Build/check report for BioC 3.22 experimental data - BUILD results for CytoMethIC on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4891
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for CytoMethIC on nebbiolo2

To the developers/maintainers of the CytoMethIC package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: CytoMethIC

Version: 1.6.0

Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CytoMethIC

StartedAt: 2026-02-24 11:14:16 -0500 (Tue, 24 Feb 2026)

EndedAt: 2026-02-24 11:15:44 -0500 (Tue, 24 Feb 2026)

EllapsedTime: 87.9 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CytoMethIC
###
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* checking for file ‘CytoMethIC/DESCRIPTION’ ... OK
* preparing ‘CytoMethIC’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘CytoMethIC.Rmd’ using rmarkdown
Could not fetch https://maxcdn.bootstrapcdn.com/font-awesome/4.4.0/css/font-awesome.min.css
HttpExceptionRequest Request {
  host                 = "maxcdn.bootstrapcdn.com"
  port                 = 443
  secure               = True
  requestHeaders       = []
  path                 = "/font-awesome/4.4.0/css/font-awesome.min.css"
  queryString          = ""
  method               = "GET"
  proxy                = Nothing
  rawBody              = False
  redirectCount        = 10
  responseTimeout      = ResponseTimeoutDefault
  requestVersion       = HTTP/1.1
}
 (InternalException (HostCannotConnect "maxcdn.bootstrapcdn.com" [Network.Socket.connect: <socket: 17>: does not exist (Network unreachable),Network.Socket.connect: <socket: 17>: does not exist (Network unreachable),Network.Socket.connect: <socket: 17>: does not exist (Connection refused),Network.Socket.connect: <socket: 17>: does not exist (Connection refused)]))
Error: processing vignette 'CytoMethIC.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building ‘CytoMethIC.Rmd’

--- re-building ‘Oncology.Rmd’ using rmarkdown
Could not fetch https://maxcdn.bootstrapcdn.com/font-awesome/4.4.0/css/font-awesome.min.css
HttpExceptionRequest Request {
  host                 = "maxcdn.bootstrapcdn.com"
  port                 = 443
  secure               = True
  requestHeaders       = []
  path                 = "/font-awesome/4.4.0/css/font-awesome.min.css"
  queryString          = ""
  method               = "GET"
  proxy                = Nothing
  rawBody              = False
  redirectCount        = 10
  responseTimeout      = ResponseTimeoutDefault
  requestVersion       = HTTP/1.1
}
 (InternalException (HostCannotConnect "maxcdn.bootstrapcdn.com" [Network.Socket.connect: <socket: 17>: does not exist (Network unreachable),Network.Socket.connect: <socket: 17>: does not exist (Network unreachable),Network.Socket.connect: <socket: 17>: does not exist (Connection refused),Network.Socket.connect: <socket: 17>: does not exist (Connection refused)]))
Error: processing vignette 'Oncology.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building ‘Oncology.Rmd’

SUMMARY: processing the following files failed:
  ‘CytoMethIC.Rmd’ ‘Oncology.Rmd’

Error: Vignette re-building failed.
Execution halted