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INSTALL report for peakPantheR on tokay1

This page was generated on 2020-04-15 12:33:13 -0400 (Wed, 15 Apr 2020).

Package 1243/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
peakPantheR 1.0.0
Arnaud Wolfer
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/peakPantheR
Branch: RELEASE_3_10
Last Commit: e9614bf
Last Changed Date: 2019-10-29 13:12:05 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: peakPantheR
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/peakPantheR_1.0.0.tar.gz && rm -rf peakPantheR.buildbin-libdir && mkdir peakPantheR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=peakPantheR.buildbin-libdir peakPantheR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL peakPantheR_1.0.0.zip && rm peakPantheR_1.0.0.tar.gz peakPantheR_1.0.0.zip
StartedAt: 2020-04-14 19:47:19 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:48:07 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 48.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/peakPantheR_1.0.0.tar.gz && rm -rf peakPantheR.buildbin-libdir && mkdir peakPantheR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=peakPantheR.buildbin-libdir peakPantheR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL peakPantheR_1.0.0.zip && rm peakPantheR_1.0.0.tar.gz peakPantheR_1.0.0.zip
###
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100  450k  100  450k    0     0  2296k      0 --:--:-- --:--:-- --:--:-- 2356k

install for i386

* installing *source* package 'peakPantheR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'peakPantheR'
    finding HTML links ... done
    EICs-peakPantheRAnnotation-method       html  
    FIR-peakPantheRAnnotation-method        html  
    ROI-peakPantheRAnnotation-method        html  
    TIC-peakPantheRAnnotation-method        html  
    acquisitionTime-peakPantheRAnnotation-method
                                            html  
    annotationDiagnosticMultiplot           html  
    annotationDiagnosticPlots-peakPantheRAnnotation-method
                                            html  
    annotationParamsDiagnostic-peakPantheRAnnotation-method
                                            html  
    annotationTable-peakPantheRAnnotation-method
                                            html  
    cpdID-peakPantheRAnnotation-method      html  
    cpdMetadata-peakPantheRAnnotation-method
                                            html  
    cpdName-peakPantheRAnnotation-method    html  
    dataPoints-peakPantheRAnnotation-method
                                            html  
    extractSignalRawData                    html  
    filename-peakPantheRAnnotation-method   html  
    filepath-peakPantheRAnnotation-method   html  
    findTargetFeatures                      html  
    fitCurve                                html  
    generateIonChromatogram                 html  
    getAcquisitionDatemzML                  html  
    getTargetFeatureStatistic               html  
    integrateFIR                            html  
    is.peakPantheR_curveFit                 html  
    isAnnotated-peakPantheRAnnotation-method
                                            html  
    nbCompounds-peakPantheRAnnotation-method
                                            html  
    nbSamples-peakPantheRAnnotation-method
                                            html  
    outputAnnotationDiagnostic-peakPantheRAnnotation-method
                                            html  
    outputAnnotationParamsCSV-peakPantheRAnnotation-method
                                            html  
    outputAnnotationResult-peakPantheRAnnotation-method
                                            html  
    peakFit-peakPantheRAnnotation-method    html  
    peakPantheR                             html  
    peakPantheRAnnotation                   html  
    peakPantheR_ROIStatistics               html  
    peakPantheR_loadAnnotationParamsCSV     html  
    peakPantheR_parallelAnnotation          html  
    peakPantheR_plotEICFit                  html  
    peakPantheR_plotPeakwidth               html  
    peakPantheR_singleFileSearch            html  
    peakTables-peakPantheRAnnotation-method
                                            html  
    plotEICDetectedPeakwidth                html  
    plotHistogram                           html  
    predictCurve                            html  
    resetAnnotation-peakPantheRAnnotation-method
                                            html  
    resetFIR-peakPantheRAnnotation-method   html  
    saveSingleFileMultiEIC                  html  
    skew_erf                                html  
    skewedGaussian_guess                    html  
    skewedGaussian_minpack.lm               html  
    skewedGaussian_minpack.lm_objectiveFun
                                            html  
    spectraMetadata-peakPantheRAnnotation-method
                                            html  
    sub-peakPantheRAnnotation-ANY-ANY-ANY-method
                                            html  
    uROI-peakPantheRAnnotation-method       html  
    uROIExist-peakPantheRAnnotation-method
                                            html  
    useFIR-peakPantheRAnnotation-method     html  
    useUROI-peakPantheRAnnotation-method    html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'peakPantheR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'peakPantheR' as peakPantheR_1.0.0.zip
* DONE (peakPantheR)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'peakPantheR' successfully unpacked and MD5 sums checked