| Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:20:51 -0400 (Wed, 15 Apr 2020).
| Package 1802/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| waveTiling 1.28.0 Kristof De Beuf
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: waveTiling |
| Version: 1.28.0 |
| Command: rm -rf waveTiling.buildbin-libdir && mkdir waveTiling.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=waveTiling.buildbin-libdir waveTiling_1.28.0.tar.gz |
| StartedAt: 2020-04-15 09:53:40 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 09:54:40 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 59.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: waveTiling_1.28.0.zip |
| PackageFileSize: 914.2 KiB |
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### Running command:
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### rm -rf waveTiling.buildbin-libdir && mkdir waveTiling.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=waveTiling.buildbin-libdir waveTiling_1.28.0.tar.gz
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install for i386
* installing *source* package 'waveTiling' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c waveTiling.c -o waveTiling.o
waveTiling.c: In function 'MAPMARG':
waveTiling.c:10:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGEQSMOOTH':
waveTiling.c:43:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGIMP':
waveTiling.c:81:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGIMPEQSMOOTH':
waveTiling.c:114:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o waveTiling.dll tmp.def waveTiling.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/waveTiling.buildbin-libdir/00LOCK-waveTiling/00new/waveTiling/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
Warning message:
Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
** help
*** installing help indices
converting help for package 'waveTiling'
finding HTML links ... done
GenomeInfo-class html
MapFilterProbe-class html
WaveTilingFeatureSet-class html
finding level-2 HTML links ... done
WfmFit-class html
WfmFitCircadian-class html
WfmFitCustom-class html
WfmFitFactor-class html
WfmFitTime-class html
WfmInf-class html
WfmInfCompare-class html
WfmInfCustom-class html
WfmInfEffects-class html
WfmInfMeans-class html
WfmInfOverallMean-class html
addPheno html
bgCorrQn html
cel2TilingFeatureSet html
filterOverlap html
getNonAnnotatedRegions html
getSigGenes html
makeContrasts html
makeDesign html
plotWfm html
selectProbesFromFilterOverlap html
selectProbesFromTilingFeatureSet html
wfm.fit html
wfm.inference html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'waveTiling' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c waveTiling.c -o waveTiling.o
waveTiling.c: In function 'MAPMARG':
waveTiling.c:10:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGEQSMOOTH':
waveTiling.c:43:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGIMP':
waveTiling.c:81:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
waveTiling.c: In function 'MAPMARGIMPEQSMOOTH':
waveTiling.c:114:11: warning: unused variable 'n' [-Wunused-variable]
int i,j,m,n,Jcount=0;
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o waveTiling.dll tmp.def waveTiling.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/waveTiling.buildbin-libdir/waveTiling/libs/x64
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
* MD5 sums
packaged installation of 'waveTiling' as waveTiling_1.28.0.zip
* DONE (waveTiling)