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INSTALL report for OperaMate on tokay2

This page was generated on 2018-10-17 08:40:39 -0400 (Wed, 17 Oct 2018).

Package 1033/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OperaMate 1.12.0
Chenglin Liu
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/OperaMate
Branch: RELEASE_3_7
Last Commit: 8daf9b6
Last Changed Date: 2018-04-30 10:35:37 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: OperaMate
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/OperaMate_1.12.0.tar.gz && rm -rf OperaMate.buildbin-libdir && mkdir OperaMate.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OperaMate.buildbin-libdir OperaMate_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL OperaMate_1.12.0.zip && rm OperaMate_1.12.0.tar.gz OperaMate_1.12.0.zip
StartedAt: 2018-10-16 19:17:53 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:19:01 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 67.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/OperaMate_1.12.0.tar.gz && rm -rf OperaMate.buildbin-libdir && mkdir OperaMate.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OperaMate.buildbin-libdir OperaMate_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL OperaMate_1.12.0.zip && rm OperaMate_1.12.0.tar.gz OperaMate_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1237k  100 1237k    0     0  17.8M      0 --:--:-- --:--:-- --:--:-- 19.8M

install for i386

* installing *source* package 'OperaMate' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OperaMate'
    finding HTML links ... done
    cellData-class                          html  
    cellLoad                                html  
    cellMean                                html  
    cellNorm                                html  
    cellNumLoad                             html  
    cellQC                                  html  
    cellSig                                 html  
    cellSigAnalysis                         html  
    cellSigAnalysisPlot                     html  
    cellSigPlot                             html  
    cellViz                                 html  
    data                                    html  
    expData-class                           html  
    generateReport                          html  
    loadAll                                 html  
    nameParser                              html  
    operaMate                               html  
    parseTemplete                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: Package 'OperaMate' is deprecated and will be removed from Bioconductor
  version 3.7
In R CMD INSTALL

install for x64

* installing *source* package 'OperaMate' ...
** testing if installed package can be loaded
Warning: Package 'OperaMate' is deprecated and will be removed from Bioconductor
  version 3.7
* MD5 sums
packaged installation of 'OperaMate' as OperaMate_1.12.0.zip
* DONE (OperaMate)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'OperaMate' successfully unpacked and MD5 sums checked
In R CMD INSTALL