Britta Velten
| Snapshot Date: 2025-08-14 13:45 -0400 (Thu, 14 Aug 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-15 12:06 -0400 (Fri, 15 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4554 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4595 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4537 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 905/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.22-bioc\R\library --no-vignettes --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-08-15 03:54:04 -0400 (Fri, 15 Aug 2025) |
| EndedAt: 2025-08-15 03:55:41 -0400 (Fri, 15 Aug 2025) |
| EllapsedTime: 97.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.22-bioc\R\library --no-vignettes --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'F:/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck'
* using R version 4.5.1 (2025-06-13 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'graper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graper' version '1.25.2'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graper' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 14.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.22-bioc/R/library/graper/libs/x64/graper.dll':
Found '_exit', possibly from '_exit' (C)
Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'testthat.R'
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
'F:/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log'
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.22-bioc/R/library' * installing *source* package 'graper' ... ** this is package 'graper' version '1.25.2' ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 14.2.0' g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.22-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/BH/include' -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.22-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/BH/include' -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LF:/biocbuild/bbs-3.22-bioc/R/bin/x64 -lRlapack -LF:/biocbuild/bbs-3.22-bioc/R/bin/x64 -lRblas -lgfortran -lquadmath -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.22-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.22-bioc/R/library/00LOCK-graper/00new/graper/libs/x64 ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13 ucrt) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.968
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.007
ELB improved by 284.961
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-534.48
ELB improved by 57.5272
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.144
ELB improved by 41.3362
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.128
ELB improved by 20.0152
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.04
ELB improved by 8.08793
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.123
ELB improved by 4.91774
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.767
ELB improved by 4.35555
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.488
ELB improved by 4.27866
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.197
ELB improved by 4.29174
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.934
ELB improved by 4.26294
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.862
ELB improved by 4.07166
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.247
ELB improved by 3.61463
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.27
ELB improved by 2.97772
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.916
ELB improved by 2.35394
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.071
ELB improved by 1.84446
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.627
ELB improved by 1.44427
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.51
ELB improved by 1.11727
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.655
ELB improved by 0.854779
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.992
ELB improved by 0.663414
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.46
ELB improved by 0.532132
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.02
ELB improved by 0.440005
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.649
ELB improved by 0.370109
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.336
ELB improved by 0.313127
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.071
ELB improved by 0.265622
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.844
ELB improved by 0.226471
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.65
ELB improved by 0.194611
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.481
ELB improved by 0.168627
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.334
ELB improved by 0.146988
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.206
ELB improved by 0.128332
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.094
ELB improved by 0.111741
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.997
ELB improved by 0.0968847
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.913
ELB improved by 0.0838731
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.84
ELB improved by 0.0729028
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.776
ELB improved by 0.0639755
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.719
ELB improved by 0.0568528
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.668
ELB improved by 0.0511718
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.622
ELB improved by 0.0465721
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.579
ELB improved by 0.0427634
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.539
ELB improved by 0.0395365
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.503
ELB improved by 0.0367492
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.468
ELB improved by 0.0343056
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.436
ELB improved by 0.0321405
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.406
ELB improved by 0.0302074
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.377
ELB improved by 0.0284722
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.351
ELB improved by 0.0269086
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.325
ELB improved by 0.0254959
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.301
ELB improved by 0.0242173
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.278
ELB improved by 0.0230589
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.256
ELB improved by 0.0220094
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.235
ELB improved by 0.0210588
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.215
ELB improved by 0.0201989
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.195
ELB improved by 0.0194221
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.176
ELB improved by 0.0187212
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.158
ELB improved by 0.0180892
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.141
ELB improved by 0.0175182
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.124
ELB improved by 0.0169995
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.107
ELB improved by 0.0165226
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.091
ELB improved by 0.0160753
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.076
ELB improved by 0.0156437
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.06
ELB improved by 0.0152128
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.046
ELB improved by 0.0147674
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.031
ELB improved by 0.0142943
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.017
ELB improved by 0.0137836
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.004
ELB improved by 0.013231
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.992
ELB improved by 0.0126387
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.98
ELB improved by 0.0120151
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.968
ELB improved by 0.0113738
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.957
ELB improved by 0.010731
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.947
ELB improved by 0.0101033
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.938
ELB improved by 0.00950488
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-903.057
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.916
ELB improved by 323.141
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.205
ELB improved by 55.7114
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.437
ELB improved by 33.7673
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.918
ELB improved by 15.5196
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.184
ELB improved by 6.73344
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.23
ELB improved by 3.95433
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.904
ELB improved by 3.32647
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.565
ELB improved by 3.33826
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.95
ELB improved by 3.6149
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.958
ELB improved by 3.99245
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.698
ELB improved by 4.25973
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.553
ELB improved by 4.14513
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.039
ELB improved by 3.51369
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.467
ELB improved by 2.57245
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.762
ELB improved by 1.70473
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.652
ELB improved by 1.11032
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.887
ELB improved by 0.764924
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.309
ELB improved by 0.57773
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.831
ELB improved by 0.478159
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.407
ELB improved by 0.423833
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.019
ELB improved by 0.387876
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.665
ELB improved by 0.353896
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.346
ELB improved by 0.319037
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.058
ELB improved by 0.288353
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.794
ELB improved by 0.264068
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.55
ELB improved by 0.244477
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.322
ELB improved by 0.227398
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.111
ELB improved by 0.211536
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.914
ELB improved by 0.196329
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.733
ELB improved by 0.18161
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.565
ELB improved by 0.167403
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.411
ELB improved by 0.153807
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.271
ELB improved by 0.14094
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.142
ELB improved by 0.128901
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.024
ELB improved by 0.117755
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.916
ELB improved by 0.107532
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.818
ELB improved by 0.098226
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.728
ELB improved by 0.089806
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.646
ELB improved by 0.082221
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.571
ELB improved by 0.0754093
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.501
ELB improved by 0.0693037
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.438
ELB improved by 0.0638365
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.379
ELB improved by 0.0589422
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.324
ELB improved by 0.0545597
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.273
ELB improved by 0.0506331
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.226
ELB improved by 0.0471121
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.182
ELB improved by 0.0439519
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.141
ELB improved by 0.0411132
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.103
ELB improved by 0.0385611
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.066
ELB improved by 0.0362652
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.032
ELB improved by 0.0341991
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426
ELB improved by 0.0323395
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.969
ELB improved by 0.0306661
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.94
ELB improved by 0.0291611
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.912
ELB improved by 0.027809
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.886
ELB improved by 0.0265961
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.86
ELB improved by 0.0255106
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.836
ELB improved by 0.0245418
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.812
ELB improved by 0.0236806
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.789
ELB improved by 0.0229188
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.767
ELB improved by 0.0222493
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.745
ELB improved by 0.0216659
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.724
ELB improved by 0.0211629
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.703
ELB improved by 0.0207357
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.683
ELB improved by 0.0203798
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.663
ELB improved by 0.0200916
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.643
ELB improved by 0.0198678
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.623
ELB improved by 0.0197055
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.604
ELB improved by 0.0196023
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.584
ELB improved by 0.0195558
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.564
ELB improved by 0.019564
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.545
ELB improved by 0.019625
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.525
ELB improved by 0.0197373
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.505
ELB improved by 0.0198989
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.485
ELB improved by 0.0201083
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.465
ELB improved by 0.0203636
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.444
ELB improved by 0.0206629
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.423
ELB improved by 0.021004
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.402
ELB improved by 0.0213843
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.38
ELB improved by 0.0218009
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.358
ELB improved by 0.0222504
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.335
ELB improved by 0.0227285
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.312
ELB improved by 0.0232306
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.288
ELB improved by 0.0237509
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.264
ELB improved by 0.0242831
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.239
ELB improved by 0.0248196
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.213
ELB improved by 0.0253523
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.188
ELB improved by 0.0258717
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.161
ELB improved by 0.0263678
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.134
ELB improved by 0.0268294
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.107
ELB improved by 0.0272451
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.079
ELB improved by 0.0276029
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.052
ELB improved by 0.0278909
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.023
ELB improved by 0.0280972
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.995
ELB improved by 0.028211
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.967
ELB improved by 0.0282224
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.939
ELB improved by 0.0281232
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.911
ELB improved by 0.0279072
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.883
ELB improved by 0.0275707
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.856
ELB improved by 0.0271127
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.83
ELB improved by 0.0265351
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.804
ELB improved by 0.0258429
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.779
ELB improved by 0.0250437
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.755
ELB improved by 0.0241479
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.732
ELB improved by 0.0231679
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.709
ELB improved by 0.0221182
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.688
ELB improved by 0.021014
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.669
ELB improved by 0.0198715
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.65
ELB improved by 0.0187067
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.632
ELB improved by 0.0175351
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.616
ELB improved by 0.0163711
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.601
ELB improved by 0.015228
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.587
ELB improved by 0.014117
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.574
ELB improved by 0.013048
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.562
ELB improved by 0.0120286
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.551
ELB improved by 0.0110648
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.54
ELB improved by 0.0101606
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.531
ELB improved by 0.00931875
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-844.954
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.754
ELB improved by 288.201
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.001
ELB improved by 55.7528
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.828
ELB improved by 36.1732
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.914
ELB improved by 14.9135
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.663
ELB improved by 5.25088
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.02
ELB improved by 2.64303
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.249
ELB improved by 1.77131
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.852
ELB improved by 1.39722
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.639
ELB improved by 1.21303
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.526
ELB improved by 1.1126
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.472
ELB improved by 1.05453
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.45
ELB improved by 1.02174
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.442
ELB improved by 1.00792
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.431
ELB improved by 1.01133
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.399
ELB improved by 1.03153
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.332
ELB improved by 1.06755
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.215
ELB improved by 1.1167
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.041
ELB improved by 1.17404
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.81
ELB improved by 1.23104
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.537
ELB improved by 1.27244
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.26
ELB improved by 1.27706
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.027
ELB improved by 1.23293
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.876
ELB improved by 1.15178
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.816
ELB improved by 1.05907
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.842
ELB improved by 0.97428
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.939
ELB improved by 0.903574
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.095
ELB improved by 0.843604
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.307
ELB improved by 0.787987
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.574
ELB improved by 0.733225
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.892
ELB improved by 0.681539
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.253
ELB improved by 0.638854
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.642
ELB improved by 0.611025
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.041
ELB improved by 0.601589
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.43
ELB improved by 0.610654
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.794
ELB improved by 0.636315
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.112
ELB improved by 0.682283
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.365
ELB improved by 0.746965
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.592
ELB improved by 0.772138
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.881
ELB improved by 0.711263
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.26
ELB improved by 0.621129
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.716
ELB improved by 0.543774
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.235
ELB improved by 0.48126
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.804
ELB improved by 0.430942
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.41
ELB improved by 0.394092
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.038
ELB improved by 0.371561
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.685
ELB improved by 0.353723
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.362
ELB improved by 0.322358
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.084
ELB improved by 0.278697
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.838
ELB improved by 0.245556
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.244027
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.297
ELB improved by 0.297248
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.881
ELB improved by 0.41531
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.397
ELB improved by 0.484842
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.999
ELB improved by 0.397527
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.725
ELB improved by 0.273677
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.538
ELB improved by 0.187377
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.404
ELB improved by 0.134226
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.302
ELB improved by 0.101464
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.222
ELB improved by 0.0804993
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.156
ELB improved by 0.0663322
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.099
ELB improved by 0.0561923
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.051
ELB improved by 0.0485632
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.008
ELB improved by 0.0425981
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.97
ELB improved by 0.037802
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.937
ELB improved by 0.0338674
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.906
ELB improved by 0.0305923
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.878
ELB improved by 0.0278368
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.853
ELB improved by 0.0255004
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.829
ELB improved by 0.0235083
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.807
ELB improved by 0.021804
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.787
ELB improved by 0.0203432
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.768
ELB improved by 0.0190907
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.75
ELB improved by 0.0180179
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.733
ELB improved by 0.0171007
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.716
ELB improved by 0.0163191
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.701
ELB improved by 0.015655
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.686
ELB improved by 0.0150926
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.671
ELB improved by 0.014617
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.657
ELB improved by 0.014214
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.643
ELB improved by 0.0138693
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.629
ELB improved by 0.0135683
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.616
ELB improved by 0.0132958
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.603
ELB improved by 0.0130357
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.59
ELB improved by 0.0127713
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.578
ELB improved by 0.012486
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.566
ELB improved by 0.0121642
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.554
ELB improved by 0.0117929
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.542
ELB improved by 0.0113634
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.532
ELB improved by 0.0108733
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.521
ELB improved by 0.0103264
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.512
ELB improved by 0.00973372
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.841
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.243
ELB improved by 303.598
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.298
ELB improved by 52.9449
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.044
ELB improved by 31.2543
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.277
ELB improved by 13.7667
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.835
ELB improved by 6.44175
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.345
ELB improved by 4.49008
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.035
ELB improved by 4.31055
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.337
ELB improved by 4.69783
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.207
ELB improved by 5.13021
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.101
ELB improved by 5.10579
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.693
ELB improved by 4.40742
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.368
ELB improved by 3.32579
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.046
ELB improved by 2.32124
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.44
ELB improved by 1.60599
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.272
ELB improved by 1.16843
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.349
ELB improved by 0.922963
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.568
ELB improved by 0.781063
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.882
ELB improved by 0.686172
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.27
ELB improved by 0.611791
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.722
ELB improved by 0.547711
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.232
ELB improved by 0.490743
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.791
ELB improved by 0.440185
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.395
ELB improved by 0.395873
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.038
ELB improved by 0.357516
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.713
ELB improved by 0.324592
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.417
ELB improved by 0.29643
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.145
ELB improved by 0.272316
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.893
ELB improved by 0.251563
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.66
ELB improved by 0.233556
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.442
ELB improved by 0.217764
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.238
ELB improved by 0.203743
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.047
ELB improved by 0.191132
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.867
ELB improved by 0.179647
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.698
ELB improved by 0.169074
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.539
ELB improved by 0.159259
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.389
ELB improved by 0.150101
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.247
ELB improved by 0.141539
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.114
ELB improved by 0.133541
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.988
ELB improved by 0.126094
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.868
ELB improved by 0.119186
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.756
ELB improved by 0.1128
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.649
ELB improved by 0.106911
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.547
ELB improved by 0.101478
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.451
ELB improved by 0.0964567
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.359
ELB improved by 0.0917995
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.272
ELB improved by 0.0874672
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.188
ELB improved by 0.0834329
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.108
ELB improved by 0.0796835
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.032
ELB improved by 0.0762157
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.959
ELB improved by 0.0730293
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.889
ELB improved by 0.0701192
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.822
ELB improved by 0.0674677
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.757
ELB improved by 0.0650409
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.694
ELB improved by 0.0627893
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.633
ELB improved by 0.0606568
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.574
ELB improved by 0.0585992
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.518
ELB improved by 0.0566094
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.463
ELB improved by 0.0547444
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.41
ELB improved by 0.0531381
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.358
ELB improved by 0.0519836
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.307
ELB improved by 0.0514679
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.255
ELB improved by 0.0516393
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.0522196
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.15
ELB improved by 0.0524611
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.099
ELB improved by 0.0512921
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.051
ELB improved by 0.0479034
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.009
ELB improved by 0.042384
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.973
ELB improved by 0.035702
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.944
ELB improved by 0.029031
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.921
ELB improved by 0.0231587
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.902
ELB improved by 0.0183759
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.888
ELB improved by 0.0146508
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.876
ELB improved by 0.0118175
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.866
ELB improved by 0.00968655
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.28 0.28 2.56
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.04 | 0.02 | 0.06 | |
| getPIPs | 0.05 | 0.00 | 0.05 | |
| graper | 0.14 | 0.00 | 0.14 | |
| makeExampleData | 0.01 | 0.00 | 0.02 | |
| makeExampleDataWithUnequalGroups | 0.02 | 0.00 | 0.01 | |
| plotELBO | 0.25 | 0.00 | 0.25 | |
| plotGroupPenalties | 0.92 | 0.03 | 0.96 | |
| plotPosterior | 0.63 | 0.01 | 0.64 | |
| predict.graper | 2.03 | 0.05 | 2.08 | |
| print.graper | 0.08 | 0.00 | 0.07 | |