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INSTALL report for LowMACA on tokay1

This page was generated on 2021-05-06 12:32:00 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the LowMACA package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 972/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LowMACA 1.20.0  (landing page)
Stefano de Pretis , Giorgio Melloni
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/LowMACA
Branch: RELEASE_3_12
Last Commit: 37c0c2e
Last Changed Date: 2020-10-27 11:03:55 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: LowMACA
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/LowMACA_1.20.0.tar.gz && rm -rf LowMACA.buildbin-libdir && mkdir LowMACA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LowMACA.buildbin-libdir LowMACA_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL LowMACA_1.20.0.zip && rm LowMACA_1.20.0.tar.gz LowMACA_1.20.0.zip
StartedAt: 2021-05-05 17:29:06 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:30:20 -0400 (Wed, 05 May 2021)
EllapsedTime: 74.0 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/LowMACA_1.20.0.tar.gz && rm -rf LowMACA.buildbin-libdir && mkdir LowMACA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LowMACA.buildbin-libdir LowMACA_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL LowMACA_1.20.0.zip && rm LowMACA_1.20.0.tar.gz LowMACA_1.20.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  109k  100  109k    0     0  6199k      0 --:--:-- --:--:-- --:--:-- 6453k

install for i386

* installing *source* package 'LowMACA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'LowMACA'
    finding HTML links ... done
    BLOSUM62                                html  
    LowMACA-class                           html  
    LowMACA-package                         html  
    LowMACA_AML                             html  
    alignSequences                          html  
    allPfamAnalysis                         html  
    bpAll                                   html  
    entropy                                 html  
    getMutations                            html  
    lfm                                     html  
    lfmSingleSequence                       html  
    lmAlignment                             html  
    lmEntropy                               html  
    lmMutations                             html  
    lmObj                                   html  
    lmParams                                html  
    lmPlot                                  html  
    lmPlotSingleSequence                    html  
    mapMutations                            html  
    newLowMACA                              html  
    nullProfile                             html  
    parallelize                             html  
    protter                                 html  
    setup                                   html  
    showTumorType                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Checking if clustalo is in the PATH...
Checking clustalo Version...
Checking perl installation...
Checking perl modules XML::Simple and LWP...
** testing if installed package can be loaded from final location
Checking if clustalo is in the PATH...
Checking clustalo Version...
Checking perl installation...
Checking perl modules XML::Simple and LWP...
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'LowMACA' ...
** testing if installed package can be loaded
Checking if clustalo is in the PATH...
Checking clustalo Version...
Checking perl installation...
Checking perl modules XML::Simple and LWP...
* MD5 sums
packaged installation of 'LowMACA' as LowMACA_1.20.0.zip
* DONE (LowMACA)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'LowMACA' successfully unpacked and MD5 sums checked