Markus List
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/SPONGE |
| git_branch: master |
| git_last_commit: 2b7ca98 |
| git_last_commit_date: 2021-10-26 12:37:30 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:46 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the SPONGE package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SPONGE.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1874/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SPONGE 1.17.0 (landing page) Markus List
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: SPONGE |
| Version: 1.17.0 |
| Command: rm -rf SPONGE.buildbin-libdir && mkdir SPONGE.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=SPONGE.buildbin-libdir SPONGE_1.17.0.tar.gz |
| StartedAt: 2022-03-17 21:42:20 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:43:40 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 79.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: SPONGE_1.17.0.zip |
| PackageFileSize: 8.348 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf SPONGE.buildbin-libdir && mkdir SPONGE.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=SPONGE.buildbin-libdir SPONGE_1.17.0.tar.gz
###
##############################################################################
##############################################################################
* installing *source* package 'SPONGE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SPONGE'
finding HTML links ... done
ceRNA_interactions html
check_and_convert_expression_data html
fn_elasticnet html
fn_gene_miRNA_F_test html
fn_get_model_coef html
fn_get_rss html
fn_get_shared_miRNAs html
gene_expr html
genes_pairwise_combinations html
mir_expr html
mir_interactions html
mircode_ensg html
mircode_symbol html
precomputed_cov_matrices html
precomputed_null_model html
sample_zero_mscor_cov html
sample_zero_mscor_data html
sponge html
sponge_build_null_model html
sponge_compute_p_values html
sponge_edge_centralities html
sponge_gene_miRNA_interaction_filter html
sponge_network html
sponge_node_centralities html
sponge_plot_network html
sponge_plot_network_centralities html
sponge_plot_simulation_results html
sponge_run_benchmark html
sponge_subsampling html
targetscan_ensg html
targetscan_symbol html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'SPONGE' as SPONGE_1.17.0.zip
* DONE (SPONGE)