Ludwig Geistlinger
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/CNVRanger |
| Branch: RELEASE_3_11 |
| Last Commit: 2b6d559 |
| Last Changed Date: 2020-06-05 12:12:56 -0400 (Fri, 05 Jun 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:21 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE CNVRanger PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 338/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CNVRanger 1.4.3 Ludwig Geistlinger
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: CNVRanger |
| Version: 1.4.3 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CNVRanger_1.4.3.tar.gz && rm -rf CNVRanger.buildbin-libdir && mkdir CNVRanger.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVRanger.buildbin-libdir CNVRanger_1.4.3.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CNVRanger_1.4.3.zip && rm CNVRanger_1.4.3.tar.gz CNVRanger_1.4.3.zip |
| StartedAt: 2020-10-16 19:01:35 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:02:43 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 68.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CNVRanger_1.4.3.tar.gz && rm -rf CNVRanger.buildbin-libdir && mkdir CNVRanger.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVRanger.buildbin-libdir CNVRanger_1.4.3.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CNVRanger_1.4.3.zip && rm CNVRanger_1.4.3.tar.gz CNVRanger_1.4.3.zip
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install for i386
* installing *source* package 'CNVRanger' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CNVRanger'
finding HTML links ... done
cnvEQTL html
finding level-2 HTML links ... done
cnvGWAS html
cnvOncoPrint html
generateGDS html
importLrrBaf html
plotEQTL html
plotManhattan html
plotRecurrentRegions html
populationRanges html
setupCnvGWAS html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CNVRanger' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVRanger' as CNVRanger_1.4.3.zip
* DONE (CNVRanger)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CNVRanger' successfully unpacked and MD5 sums checked