Britta Velten
| Snapshot Date: 2025-10-19 13:45 -0400 (Sun, 19 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-20 12:03 -0400 (Mon, 20 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4887 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4677 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4622 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4632 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 918/2353 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-10-20 00:34:08 -0400 (Mon, 20 Oct 2025) |
| EndedAt: 2025-10-20 00:35:37 -0400 (Mon, 20 Oct 2025) |
| EllapsedTime: 89.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-827.048
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.608
ELB improved by 254.44
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.999
ELB improved by 65.6087
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.233
ELB improved by 49.7664
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.128
ELB improved by 24.1043
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.451
ELB improved by 9.67766
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.159
ELB improved by 5.29203
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.405
ELB improved by 3.75395
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.302
ELB improved by 3.10259
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.403
ELB improved by 2.89877
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.474
ELB improved by 2.92947
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.408
ELB improved by 3.06602
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.202
ELB improved by 3.20592
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.966
ELB improved by 3.23581
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.915
ELB improved by 3.05088
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.28
ELB improved by 2.63575
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.172
ELB improved by 2.10805
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.548
ELB improved by 1.62405
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.288
ELB improved by 1.25932
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.28
ELB improved by 1.00813
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.443
ELB improved by 0.837191
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.728
ELB improved by 0.714549
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.11
ELB improved by 0.618213
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.573
ELB improved by 0.537435
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.103
ELB improved by 0.469211
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.69
ELB improved by 0.413392
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.32
ELB improved by 0.369749
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.983
ELB improved by 0.337651
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.665
ELB improved by 0.317299
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.354
ELB improved by 0.31129
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.028
ELB improved by 0.326117
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.655
ELB improved by 0.373407
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.186
ELB improved by 0.468453
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.574
ELB improved by 0.611824
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.844
ELB improved by 0.730138
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.128
ELB improved by 0.716476
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.527
ELB improved by 0.600865
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.04
ELB improved by 0.486929
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.631
ELB improved by 0.408667
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.275
ELB improved by 0.356164
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.956
ELB improved by 0.318662
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.666
ELB improved by 0.289901
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.4
ELB improved by 0.266266
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.155
ELB improved by 0.245642
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.928
ELB improved by 0.226886
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.718
ELB improved by 0.209519
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.525
ELB improved by 0.193518
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.345
ELB improved by 0.179189
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.178
ELB improved by 0.167115
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.02
ELB improved by 0.158207
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.866
ELB improved by 0.153913
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.71
ELB improved by 0.156663
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.539
ELB improved by 0.170371
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.34
ELB improved by 0.199112
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.103
ELB improved by 0.237329
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.85
ELB improved by 0.252768
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.632
ELB improved by 0.2177
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.464
ELB improved by 0.168121
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.328
ELB improved by 0.135831
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.214
ELB improved by 0.114028
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.118
ELB improved by 0.0958147
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.038
ELB improved by 0.0803302
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.97
ELB improved by 0.0676882
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.913
ELB improved by 0.0576737
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.863
ELB improved by 0.0499396
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.819
ELB improved by 0.0441718
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.779
ELB improved by 0.0401162
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.741
ELB improved by 0.0375631
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.705
ELB improved by 0.0363021
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.669
ELB improved by 0.0360329
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.632
ELB improved by 0.0362308
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.596
ELB improved by 0.0360447
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.562
ELB improved by 0.0344368
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.531
ELB improved by 0.0307277
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.506
ELB improved by 0.0252202
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.487
ELB improved by 0.0191353
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.473
ELB improved by 0.013765
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.463
ELB improved by 0.00974646
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.011
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.654
ELB improved by 325.357
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.124
ELB improved by 60.53
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.445
ELB improved by 32.6782
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.613
ELB improved by 13.8328
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.799
ELB improved by 6.81398
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.221
ELB improved by 4.57802
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.54
ELB improved by 3.68063
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.229
ELB improved by 3.31101
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.114
ELB improved by 3.11455
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.166
ELB improved by 2.94834
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.408
ELB improved by 2.75784
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.898
ELB improved by 2.51045
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.705
ELB improved by 2.193
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.882
ELB improved by 1.82304
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.441
ELB improved by 1.44037
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.353
ELB improved by 1.08811
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.555
ELB improved by 0.797999
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.974
ELB improved by 0.581281
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.544
ELB improved by 0.430214
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.215
ELB improved by 0.328294
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.956
ELB improved by 0.259452
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.744
ELB improved by 0.211755
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.567
ELB improved by 0.177429
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.415
ELB improved by 0.151699
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.283
ELB improved by 0.13168
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.168
ELB improved by 0.115612
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.102396
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.974
ELB improved by 0.0913165
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.892
ELB improved by 0.0818927
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.818
ELB improved by 0.0737861
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.752
ELB improved by 0.06675
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.691
ELB improved by 0.0605988
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.636
ELB improved by 0.0551891
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.585
ELB improved by 0.0504071
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.539
ELB improved by 0.0461612
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.497
ELB improved by 0.0423764
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.458
ELB improved by 0.0389907
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.422
ELB improved by 0.0359524
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.389
ELB improved by 0.0332177
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.358
ELB improved by 0.0307496
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.329
ELB improved by 0.0285164
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.303
ELB improved by 0.0264911
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.278
ELB improved by 0.0246502
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.255
ELB improved by 0.0229735
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.234
ELB improved by 0.0214434
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.214
ELB improved by 0.0200444
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.195
ELB improved by 0.0187632
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.178
ELB improved by 0.0175878
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.161
ELB improved by 0.0165079
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.146
ELB improved by 0.0155143
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.131
ELB improved by 0.0145986
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.117
ELB improved by 0.0137537
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.104
ELB improved by 0.0129731
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.092
ELB improved by 0.0122509
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.08
ELB improved by 0.011582
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.069
ELB improved by 0.0109618
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.059
ELB improved by 0.010386
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.049
ELB improved by 0.00985083
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.198
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-622.682
ELB improved by 245.516
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.058
ELB improved by 57.6245
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.23
ELB improved by 49.8281
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.312
ELB improved by 31.9177
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.112
ELB improved by 15.1998
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.588
ELB improved by 7.52415
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.05
ELB improved by 5.53788
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.963
ELB improved by 5.0872
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.246
ELB improved by 4.71689
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.256
ELB improved by 3.99029
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.235
ELB improved by 3.02032
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.129
ELB improved by 2.1061
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.725
ELB improved by 1.40436
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.783
ELB improved by 0.942212
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.112
ELB improved by 0.670878
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.597
ELB improved by 0.515327
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.175
ELB improved by 0.421543
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.815
ELB improved by 0.360312
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.498
ELB improved by 0.317139
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.213
ELB improved by 0.284869
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.953
ELB improved by 0.259857
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.713
ELB improved by 0.240089
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.488
ELB improved by 0.224273
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.277
ELB improved by 0.211462
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.076
ELB improved by 0.200906
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.884
ELB improved by 0.192009
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.7
ELB improved by 0.184297
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.522
ELB improved by 0.177401
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.351
ELB improved by 0.171045
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.186
ELB improved by 0.165034
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.027
ELB improved by 0.15925
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.873
ELB improved by 0.153654
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.725
ELB improved by 0.14828
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.582
ELB improved by 0.143236
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.443
ELB improved by 0.138703
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.308
ELB improved by 0.134946
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.176
ELB improved by 0.132319
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.045
ELB improved by 0.131273
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.912
ELB improved by 0.132336
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.776
ELB improved by 0.135973
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.634
ELB improved by 0.142219
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.484
ELB improved by 0.150043
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.327
ELB improved by 0.15705
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.166
ELB improved by 0.160574
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.007
ELB improved by 0.159815
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.85
ELB improved by 0.156269
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.698
ELB improved by 0.151951
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.55
ELB improved by 0.148022
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.406
ELB improved by 0.14484
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.263
ELB improved by 0.142416
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.122
ELB improved by 0.140697
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.983
ELB improved by 0.139662
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.843
ELB improved by 0.139392
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.703
ELB improved by 0.140156
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.561
ELB improved by 0.142561
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.413
ELB improved by 0.147799
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.255
ELB improved by 0.157934
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.079
ELB improved by 0.175936
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.874
ELB improved by 0.204783
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.627
ELB improved by 0.247507
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.309
ELB improved by 0.317946
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.859
ELB improved by 0.449535
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.269
ELB improved by 0.589849
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.694
ELB improved by 0.575427
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.187
ELB improved by 0.506537
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.689
ELB improved by 0.498159
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.194
ELB improved by 0.495678
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.765
ELB improved by 0.428408
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.332288
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.173
ELB improved by 0.259673
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.959
ELB improved by 0.214521
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.774
ELB improved by 0.184399
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.614
ELB improved by 0.16009
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.477
ELB improved by 0.137655
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 0.115861
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.266
ELB improved by 0.0947636
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.191
ELB improved by 0.0753589
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.132
ELB improved by 0.0587509
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.086
ELB improved by 0.0453931
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.051
ELB improved by 0.0350782
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.024
ELB improved by 0.0272858
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.003
ELB improved by 0.0214527
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.985
ELB improved by 0.0170913
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.972
ELB improved by 0.0138193
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.96
ELB improved by 0.0113498
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.951
ELB improved by 0.00947301
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.642
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.067
ELB improved by 302.575
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.573
ELB improved by 57.4937
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.387
ELB improved by 34.1862
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.664
ELB improved by 14.7224
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.17
ELB improved by 6.49432
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.348
ELB improved by 3.82236
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.344
ELB improved by 3.00358
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.668
ELB improved by 2.67562
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.192
ELB improved by 2.47622
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.909
ELB improved by 2.28334
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.856
ELB improved by 2.05324
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.077
ELB improved by 1.7785
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.604
ELB improved by 1.47344
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.436
ELB improved by 1.16771
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.541
ELB improved by 0.894838
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.866
ELB improved by 0.675535
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.354
ELB improved by 0.511948
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.959
ELB improved by 0.39482
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.647
ELB improved by 0.31213
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.393
ELB improved by 0.253546
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.182
ELB improved by 0.211464
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.001
ELB improved by 0.180605
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.844
ELB improved by 0.157395
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.704
ELB improved by 0.139458
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.579
ELB improved by 0.125237
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.465
ELB improved by 0.113717
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.361
ELB improved by 0.10423
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.265
ELB improved by 0.0963278
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.175
ELB improved by 0.0896973
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.091
ELB improved by 0.0841145
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.011
ELB improved by 0.0794123
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.936
ELB improved by 0.0754629
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.864
ELB improved by 0.0721661
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.794
ELB improved by 0.0694419
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.727
ELB improved by 0.0672256
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.662
ELB improved by 0.0654643
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.598
ELB improved by 0.0641142
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.534
ELB improved by 0.063139
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.472
ELB improved by 0.0625081
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.41
ELB improved by 0.0621957
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.348
ELB improved by 0.0621798
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.285
ELB improved by 0.0624415
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.222
ELB improved by 0.0629642
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.158
ELB improved by 0.0637336
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.094
ELB improved by 0.064737
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.028
ELB improved by 0.0659629
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.96
ELB improved by 0.0674014
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.891
ELB improved by 0.0690439
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.82
ELB improved by 0.070883
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.747
ELB improved by 0.0729129
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.672
ELB improved by 0.0751291
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.595
ELB improved by 0.0775291
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.515
ELB improved by 0.0801121
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.432
ELB improved by 0.0828789
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.346
ELB improved by 0.0858321
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.257
ELB improved by 0.0889755
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.165
ELB improved by 0.0923134
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.069
ELB improved by 0.0958501
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.969
ELB improved by 0.0995886
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.866
ELB improved by 0.103529
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.758
ELB improved by 0.10767
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.646
ELB improved by 0.112001
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.53
ELB improved by 0.116511
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.408
ELB improved by 0.121182
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.282
ELB improved by 0.125992
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.151
ELB improved by 0.130925
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.015
ELB improved by 0.135972
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.874
ELB improved by 0.141153
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.728
ELB improved by 0.146537
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.576
ELB improved by 0.15228
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.417
ELB improved by 0.15867
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.251
ELB improved by 0.166191
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.075
ELB improved by 0.175549
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.887
ELB improved by 0.187601
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.685
ELB improved by 0.20295
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.464
ELB improved by 0.22101
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.225
ELB improved by 0.238817
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.974
ELB improved by 0.251131
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.72
ELB improved by 0.253246
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.476
ELB improved by 0.244253
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.249
ELB improved by 0.22694
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.044
ELB improved by 0.205236
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.862
ELB improved by 0.182388
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.701
ELB improved by 0.160525
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.56
ELB improved by 0.140818
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.436
ELB improved by 0.123789
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.327
ELB improved by 0.109599
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.229
ELB improved by 0.098263
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.139
ELB improved by 0.0897921
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.054
ELB improved by 0.0842739
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.973
ELB improved by 0.0819075
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.89
ELB improved by 0.0829598
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.802
ELB improved by 0.0875707
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.707
ELB improved by 0.0953602
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.602
ELB improved by 0.105119
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.486
ELB improved by 0.115616
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.357
ELB improved by 0.128741
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.204
ELB improved by 0.153679
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422
ELB improved by 0.203875
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.73
ELB improved by 0.269418
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.433
ELB improved by 0.297427
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.167
ELB improved by 0.265407
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.964
ELB improved by 0.202968
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.819
ELB improved by 0.145318
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.706
ELB improved by 0.112736
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.602
ELB improved by 0.103898
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.494
ELB improved by 0.108629
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.377
ELB improved by 0.116487
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.254
ELB improved by 0.123608
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.114
ELB improved by 0.139298
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.933
ELB improved by 0.181008
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.678
ELB improved by 0.255889
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.346
ELB improved by 0.332021
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.972
ELB improved by 0.373026
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.549
ELB improved by 0.423473
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.035
ELB improved by 0.513952
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.528
ELB improved by 0.506691
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.174
ELB improved by 0.354414
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.967
ELB improved by 0.207159
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.849
ELB improved by 0.117856
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.779
ELB improved by 0.0697779
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.735
ELB improved by 0.0439869
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.705
ELB improved by 0.0297673
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.684
ELB improved by 0.0216303
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.667
ELB improved by 0.016773
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.653
ELB improved by 0.0137471
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.641
ELB improved by 0.0117893
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.631
ELB improved by 0.0104871
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.621
ELB improved by 0.00960995
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.116 0.185 2.289
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.050 | 0.004 | 0.054 | |
| getPIPs | 0.050 | 0.009 | 0.059 | |
| graper | 0.079 | 0.008 | 0.087 | |
| makeExampleData | 0.009 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
| plotELBO | 0.313 | 0.037 | 0.351 | |
| plotGroupPenalties | 1.079 | 0.041 | 1.120 | |
| plotPosterior | 0.641 | 0.012 | 0.652 | |
| predict.graper | 2.067 | 0.014 | 2.082 | |
| print.graper | 0.046 | 0.006 | 0.051 | |