Bernat Gel
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/regioneR |
| Branch: RELEASE_3_6 |
| Last Commit: 8fe51e6 |
| Last Changed Date: 2017-10-30 12:40:50 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:26:01 -0400 (Thu, 12 Apr 2018).
| Package 1155/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| regioneR 1.10.0 Bernat Gel
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: regioneR |
| Version: 1.10.0 |
| Command: rm -rf regioneR.buildbin-libdir && mkdir regioneR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/regioneR_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=regioneR.buildbin-libdir --merge-multiarch regioneR_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL regioneR_1.10.0.zip && rm regioneR_1.10.0.tar.gz regioneR_1.10.0.zip |
| StartedAt: 2018-04-11 18:50:00 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:51:05 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 65.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf regioneR.buildbin-libdir && mkdir regioneR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/regioneR_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=regioneR.buildbin-libdir --merge-multiarch regioneR_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL regioneR_1.10.0.zip && rm regioneR_1.10.0.tar.gz regioneR_1.10.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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install for i386
* installing *source* package 'regioneR' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'regioneR'
finding HTML links ... done
characterToBSGenome html
finding level-2 HTML links ... done
circularRandomizeRegions html
commonRegions html
createFunctionsList html
createRandomRegions html
emptyCacheRegioneR html
extendRegions html
filterChromosomes html
getChromosomesByOrganism html
getGenome html
getGenomeAndMask html
getMask html
joinRegions html
listChrTypes html
localZScore html
maskFromBSGenome html
meanDistance html
meanInRegions html
mergeRegions html
numOverlaps html
overlapGraphicalSummary html
overlapPermTest html
overlapRegions html
permTest html
plot.localZScoreResults html
plot.localZScoreResultsList html
plot.permTestResults html
plot.permTestResultsList html
plotRegions html
print.permTestResults html
randomizeRegions html
recomputePermTest html
resampleRegions html
splitRegions html
subtractRegions html
summary.permTestResults html
summary.permTestResultsList html
toDataframe html
toGRanges html
uniqueRegions html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'regioneR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'regioneR' as regioneR_1.10.0.zip
* DONE (regioneR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'regioneR' successfully unpacked and MD5 sums checked
In R CMD INSTALL