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This page was generated on 2025-10-20 12:03 -0400 (Mon, 20 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4887
lconwaymacOS 12.7.6 Montereyx86_644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4677
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4622
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4632
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 918/2353HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.25.2  (landing page)
Britta Velten
Snapshot Date: 2025-10-19 13:45 -0400 (Sun, 19 Oct 2025)
git_url: https://git.bioconductor.org/packages/graper
git_branch: devel
git_last_commit: 82b0592
git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.6 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.25.2
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
StartedAt: 2025-10-20 00:34:08 -0400 (Mon, 20 Oct 2025)
EndedAt: 2025-10-20 00:35:37 -0400 (Mon, 20 Oct 2025)
EllapsedTime: 89.1 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.25.2’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-827.048
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.608
ELB improved by 254.44

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.999
ELB improved by 65.6087

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.233
ELB improved by 49.7664

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.128
ELB improved by 24.1043

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.451
ELB improved by 9.67766

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.159
ELB improved by 5.29203

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.405
ELB improved by 3.75395

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.302
ELB improved by 3.10259

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.403
ELB improved by 2.89877

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.474
ELB improved by 2.92947

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.408
ELB improved by 3.06602

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.202
ELB improved by 3.20592

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.966
ELB improved by 3.23581

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.915
ELB improved by 3.05088

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.28
ELB improved by 2.63575

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.172
ELB improved by 2.10805

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.548
ELB improved by 1.62405

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.288
ELB improved by 1.25932

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.28
ELB improved by 1.00813

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.443
ELB improved by 0.837191

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.728
ELB improved by 0.714549

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.11
ELB improved by 0.618213

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.573
ELB improved by 0.537435

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.103
ELB improved by 0.469211

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.69
ELB improved by 0.413392

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.32
ELB improved by 0.369749

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.983
ELB improved by 0.337651

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.665
ELB improved by 0.317299

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.354
ELB improved by 0.31129

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.028
ELB improved by 0.326117

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.655
ELB improved by 0.373407

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.186
ELB improved by 0.468453

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.574
ELB improved by 0.611824

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.844
ELB improved by 0.730138

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.128
ELB improved by 0.716476

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.527
ELB improved by 0.600865

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.04
ELB improved by 0.486929

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.631
ELB improved by 0.408667

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.275
ELB improved by 0.356164

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.956
ELB improved by 0.318662

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.666
ELB improved by 0.289901

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.4
ELB improved by 0.266266

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.155
ELB improved by 0.245642

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.928
ELB improved by 0.226886

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.718
ELB improved by 0.209519

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.525
ELB improved by 0.193518

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.345
ELB improved by 0.179189

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.178
ELB improved by 0.167115

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.02
ELB improved by 0.158207

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.866
ELB improved by 0.153913

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.71
ELB improved by 0.156663

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.539
ELB improved by 0.170371

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.34
ELB improved by 0.199112

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.103
ELB improved by 0.237329

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.85
ELB improved by 0.252768

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.632
ELB improved by 0.2177

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.464
ELB improved by 0.168121

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.328
ELB improved by 0.135831

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.214
ELB improved by 0.114028

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.118
ELB improved by 0.0958147

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.038
ELB improved by 0.0803302

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.97
ELB improved by 0.0676882

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.913
ELB improved by 0.0576737

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.863
ELB improved by 0.0499396

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.819
ELB improved by 0.0441718

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.779
ELB improved by 0.0401162

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.741
ELB improved by 0.0375631

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.705
ELB improved by 0.0363021

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.669
ELB improved by 0.0360329

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.632
ELB improved by 0.0362308

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.596
ELB improved by 0.0360447

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.562
ELB improved by 0.0344368

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.531
ELB improved by 0.0307277

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.506
ELB improved by 0.0252202

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.487
ELB improved by 0.0191353

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.473
ELB improved by 0.013765

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.463
ELB improved by 0.00974646

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.011
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.654
ELB improved by 325.357

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.124
ELB improved by 60.53

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.445
ELB improved by 32.6782

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.613
ELB improved by 13.8328

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.799
ELB improved by 6.81398

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.221
ELB improved by 4.57802

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.54
ELB improved by 3.68063

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.229
ELB improved by 3.31101

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.114
ELB improved by 3.11455

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.166
ELB improved by 2.94834

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.408
ELB improved by 2.75784

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.898
ELB improved by 2.51045

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.705
ELB improved by 2.193

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.882
ELB improved by 1.82304

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.441
ELB improved by 1.44037

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.353
ELB improved by 1.08811

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.555
ELB improved by 0.797999

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.974
ELB improved by 0.581281

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.544
ELB improved by 0.430214

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.215
ELB improved by 0.328294

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.956
ELB improved by 0.259452

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.744
ELB improved by 0.211755

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.567
ELB improved by 0.177429

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.415
ELB improved by 0.151699

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.283
ELB improved by 0.13168

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.168
ELB improved by 0.115612

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.102396

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.974
ELB improved by 0.0913165

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.892
ELB improved by 0.0818927

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.818
ELB improved by 0.0737861

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.752
ELB improved by 0.06675

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.691
ELB improved by 0.0605988

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.636
ELB improved by 0.0551891

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.585
ELB improved by 0.0504071

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.539
ELB improved by 0.0461612

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.497
ELB improved by 0.0423764

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.458
ELB improved by 0.0389907

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.422
ELB improved by 0.0359524

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.389
ELB improved by 0.0332177

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.358
ELB improved by 0.0307496

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.329
ELB improved by 0.0285164

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.303
ELB improved by 0.0264911

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.278
ELB improved by 0.0246502

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.255
ELB improved by 0.0229735

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.234
ELB improved by 0.0214434

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.214
ELB improved by 0.0200444

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.195
ELB improved by 0.0187632

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.178
ELB improved by 0.0175878

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.161
ELB improved by 0.0165079

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.146
ELB improved by 0.0155143

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.131
ELB improved by 0.0145986

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.117
ELB improved by 0.0137537

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.104
ELB improved by 0.0129731

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.092
ELB improved by 0.0122509

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.08
ELB improved by 0.011582

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.069
ELB improved by 0.0109618

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.059
ELB improved by 0.010386

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.049
ELB improved by 0.00985083

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.198
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-622.682
ELB improved by 245.516

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.058
ELB improved by 57.6245

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.23
ELB improved by 49.8281

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.312
ELB improved by 31.9177

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.112
ELB improved by 15.1998

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.588
ELB improved by 7.52415

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.05
ELB improved by 5.53788

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.963
ELB improved by 5.0872

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.246
ELB improved by 4.71689

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.256
ELB improved by 3.99029

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.235
ELB improved by 3.02032

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.129
ELB improved by 2.1061

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.725
ELB improved by 1.40436

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.783
ELB improved by 0.942212

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.112
ELB improved by 0.670878

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.597
ELB improved by 0.515327

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.175
ELB improved by 0.421543

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.815
ELB improved by 0.360312

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.498
ELB improved by 0.317139

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.213
ELB improved by 0.284869

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.953
ELB improved by 0.259857

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.713
ELB improved by 0.240089

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.488
ELB improved by 0.224273

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.277
ELB improved by 0.211462

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.076
ELB improved by 0.200906

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.884
ELB improved by 0.192009

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.7
ELB improved by 0.184297

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.522
ELB improved by 0.177401

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.351
ELB improved by 0.171045

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.186
ELB improved by 0.165034

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.027
ELB improved by 0.15925

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.873
ELB improved by 0.153654

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.725
ELB improved by 0.14828

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.582
ELB improved by 0.143236

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.443
ELB improved by 0.138703

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.308
ELB improved by 0.134946

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.176
ELB improved by 0.132319

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.045
ELB improved by 0.131273

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.912
ELB improved by 0.132336

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.776
ELB improved by 0.135973

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.634
ELB improved by 0.142219

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.484
ELB improved by 0.150043

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.327
ELB improved by 0.15705

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.166
ELB improved by 0.160574

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.007
ELB improved by 0.159815

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.85
ELB improved by 0.156269

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.698
ELB improved by 0.151951

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.55
ELB improved by 0.148022

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.406
ELB improved by 0.14484

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.263
ELB improved by 0.142416

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.122
ELB improved by 0.140697

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.983
ELB improved by 0.139662

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.843
ELB improved by 0.139392

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.703
ELB improved by 0.140156

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.561
ELB improved by 0.142561

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.413
ELB improved by 0.147799

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.255
ELB improved by 0.157934

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.079
ELB improved by 0.175936

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.874
ELB improved by 0.204783

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.627
ELB improved by 0.247507

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.309
ELB improved by 0.317946

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.859
ELB improved by 0.449535

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.269
ELB improved by 0.589849

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.694
ELB improved by 0.575427

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.187
ELB improved by 0.506537

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.689
ELB improved by 0.498159

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.194
ELB improved by 0.495678

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.765
ELB improved by 0.428408

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.332288

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.173
ELB improved by 0.259673

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.959
ELB improved by 0.214521

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.774
ELB improved by 0.184399

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.614
ELB improved by 0.16009

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.477
ELB improved by 0.137655

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 0.115861

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.266
ELB improved by 0.0947636

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.191
ELB improved by 0.0753589

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.132
ELB improved by 0.0587509

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.086
ELB improved by 0.0453931

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.051
ELB improved by 0.0350782

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.024
ELB improved by 0.0272858

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.003
ELB improved by 0.0214527

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.985
ELB improved by 0.0170913

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.972
ELB improved by 0.0138193

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.96
ELB improved by 0.0113498

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.951
ELB improved by 0.00947301

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.642
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.067
ELB improved by 302.575

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.573
ELB improved by 57.4937

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.387
ELB improved by 34.1862

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.664
ELB improved by 14.7224

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.17
ELB improved by 6.49432

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.348
ELB improved by 3.82236

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.344
ELB improved by 3.00358

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.668
ELB improved by 2.67562

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.192
ELB improved by 2.47622

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.909
ELB improved by 2.28334

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.856
ELB improved by 2.05324

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.077
ELB improved by 1.7785

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.604
ELB improved by 1.47344

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.436
ELB improved by 1.16771

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.541
ELB improved by 0.894838

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.866
ELB improved by 0.675535

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.354
ELB improved by 0.511948

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.959
ELB improved by 0.39482

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.647
ELB improved by 0.31213

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.393
ELB improved by 0.253546

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.182
ELB improved by 0.211464

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.001
ELB improved by 0.180605

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.844
ELB improved by 0.157395

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.704
ELB improved by 0.139458

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.579
ELB improved by 0.125237

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.465
ELB improved by 0.113717

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.361
ELB improved by 0.10423

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.265
ELB improved by 0.0963278

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.175
ELB improved by 0.0896973

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.091
ELB improved by 0.0841145

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.011
ELB improved by 0.0794123

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.936
ELB improved by 0.0754629

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.864
ELB improved by 0.0721661

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.794
ELB improved by 0.0694419

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.727
ELB improved by 0.0672256

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.662
ELB improved by 0.0654643

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.598
ELB improved by 0.0641142

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.534
ELB improved by 0.063139

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.472
ELB improved by 0.0625081

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.41
ELB improved by 0.0621957

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.348
ELB improved by 0.0621798

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.285
ELB improved by 0.0624415

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.222
ELB improved by 0.0629642

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.158
ELB improved by 0.0637336

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.094
ELB improved by 0.064737

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.028
ELB improved by 0.0659629

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.96
ELB improved by 0.0674014

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.891
ELB improved by 0.0690439

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.82
ELB improved by 0.070883

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.747
ELB improved by 0.0729129

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.672
ELB improved by 0.0751291

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.595
ELB improved by 0.0775291

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.515
ELB improved by 0.0801121

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.432
ELB improved by 0.0828789

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.346
ELB improved by 0.0858321

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.257
ELB improved by 0.0889755

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.165
ELB improved by 0.0923134

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.069
ELB improved by 0.0958501

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.969
ELB improved by 0.0995886

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.866
ELB improved by 0.103529

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.758
ELB improved by 0.10767

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.646
ELB improved by 0.112001

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.53
ELB improved by 0.116511

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.408
ELB improved by 0.121182

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.282
ELB improved by 0.125992

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.151
ELB improved by 0.130925

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.015
ELB improved by 0.135972

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.874
ELB improved by 0.141153

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.728
ELB improved by 0.146537

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.576
ELB improved by 0.15228

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.417
ELB improved by 0.15867

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.251
ELB improved by 0.166191

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.075
ELB improved by 0.175549

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.887
ELB improved by 0.187601

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.685
ELB improved by 0.20295

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.464
ELB improved by 0.22101

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.225
ELB improved by 0.238817

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.974
ELB improved by 0.251131

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.72
ELB improved by 0.253246

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.476
ELB improved by 0.244253

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.249
ELB improved by 0.22694

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.044
ELB improved by 0.205236

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.862
ELB improved by 0.182388

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.701
ELB improved by 0.160525

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.56
ELB improved by 0.140818

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.436
ELB improved by 0.123789

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.327
ELB improved by 0.109599

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.229
ELB improved by 0.098263

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.139
ELB improved by 0.0897921

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.054
ELB improved by 0.0842739

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.973
ELB improved by 0.0819075

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.89
ELB improved by 0.0829598

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.802
ELB improved by 0.0875707

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.707
ELB improved by 0.0953602

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.602
ELB improved by 0.105119

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.486
ELB improved by 0.115616

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.357
ELB improved by 0.128741

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.204
ELB improved by 0.153679

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422
ELB improved by 0.203875

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.73
ELB improved by 0.269418

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.433
ELB improved by 0.297427

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.167
ELB improved by 0.265407

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.964
ELB improved by 0.202968

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.819
ELB improved by 0.145318

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.706
ELB improved by 0.112736

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.602
ELB improved by 0.103898

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.494
ELB improved by 0.108629

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.377
ELB improved by 0.116487

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.254
ELB improved by 0.123608

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.114
ELB improved by 0.139298

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.933
ELB improved by 0.181008

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.678
ELB improved by 0.255889

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.346
ELB improved by 0.332021

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.972
ELB improved by 0.373026

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.549
ELB improved by 0.423473

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.035
ELB improved by 0.513952

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.528
ELB improved by 0.506691

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.174
ELB improved by 0.354414

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.967
ELB improved by 0.207159

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.849
ELB improved by 0.117856

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.779
ELB improved by 0.0697779

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.735
ELB improved by 0.0439869

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.705
ELB improved by 0.0297673

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.684
ELB improved by 0.0216303

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.667
ELB improved by 0.016773

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.653
ELB improved by 0.0137471

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.641
ELB improved by 0.0117893

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.631
ELB improved by 0.0104871

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.621
ELB improved by 0.00960995

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.116   0.185   2.289 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0500.0040.054
getPIPs0.0500.0090.059
graper0.0790.0080.087
makeExampleData0.0090.0010.011
makeExampleDataWithUnequalGroups0.0110.0020.013
plotELBO0.3130.0370.351
plotGroupPenalties1.0790.0411.120
plotPosterior0.6410.0120.652
predict.graper2.0670.0142.082
print.graper0.0460.0060.051