Back to Books build report for BioC 3.22

This page was generated on 2025-12-12 14:30 -0500 (Fri, 12 Dec 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4882
merida1macOS 12.7.6 Montereyx86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4673
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 3/11HostnameOS / ArchINSTALLBUILDCHECK
OHCA 1.6.0  (landing page)
Jacques Serizay
Snapshot Date: 2025-12-12 06:30 -0500 (Fri, 12 Dec 2025)
git_url: https://git.bioconductor.org/packages/OHCA
git_branch: RELEASE_3_22
git_last_commit: 66a78a0
git_last_commit_date: 2025-10-29 10:13:09 -0500 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'HiCool' which is not available
merida1macOS 12.7.6 Monterey / x86_64  OK    OK    OK  


BUILD results for OHCA on nebbiolo2

To the developers/maintainers of the OHCA package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OHCA
Version: 1.6.0
Command: /home/biocbuild/bbs-3.22-books/R/bin/R CMD build --keep-empty-dirs --no-resave-data OHCA
StartedAt: 2025-12-12 06:47:20 -0500 (Fri, 12 Dec 2025)
EndedAt: 2025-12-12 07:17:02 -0500 (Fri, 12 Dec 2025)
EllapsedTime: 1781.8 seconds
RetCode: 0
Status:   OK  
PackageFile: OHCA_1.6.0.tar.gz
PackageFileSize: 23.88 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.22-books/R/bin/R CMD build --keep-empty-dirs --no-resave-data OHCA
###
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* checking for file ‘OHCA/DESCRIPTION’ ... OK
* preparing ‘OHCA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
* creating default NAMESPACE file
* building ‘OHCA_1.6.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OHCA/inst/doc/book/site_libs/quarto-html/quarto-syntax-highlighting-c1f63da3e08f13bc72dc17e92cfd001d.css’