Back to Multiple platform build/check report for BioC 3.10
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD report for MMUPHin on merida1

This page was generated on 2020-04-15 12:50:23 -0400 (Wed, 15 Apr 2020).

Package 1074/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MMUPHin 1.0.0
Siyuan MA
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/MMUPHin
Branch: RELEASE_3_10
Last Commit: 2a6c283
Last Changed Date: 2019-10-29 13:12:14 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: MMUPHin
Version: 1.0.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MMUPHin
StartedAt: 2020-04-14 23:50:58 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 23:52:00 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 61.8 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MMUPHin
###
##############################################################################
##############################################################################


* checking for file ‘MMUPHin/DESCRIPTION’ ... OK
* preparing ‘MMUPHin’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MMUPHin.Rmd’ using rmarkdown

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Quitting from lines 369-381 (MMUPHin.Rmd) 
Error: processing vignette 'MMUPHin.Rmd' failed with diagnostics:
At optimal_modularity.c:85 : GLPK is not available, Unimplemented function call
--- failed re-building ‘MMUPHin.Rmd’

SUMMARY: processing the following file failed:
  ‘MMUPHin.Rmd’

Error: Vignette re-building failed.
Execution halted