| Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2025-10-16 11:41 -0400 (Thu, 16 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4833 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4614 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4555 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4586 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2282/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| variancePartition 1.38.1 (landing page) Gabriel E. Hoffman
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | NA | ||||||||||
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To the developers/maintainers of the variancePartition package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/variancePartition.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: variancePartition |
| Version: 1.38.1 |
| Command: rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh variancePartition_1.38.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R variancePartition.buildbin-libdir |
| StartedAt: 2025-10-15 20:58:23 -0400 (Wed, 15 Oct 2025) |
| EndedAt: 2025-10-15 20:58:45 -0400 (Wed, 15 Oct 2025) |
| EllapsedTime: 22.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: variancePartition_1.38.1.tgz |
| PackageFileSize: 5.107 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh variancePartition_1.38.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R variancePartition.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=variancePartition.buildbin-libdir variancePartition_1.38.1.tar.gz' >>>>>>> * installing *source* package ‘variancePartition’ ... ** this is package ‘variancePartition’ version ‘1.38.1’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘calcVarPart’ with signature ‘"negbin"’: no definition for class “negbin” in method for ‘checkModelStatus’ with signature ‘"negbin"’: no definition for class “negbin” Creating a new generic function for ‘eBayes’ in package ‘variancePartition’ Creating a new generic function for ‘classifyTestsF’ in package ‘variancePartition’ Creating a new generic function for ‘topTable’ in package ‘variancePartition’ ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (variancePartition)