCuda.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: RbowtieCuda |
| Version: 0.99.0 |
| Command: chmod a+r RbowtieCuda -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RbowtieCuda |
| StartedAt: 2025-04-08 21:44:57 -0400 (Tue, 08 Apr 2025) |
| EndedAt: 2025-04-08 21:45:43 -0400 (Tue, 08 Apr 2025) |
| EllapsedTime: 46.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r RbowtieCuda -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RbowtieCuda
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* checking for file 'RbowtieCuda/DESCRIPTION' ... OK
* preparing 'RbowtieCuda':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
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* installing *source* package 'RbowtieCuda' ...
** this is package 'RbowtieCuda' version '0.99.0'
** using staged installation
** libs
running 'src/Makefile.win' ...
(cd "../build" && cmake -G "Visual Studio 17 2022" "../src/"nvbio && cmake --build . --parallel 4 --config Release)
/bin/sh: line 1: cd: ../build: No such file or directory
make: *** [Makefile.win:6: all] Error 1
ERROR: compilation failed for package 'RbowtieCuda'
* removing 'F:/biocbuild/bbs-3.22-bioc/tmpdir/Rtmpa6vTbI/Rinst1f0c858152747/RbowtieCuda'
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ERROR: package installation failed