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BUILD report for LVSmiRNA on tokay2

This page was generated on 2020-10-17 11:56:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE LVSmiRNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 962/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LVSmiRNA 1.38.0
Stefano Calza
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/LVSmiRNA
Branch: RELEASE_3_11
Last Commit: eef33c0
Last Changed Date: 2020-04-27 14:23:14 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK [ ERROR ] skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: LVSmiRNA
Version: 1.38.0
Command: chmod a+r LVSmiRNA -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data LVSmiRNA
StartedAt: 2020-10-16 22:31:10 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 22:31:45 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 34.7 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   chmod a+r LVSmiRNA -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data LVSmiRNA
###
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* checking for file 'LVSmiRNA/DESCRIPTION' ... OK
* preparing 'LVSmiRNA':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'LVSmiRNA.Rnw' using Sweave
Loading required package: splines
No methods found in package 'BiocGenerics' for requests: 'as.vector', 'unlist' when loading 'LVSmiRNA'
Warning: Package 'LVSmiRNA' is deprecated and will be removed from Bioconductor
  version 3.12

Error: processing vignette 'LVSmiRNA.Rnw' failed with diagnostics:
 chunk 5 (label = estVC) 
Error in UseMethod("estVC") : 
  no applicable method for 'estVC' applied to an object of class "c('RGList', 'list', 'LargeDataObject', 'vector')"

--- failed re-building 'LVSmiRNA.Rnw'

SUMMARY: processing the following file failed:
  'LVSmiRNA.Rnw'

Error: Vignette re-building failed.
Execution halted