Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-10-20 12:03 -0400 (Mon, 20 Oct 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4887 |
lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4677 |
kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4622 |
taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4632 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 918/2353 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | ![]() | ||||||||
taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: graper |
Version: 1.25.2 |
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
StartedAt: 2025-10-20 00:34:08 -0400 (Mon, 20 Oct 2025) |
EndedAt: 2025-10-20 00:35:37 -0400 (Mon, 20 Oct 2025) |
EllapsedTime: 89.1 seconds |
RetCode: 0 |
Status: OK |
CheckDir: graper.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’ * using R version 4.5.1 Patched (2025-08-23 r88802) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 * running under: Ubuntu 24.04.3 LTS * using session charset: UTF-8 * checking for file ‘graper/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘graper’ version ‘1.25.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘graper’ can be installed ... OK * used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ * checking installed package size ... INFO installed size is 6.0Mb sub-directories of 1Mb or more: libs 5.8Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’ for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(graper) > > test_check("graper") iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-827.048 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-572.608 ELB improved by 254.44 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-506.999 ELB improved by 65.6087 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-457.233 ELB improved by 49.7664 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.128 ELB improved by 24.1043 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.451 ELB improved by 9.67766 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.159 ELB improved by 5.29203 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.405 ELB improved by 3.75395 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.302 ELB improved by 3.10259 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.403 ELB improved by 2.89877 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.474 ELB improved by 2.92947 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.408 ELB improved by 3.06602 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.202 ELB improved by 3.20592 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-395.966 ELB improved by 3.23581 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-392.915 ELB improved by 3.05088 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-390.28 ELB improved by 2.63575 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-388.172 ELB improved by 2.10805 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-386.548 ELB improved by 1.62405 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-385.288 ELB improved by 1.25932 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-384.28 ELB improved by 1.00813 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-383.443 ELB improved by 0.837191 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.728 ELB improved by 0.714549 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-382.11 ELB improved by 0.618213 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.573 ELB improved by 0.537435 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.103 ELB improved by 0.469211 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-380.69 ELB improved by 0.413392 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-380.32 ELB improved by 0.369749 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-379.983 ELB improved by 0.337651 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-379.665 ELB improved by 0.317299 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-379.354 ELB improved by 0.31129 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-379.028 ELB improved by 0.326117 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-378.655 ELB improved by 0.373407 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-378.186 ELB improved by 0.468453 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-377.574 ELB improved by 0.611824 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-376.844 ELB improved by 0.730138 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-376.128 ELB improved by 0.716476 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-375.527 ELB improved by 0.600865 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-375.04 ELB improved by 0.486929 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-374.631 ELB improved by 0.408667 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-374.275 ELB improved by 0.356164 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-373.956 ELB improved by 0.318662 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-373.666 ELB improved by 0.289901 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-373.4 ELB improved by 0.266266 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-373.155 ELB improved by 0.245642 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.928 ELB improved by 0.226886 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.718 ELB improved by 0.209519 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.525 ELB improved by 0.193518 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.345 ELB improved by 0.179189 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.178 ELB improved by 0.167115 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.02 ELB improved by 0.158207 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-371.866 ELB improved by 0.153913 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-371.71 ELB improved by 0.156663 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-371.539 ELB improved by 0.170371 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-371.34 ELB improved by 0.199112 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-371.103 ELB improved by 0.237329 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.85 ELB improved by 0.252768 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.632 ELB improved by 0.2177 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.464 ELB improved by 0.168121 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.328 ELB improved by 0.135831 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.214 ELB improved by 0.114028 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.118 ELB improved by 0.0958147 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.038 ELB improved by 0.0803302 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.97 ELB improved by 0.0676882 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.913 ELB improved by 0.0576737 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.863 ELB improved by 0.0499396 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.819 ELB improved by 0.0441718 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.779 ELB improved by 0.0401162 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.741 ELB improved by 0.0375631 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.705 ELB improved by 0.0363021 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.669 ELB improved by 0.0360329 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.632 ELB improved by 0.0362308 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.596 ELB improved by 0.0360447 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.562 ELB improved by 0.0344368 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.531 ELB improved by 0.0307277 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.506 ELB improved by 0.0252202 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.487 ELB improved by 0.0191353 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.473 ELB improved by 0.013765 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.463 ELB improved by 0.00974646 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-885.011 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-559.654 ELB improved by 325.357 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-499.124 ELB improved by 60.53 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-466.445 ELB improved by 32.6782 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-452.613 ELB improved by 13.8328 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-445.799 ELB improved by 6.81398 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-441.221 ELB improved by 4.57802 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.54 ELB improved by 3.68063 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-434.229 ELB improved by 3.31101 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.114 ELB improved by 3.11455 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.166 ELB improved by 2.94834 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.408 ELB improved by 2.75784 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.898 ELB improved by 2.51045 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.705 ELB improved by 2.193 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.882 ELB improved by 1.82304 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.441 ELB improved by 1.44037 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.353 ELB improved by 1.08811 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.555 ELB improved by 0.797999 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.974 ELB improved by 0.581281 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.544 ELB improved by 0.430214 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.215 ELB improved by 0.328294 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.956 ELB improved by 0.259452 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.744 ELB improved by 0.211755 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.567 ELB improved by 0.177429 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.415 ELB improved by 0.151699 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.283 ELB improved by 0.13168 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.168 ELB improved by 0.115612 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.065 ELB improved by 0.102396 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.974 ELB improved by 0.0913165 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.892 ELB improved by 0.0818927 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.818 ELB improved by 0.0737861 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.752 ELB improved by 0.06675 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.691 ELB improved by 0.0605988 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.636 ELB improved by 0.0551891 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.585 ELB improved by 0.0504071 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.539 ELB improved by 0.0461612 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.497 ELB improved by 0.0423764 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.458 ELB improved by 0.0389907 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.422 ELB improved by 0.0359524 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.389 ELB improved by 0.0332177 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.358 ELB improved by 0.0307496 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.329 ELB improved by 0.0285164 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.303 ELB improved by 0.0264911 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.278 ELB improved by 0.0246502 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.255 ELB improved by 0.0229735 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.234 ELB improved by 0.0214434 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.214 ELB improved by 0.0200444 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.195 ELB improved by 0.0187632 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.178 ELB improved by 0.0175878 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.161 ELB improved by 0.0165079 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.146 ELB improved by 0.0155143 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.131 ELB improved by 0.0145986 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.117 ELB improved by 0.0137537 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.104 ELB improved by 0.0129731 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.092 ELB improved by 0.0122509 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.08 ELB improved by 0.011582 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.069 ELB improved by 0.0109618 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.059 ELB improved by 0.010386 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.049 ELB improved by 0.00985083 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-868.198 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-622.682 ELB improved by 245.516 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-565.058 ELB improved by 57.6245 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-515.23 ELB improved by 49.8281 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-483.312 ELB improved by 31.9177 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-468.112 ELB improved by 15.1998 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-460.588 ELB improved by 7.52415 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-455.05 ELB improved by 5.53788 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-449.963 ELB improved by 5.0872 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-445.246 ELB improved by 4.71689 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-441.256 ELB improved by 3.99029 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.235 ELB improved by 3.02032 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-436.129 ELB improved by 2.1061 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-434.725 ELB improved by 1.40436 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.783 ELB improved by 0.942212 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.112 ELB improved by 0.670878 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.597 ELB improved by 0.515327 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.175 ELB improved by 0.421543 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.815 ELB improved by 0.360312 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.498 ELB improved by 0.317139 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.213 ELB improved by 0.284869 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.953 ELB improved by 0.259857 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.713 ELB improved by 0.240089 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.488 ELB improved by 0.224273 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.277 ELB improved by 0.211462 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.076 ELB improved by 0.200906 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.884 ELB improved by 0.192009 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.7 ELB improved by 0.184297 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.522 ELB improved by 0.177401 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.351 ELB improved by 0.171045 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.186 ELB improved by 0.165034 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.027 ELB improved by 0.15925 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.873 ELB improved by 0.153654 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.725 ELB improved by 0.14828 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.582 ELB improved by 0.143236 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.443 ELB improved by 0.138703 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.308 ELB improved by 0.134946 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.176 ELB improved by 0.132319 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.045 ELB improved by 0.131273 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.912 ELB improved by 0.132336 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.776 ELB improved by 0.135973 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.634 ELB improved by 0.142219 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.484 ELB improved by 0.150043 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.327 ELB improved by 0.15705 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.166 ELB improved by 0.160574 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.007 ELB improved by 0.159815 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.85 ELB improved by 0.156269 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.698 ELB improved by 0.151951 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.55 ELB improved by 0.148022 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.406 ELB improved by 0.14484 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.263 ELB improved by 0.142416 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.122 ELB improved by 0.140697 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.983 ELB improved by 0.139662 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.843 ELB improved by 0.139392 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.703 ELB improved by 0.140156 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.561 ELB improved by 0.142561 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.413 ELB improved by 0.147799 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.255 ELB improved by 0.157934 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.079 ELB improved by 0.175936 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.874 ELB improved by 0.204783 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.627 ELB improved by 0.247507 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.309 ELB improved by 0.317946 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.859 ELB improved by 0.449535 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.269 ELB improved by 0.589849 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.694 ELB improved by 0.575427 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.187 ELB improved by 0.506537 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.689 ELB improved by 0.498159 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.194 ELB improved by 0.495678 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.765 ELB improved by 0.428408 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.433 ELB improved by 0.332288 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.173 ELB improved by 0.259673 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.959 ELB improved by 0.214521 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.774 ELB improved by 0.184399 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.614 ELB improved by 0.16009 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.477 ELB improved by 0.137655 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.361 ELB improved by 0.115861 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.266 ELB improved by 0.0947636 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.191 ELB improved by 0.0753589 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.132 ELB improved by 0.0587509 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.086 ELB improved by 0.0453931 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.051 ELB improved by 0.0350782 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.024 ELB improved by 0.0272858 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.003 ELB improved by 0.0214527 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.985 ELB improved by 0.0170913 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.972 ELB improved by 0.0138193 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.96 ELB improved by 0.0113498 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.951 ELB improved by 0.00947301 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-870.642 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-568.067 ELB improved by 302.575 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-510.573 ELB improved by 57.4937 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-476.387 ELB improved by 34.1862 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-461.664 ELB improved by 14.7224 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-455.17 ELB improved by 6.49432 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-451.348 ELB improved by 3.82236 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-448.344 ELB improved by 3.00358 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-445.668 ELB improved by 2.67562 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-443.192 ELB improved by 2.47622 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-440.909 ELB improved by 2.28334 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.856 ELB improved by 2.05324 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.077 ELB improved by 1.7785 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.604 ELB improved by 1.47344 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-434.436 ELB improved by 1.16771 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.541 ELB improved by 0.894838 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.866 ELB improved by 0.675535 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.354 ELB improved by 0.511948 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.959 ELB improved by 0.39482 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.647 ELB improved by 0.31213 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.393 ELB improved by 0.253546 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.182 ELB improved by 0.211464 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.001 ELB improved by 0.180605 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.844 ELB improved by 0.157395 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.704 ELB improved by 0.139458 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.579 ELB improved by 0.125237 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.465 ELB improved by 0.113717 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.361 ELB improved by 0.10423 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.265 ELB improved by 0.0963278 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.175 ELB improved by 0.0896973 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.091 ELB improved by 0.0841145 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.011 ELB improved by 0.0794123 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.936 ELB improved by 0.0754629 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.864 ELB improved by 0.0721661 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.794 ELB improved by 0.0694419 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.727 ELB improved by 0.0672256 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.662 ELB improved by 0.0654643 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.598 ELB improved by 0.0641142 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.534 ELB improved by 0.063139 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.472 ELB improved by 0.0625081 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.41 ELB improved by 0.0621957 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.348 ELB improved by 0.0621798 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.285 ELB improved by 0.0624415 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.222 ELB improved by 0.0629642 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.158 ELB improved by 0.0637336 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.094 ELB improved by 0.064737 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.028 ELB improved by 0.0659629 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.96 ELB improved by 0.0674014 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.891 ELB improved by 0.0690439 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.82 ELB improved by 0.070883 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.747 ELB improved by 0.0729129 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.672 ELB improved by 0.0751291 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.595 ELB improved by 0.0775291 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.515 ELB improved by 0.0801121 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.432 ELB improved by 0.0828789 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.346 ELB improved by 0.0858321 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.257 ELB improved by 0.0889755 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.165 ELB improved by 0.0923134 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.069 ELB improved by 0.0958501 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.969 ELB improved by 0.0995886 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.866 ELB improved by 0.103529 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.758 ELB improved by 0.10767 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.646 ELB improved by 0.112001 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.53 ELB improved by 0.116511 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.408 ELB improved by 0.121182 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.282 ELB improved by 0.125992 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.151 ELB improved by 0.130925 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.015 ELB improved by 0.135972 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.874 ELB improved by 0.141153 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.728 ELB improved by 0.146537 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.576 ELB improved by 0.15228 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.417 ELB improved by 0.15867 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.251 ELB improved by 0.166191 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.075 ELB improved by 0.175549 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.887 ELB improved by 0.187601 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.685 ELB improved by 0.20295 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.464 ELB improved by 0.22101 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.225 ELB improved by 0.238817 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.974 ELB improved by 0.251131 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.72 ELB improved by 0.253246 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.476 ELB improved by 0.244253 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.249 ELB improved by 0.22694 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.044 ELB improved by 0.205236 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.862 ELB improved by 0.182388 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.701 ELB improved by 0.160525 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.56 ELB improved by 0.140818 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.436 ELB improved by 0.123789 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.327 ELB improved by 0.109599 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.229 ELB improved by 0.098263 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.139 ELB improved by 0.0897921 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.054 ELB improved by 0.0842739 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.973 ELB improved by 0.0819075 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.89 ELB improved by 0.0829598 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.802 ELB improved by 0.0875707 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.707 ELB improved by 0.0953602 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.602 ELB improved by 0.105119 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.486 ELB improved by 0.115616 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.357 ELB improved by 0.128741 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.204 ELB improved by 0.153679 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-422 ELB improved by 0.203875 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.73 ELB improved by 0.269418 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.433 ELB improved by 0.297427 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.167 ELB improved by 0.265407 iteration 104 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.964 ELB improved by 0.202968 iteration 105 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.819 ELB improved by 0.145318 iteration 106 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.706 ELB improved by 0.112736 iteration 107 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.602 ELB improved by 0.103898 iteration 108 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.494 ELB improved by 0.108629 iteration 109 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.377 ELB improved by 0.116487 iteration 110 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.254 ELB improved by 0.123608 iteration 111 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.114 ELB improved by 0.139298 iteration 112 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.933 ELB improved by 0.181008 iteration 113 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.678 ELB improved by 0.255889 iteration 114 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.346 ELB improved by 0.332021 iteration 115 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.972 ELB improved by 0.373026 iteration 116 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.549 ELB improved by 0.423473 iteration 117 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.035 ELB improved by 0.513952 iteration 118 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.528 ELB improved by 0.506691 iteration 119 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.174 ELB improved by 0.354414 iteration 120 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.967 ELB improved by 0.207159 iteration 121 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.849 ELB improved by 0.117856 iteration 122 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.779 ELB improved by 0.0697779 iteration 123 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.735 ELB improved by 0.0439869 iteration 124 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.705 ELB improved by 0.0297673 iteration 125 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.684 ELB improved by 0.0216303 iteration 126 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.667 ELB improved by 0.016773 iteration 127 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.653 ELB improved by 0.0137471 iteration 128 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.641 ELB improved by 0.0117893 iteration 129 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.631 ELB improved by 0.0104871 iteration 130 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.621 ELB improved by 0.00960995 ELB converged [ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ] > > proc.time() user system elapsed 2.116 0.185 2.289
graper.Rcheck/graper-Ex.timings
name | user | system | elapsed | |
coef.graper | 0.050 | 0.004 | 0.054 | |
getPIPs | 0.050 | 0.009 | 0.059 | |
graper | 0.079 | 0.008 | 0.087 | |
makeExampleData | 0.009 | 0.001 | 0.011 | |
makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
plotELBO | 0.313 | 0.037 | 0.351 | |
plotGroupPenalties | 1.079 | 0.041 | 1.120 | |
plotPosterior | 0.641 | 0.012 | 0.652 | |
predict.graper | 2.067 | 0.014 | 2.082 | |
print.graper | 0.046 | 0.006 | 0.051 | |