##############################################################################
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###
### Running command:
###
###   chmod a+r pareg -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data pareg
###
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* checking for file 'pareg/DESCRIPTION' ... OK
* preparing 'pareg':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'pareg.Rmd' using rmarkdown
Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: C:\Users\biocbuild\.basilisk\1.20.0\pareg\1.12.0\pareg

  added / updated specs:
    - python=3.12.8


The following NEW packages will be INSTALLED:

  bzip2              anaconda/win-64::bzip2-1.0.8-h2bbff1b_6 
  ca-certificates    anaconda/win-64::ca-certificates-2025.7.15-haa95532_0 
  expat              anaconda/win-64::expat-2.7.1-h8ddb27b_0 
  libffi             anaconda/win-64::libffi-3.4.4-hd77b12b_1 
  openssl            anaconda/win-64::openssl-3.0.17-h35632f6_0 
  pip                anaconda/noarch::pip-25.1-pyhc872135_2 
  python             anaconda/win-64::python-3.12.8-h14ffc60_0 
  setuptools         anaconda/win-64::setuptools-78.1.1-py312haa95532_0 
  sqlite             anaconda/win-64::sqlite-3.50.2-hda9a48d_1 
  tk                 anaconda/win-64::tk-8.6.14-h5e9d12e_1 
  tzdata             anaconda/noarch::tzdata-2025b-h04d1e81_0 
  ucrt               anaconda/win-64::ucrt-10.0.22621.0-haa95532_0 
  vc                 anaconda/win-64::vc-14.3-h2df5915_10 
  vc14_runtime       anaconda/win-64::vc14_runtime-14.44.35208-h4927774_10 
  vs2015_runtime     anaconda/win-64::vs2015_runtime-14.44.35208-ha6b5a95_10 
  wheel              anaconda/win-64::wheel-0.45.1-py312haa95532_0 
  xz                 anaconda/win-64::xz-5.6.4-h4754444_1 
  zlib               anaconda/win-64::zlib-1.2.13-h8cc25b3_1 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

# All requested packages already installed.

Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - package tensorflow-base-2.10.0-gpu_py37h9761872_0 requires python >=3.7,<3.8.0a0, but none of the providers can be installed

Could not solve for environment specs
The following packages are incompatible
\u251c\u2500 python 3.12.8**  is requested and can be installed;
\u2514\u2500 tensorflow 2.10.0**  is not installable because there are no viable options
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py37he3c91d7_0|2.10.0 gpu_py37h9761872_0], which requires
   \u2502     \u2514\u2500 python >=3.7,<3.8.0a0 , which conflicts with any installable versions previously reported;
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py310he3c91d7_0|2.10.0 gpu_py310h9761872_0|2.10.0 mkl_py310h6a7f48e_0], which requires
   \u2502     \u2514\u2500 python >=3.10,<3.11.0a0 , which conflicts with any installable versions previously reported;
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py38he3c91d7_0|2.10.0 gpu_py38h9761872_0|2.10.0 mkl_py38h6a7f48e_0], which requires
   \u2502     \u2514\u2500 python >=3.8,<3.9.0a0 , which conflicts with any installable versions previously reported;
   \u2514\u2500 tensorflow 2.10.0 would require
      \u2514\u2500 tensorflow-base [2.10.0 eigen_py39he3c91d7_0|2.10.0 gpu_py39h9761872_0|2.10.0 mkl_py39h6a7f48e_0], which requires
         \u2514\u2500 python >=3.9,<3.10.0a0 , which conflicts with any installable versions previously reported.


Quitting from pareg.Rmd:144-150 [unnamed-chunk-9]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! one or more Python packages failed to install [error code 1]
---
Backtrace:
    ▆
 1. └─pareg::pareg(...)
 2.   └─basilisk::basiliskStart(...)
 3.     └─basilisk::obtainEnvironmentPath(env)
 4.       └─basilisk::setupBasiliskEnv(...)
 5.         └─reticulate::conda_install(...)
 6.           └─reticulate:::stopf(fmt, result)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'pareg.Rmd' failed with diagnostics:
one or more Python packages failed to install [error code 1]
--- failed re-building 'pareg.Rmd'

--- re-building 'pathway_similarities.Rmd' using rmarkdown
--- finished re-building 'pathway_similarities.Rmd'

SUMMARY: processing the following file failed:
  'pareg.Rmd'

Error: Vignette re-building failed.
Execution halted