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BUILD BIN report for GenomicInteractions on tokay2

This page was generated on 2020-10-17 11:56:40 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE GenomicInteractions PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 710/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicInteractions 1.22.0
Liz Ing-Simmons
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/GenomicInteractions
Branch: RELEASE_3_11
Last Commit: c0b8798
Last Changed Date: 2020-04-27 14:43:28 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GenomicInteractions
Version: 1.22.0
Command: rm -rf GenomicInteractions.buildbin-libdir && mkdir GenomicInteractions.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicInteractions.buildbin-libdir GenomicInteractions_1.22.0.tar.gz
StartedAt: 2020-10-17 10:38:10 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 10:40:14 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 124.4 seconds
RetCode: 0
Status:  OK  
PackageFile: GenomicInteractions_1.22.0.zip
PackageFileSize: 3.829 MiB

Command output

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### Running command:
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###   rm -rf GenomicInteractions.buildbin-libdir && mkdir GenomicInteractions.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicInteractions.buildbin-libdir GenomicInteractions_1.22.0.tar.gz
###
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install for i386

* installing *source* package 'GenomicInteractions' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomicInteractions'
    finding HTML links ... done
    GInteractions-subsetByFeatures-methods
                                            html  
    GenomicInteractions-class               html  
    GenomicInteractions-package             html  
    GenomicInteractions                     html  
    InteractionHelpers                      html  
    InteractionTrack-class                  html  
    InteractionTrack                        html  
    annotateInteractions                    html  
    annotateRegions                         html  
    asBED-GInteractions-method              html  
    availableDisplayPars                    html  
    calculateDistances                      html  
    categoriseInteractions                  html  
    countsBetweenAnchors-methods            html  
    dot-importHicLib                        html  
    dot-importHomer                         html  
    dot-processChiapetName                  html  
    dot-readBam                             html  
    dot-readTwoBams                         html  
    dot-validateInput                       html  
    export.bed12                            html  
    export.bedpe                            html  
    export.chiasig                          html  
    export.igraph                           html  
    get_binom_ligation_threshold            html  
    get_self_ligation_threshold             html  
    getters                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpumVF6l/R.INSTALL21805966b58/GenomicInteractions/man/getters.Rd:43: file link 'eSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    hg19.refseq.transcripts                 html  
    hic_example_data                        html  
    makeGenomicInteractionsFromFile         html  
    mm9_refseq_promoters                    html  
    plotAvgViewpoint                        html  
    plotCisTrans                            html  
    plotCounts                              html  
    plotDists                               html  
    plotInteractionAnnotations              html  
    plotSummaryStats                        html  
    plotViewpoint                           html  
    removeDups                              html  
    resetAnnotations                        html  
    sameStrand                              html  
    setters                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpumVF6l/R.INSTALL21805966b58/GenomicInteractions/man/setters.Rd:27: file link 'eSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    sum-GInteractions-method                html  
    summariseByFeaturePairs                 html  
    summariseByFeatures                     html  
    thymus_enh                              html  
    updateObject-GenomicInteractions-method
                                            html  
    viewPoint                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GenomicInteractions' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomicInteractions' as GenomicInteractions_1.22.0.zip
* DONE (GenomicInteractions)