| Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:34:48 -0400 (Wed, 17 Oct 2018).
| Package 474/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| fabia 2.26.0 Sepp Hochreiter
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: fabia |
| Version: 2.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/fabia_2.26.0.tar.gz && rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fabia.buildbin-libdir fabia_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL fabia_2.26.0.zip && rm fabia_2.26.0.tar.gz fabia_2.26.0.zip |
| StartedAt: 2018-10-16 18:41:49 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 18:42:58 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 69.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/fabia_2.26.0.tar.gz && rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fabia.buildbin-libdir fabia_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL fabia_2.26.0.zip && rm fabia_2.26.0.tar.gz fabia_2.26.0.zip
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install for i386
* installing *source* package 'fabia' ...
** libs
running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
C:/Rtools/mingw_32/bin/gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -Wall -O3
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386" -lR -o fabia.dll
rm -f fabia.o *.a *.o *.so
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/fabia.buildbin-libdir/fabia/libs/i386
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'fabia'
finding HTML links ... done
Factorization-class html
estimateMode html
extractBic html
extractPlot html
fabi html
fabia html
fabiaDemo html
fabiaVersion html
fabiap html
fabias html
fabiasp html
makeFabiaData html
makeFabiaDataBlocks html
makeFabiaDataBlocksPos html
makeFabiaDataPos html
matrixImagePlot html
mfsc html
nmfdiv html
nmfeu html
nmfsc html
plotBicluster html
projFunc html
projFuncPos html
readSamplesSpfabia html
readSpfabiaResult html
samplesPerFeature html
spfabia html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'fabia' ...
** libs
running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
C:/Rtools/mingw_64/bin/gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -Wall -O3
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64" -lR -o fabia.dll
rm -f fabia.o *.a *.o *.so
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/fabia.buildbin-libdir/fabia/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fabia' as fabia_2.26.0.zip
* DONE (fabia)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'fabia' successfully unpacked and MD5 sums checked
In R CMD INSTALL