Multiple platform build/check report for BioC 3.22 - CHECK results for graper on kjohnson1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4882
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4673
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4607
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4671
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on kjohnson1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.26.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz

StartedAt: 2025-12-17 05:13:23 -0500 (Wed, 17 Dec 2025)

EndedAt: 2025-12-17 05:15:08 -0500 (Wed, 17 Dec 2025)

EllapsedTime: 105.1 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 Patched (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.905
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.424
ELB improved by 295.48

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.429
ELB improved by 55.9955

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.666
ELB improved by 34.7628

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.124
ELB improved by 16.5418

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.674
ELB improved by 8.44959

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.595
ELB improved by 7.07946

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.127
ELB improved by 7.46819

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.086
ELB improved by 8.04036

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.316
ELB improved by 7.77055

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.085
ELB improved by 6.23049

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.8
ELB improved by 4.28563

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.894
ELB improved by 2.90607

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.769
ELB improved by 2.12466

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.087
ELB improved by 1.68153

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.618
ELB improved by 1.46912

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.325
ELB improved by 1.29371

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.288
ELB improved by 1.03675

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.529
ELB improved by 0.758389

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.934
ELB improved by 0.595151

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.398
ELB improved by 0.536409

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.885
ELB improved by 0.512747

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.41
ELB improved by 0.475261

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.981
ELB improved by 0.428846

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.584
ELB improved by 0.396853

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.202
ELB improved by 0.381988

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.824
ELB improved by 0.378088

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.443
ELB improved by 0.380861

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.055
ELB improved by 0.388497

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.654
ELB improved by 0.400666

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.236
ELB improved by 0.418014

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.794
ELB improved by 0.441961

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.32
ELB improved by 0.474561

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.801
ELB improved by 0.518194

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.226
ELB improved by 0.574877

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.582
ELB improved by 0.644911

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.857
ELB improved by 0.724797

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.052
ELB improved by 0.805037

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.182
ELB improved by 0.86949

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.284
ELB improved by 0.898487

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.407
ELB improved by 0.87667

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.605
ELB improved by 0.802432

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.913
ELB improved by 0.691386

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.344
ELB improved by 0.568851

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.888
ELB improved by 0.456613

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.524
ELB improved by 0.36426

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.234
ELB improved by 0.289681

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.008
ELB improved by 0.226007

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.839
ELB improved by 0.169208

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.718
ELB improved by 0.120362

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.636
ELB improved by 0.0819351

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.582
ELB improved by 0.0542262

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.547
ELB improved by 0.0354185

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.524
ELB improved by 0.0230799

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.509
ELB improved by 0.0151088

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.499
ELB improved by 0.00997981

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-863.406
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.468
ELB improved by 278.938

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.516
ELB improved by 61.9519

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.502
ELB improved by 42.0145

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.611
ELB improved by 20.8906

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.03
ELB improved by 9.58105

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.871
ELB improved by 6.15963

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.851
ELB improved by 6.01929

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.33
ELB improved by 6.52165

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.683
ELB improved by 6.6465

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.92
ELB improved by 5.76297

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.726
ELB improved by 4.19453

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.834
ELB improved by 2.89184

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.558
ELB improved by 2.27562

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.321
ELB improved by 2.23752

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.839
ELB improved by 2.48134

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.626
ELB improved by 2.21374

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.197
ELB improved by 1.42812

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.318
ELB improved by 0.878925

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.724
ELB improved by 0.594303

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.287
ELB improved by 0.436882

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.949
ELB improved by 0.338407

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.678
ELB improved by 0.270673

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.457
ELB improved by 0.221184

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.273
ELB improved by 0.183621

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.119
ELB improved by 0.154364

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.988
ELB improved by 0.131134

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.876
ELB improved by 0.112405

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.778
ELB improved by 0.0971116

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.694
ELB improved by 0.0844852

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.62
ELB improved by 0.0739606

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.555
ELB improved by 0.0651134

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.497
ELB improved by 0.0576202

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.446
ELB improved by 0.0512309

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.4
ELB improved by 0.0457499

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.359
ELB improved by 0.0410224

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.322
ELB improved by 0.0369248

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.289
ELB improved by 0.0333572

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.259
ELB improved by 0.0302386

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.231
ELB improved by 0.0275024

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.206
ELB improved by 0.0250937

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.183
ELB improved by 0.0229669

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.162
ELB improved by 0.0210838

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.143
ELB improved by 0.0194122

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.125
ELB improved by 0.0179252

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.108
ELB improved by 0.0165994

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.093
ELB improved by 0.0154154

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.078
ELB improved by 0.0143561

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.065
ELB improved by 0.0134071

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.052
ELB improved by 0.0125557

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.041
ELB improved by 0.0117911

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.029
ELB improved by 0.0111037

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.019
ELB improved by 0.0104854

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.009
ELB improved by 0.00992889

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.668
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-542.172
ELB improved by 311.495

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.753
ELB improved by 54.4195

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.206
ELB improved by 27.5467

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.26
ELB improved by 12.9459

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.526
ELB improved by 7.73455

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.397
ELB improved by 6.12869

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.404
ELB improved by 5.99296

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.239
ELB improved by 6.16501

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.412
ELB improved by 5.82706

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.728
ELB improved by 4.6841

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.444
ELB improved by 3.28412

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.202
ELB improved by 2.24224

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.618
ELB improved by 1.58376

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.474
ELB improved by 1.14338

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.636
ELB improved by 0.838456

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.024
ELB improved by 0.612204

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.569
ELB improved by 0.454468

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.216
ELB improved by 0.352955

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.93
ELB improved by 0.286393

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.69
ELB improved by 0.239869

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.485
ELB improved by 0.205401

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.306
ELB improved by 0.17876

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.148
ELB improved by 0.157531

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.008
ELB improved by 0.14022

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.882
ELB improved by 0.125849

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.769
ELB improved by 0.113751

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.665
ELB improved by 0.10346

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.57
ELB improved by 0.094639

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.483
ELB improved by 0.0870309

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.403
ELB improved by 0.0804339

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.328
ELB improved by 0.0746827

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.259
ELB improved by 0.0696392

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.193
ELB improved by 0.0651872

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.132
ELB improved by 0.0612296

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.075
ELB improved by 0.0576856

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.02
ELB improved by 0.0544886

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.968
ELB improved by 0.0515842

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.92
ELB improved by 0.048928

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.873
ELB improved by 0.0464843

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.829
ELB improved by 0.0442242

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.787
ELB improved by 0.0421245

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.747
ELB improved by 0.0401666

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.708
ELB improved by 0.0383356

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.672
ELB improved by 0.0366195

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.637
ELB improved by 0.0350086

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.603
ELB improved by 0.0334951

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.571
ELB improved by 0.0320725

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.54
ELB improved by 0.0307354

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.511
ELB improved by 0.0294789

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.482
ELB improved by 0.028299

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.455
ELB improved by 0.0271918

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.429
ELB improved by 0.0261539

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.404
ELB improved by 0.0251818

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.38
ELB improved by 0.0242724

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.356
ELB improved by 0.0234223

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.334
ELB improved by 0.0226286

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.312
ELB improved by 0.0218882

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.291
ELB improved by 0.0211981

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.27
ELB improved by 0.0205553

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.25
ELB improved by 0.0199572

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.231
ELB improved by 0.0194009

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.212
ELB improved by 0.0188839

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.193
ELB improved by 0.0184037

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.175
ELB improved by 0.0179578

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.158
ELB improved by 0.0175441

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.141
ELB improved by 0.0171603

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.124
ELB improved by 0.0168046

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.107
ELB improved by 0.0164749

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.091
ELB improved by 0.0161695

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.075
ELB improved by 0.0158867

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.06
ELB improved by 0.0156249

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.044
ELB improved by 0.0153827

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.029
ELB improved by 0.0151587

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.014
ELB improved by 0.0149514

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.999
ELB improved by 0.0147598

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.985
ELB improved by 0.0145826

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.97
ELB improved by 0.0144186

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.956
ELB improved by 0.014267

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.942
ELB improved by 0.0141266

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.928
ELB improved by 0.0139965

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.914
ELB improved by 0.0138758

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.9
ELB improved by 0.0137636

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.887
ELB improved by 0.0136591

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.873
ELB improved by 0.0135615

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.86
ELB improved by 0.0134701

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.846
ELB improved by 0.013384

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.833
ELB improved by 0.0133027

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.82
ELB improved by 0.0132253

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.807
ELB improved by 0.0131513

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.794
ELB improved by 0.01308

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.781
ELB improved by 0.0130108

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.768
ELB improved by 0.0129431

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.755
ELB improved by 0.0128764

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.742
ELB improved by 0.0128101

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.729
ELB improved by 0.0127437

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.717
ELB improved by 0.0126767

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.704
ELB improved by 0.0126086

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.691
ELB improved by 0.0125391

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.679
ELB improved by 0.0124676

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.667
ELB improved by 0.0123939

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.654
ELB improved by 0.0123174

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.642
ELB improved by 0.012238

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.63
ELB improved by 0.0121552

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.618
ELB improved by 0.0120688

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.606
ELB improved by 0.0119785

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.594
ELB improved by 0.011884

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.582
ELB improved by 0.0117852

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.57
ELB improved by 0.0116819

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.559
ELB improved by 0.0115739

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.547
ELB improved by 0.011461

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.536
ELB improved by 0.0113431

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.525
ELB improved by 0.0112202

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.514
ELB improved by 0.0110921

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.503
ELB improved by 0.0109587

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.492
ELB improved by 0.0108201

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.481
ELB improved by 0.0106761

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.471
ELB improved by 0.0105268

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.46
ELB improved by 0.0103722

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.45
ELB improved by 0.0102122

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.44
ELB improved by 0.0100468

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.43
ELB improved by 0.00987623

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.082
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.943
ELB improved by 275.139

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.117
ELB improved by 62.8256

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.055
ELB improved by 45.0618

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.715
ELB improved by 22.34

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.899
ELB improved by 9.81632

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.021
ELB improved by 5.87748

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.038
ELB improved by 4.98311

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.021
ELB improved by 5.01734

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.693
ELB improved by 5.32812

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.233
ELB improved by 5.45965

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.154
ELB improved by 5.07888

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.025
ELB improved by 4.12974

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.083
ELB improved by 2.94186

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.144
ELB improved by 1.93893

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.867
ELB improved by 1.27696

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.984
ELB improved by 0.882691

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.336
ELB improved by 0.647951

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.835
ELB improved by 0.50134

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.431
ELB improved by 0.404034

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.095
ELB improved by 0.335712

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.81
ELB improved by 0.285477

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.562
ELB improved by 0.247172

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.345
ELB improved by 0.21711

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.152
ELB improved by 0.192953

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.979
ELB improved by 0.173147

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.823
ELB improved by 0.156616

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.68
ELB improved by 0.142598

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.55
ELB improved by 0.130534

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.43
ELB improved by 0.120013

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.319
ELB improved by 0.11073

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.216
ELB improved by 0.102452

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.121
ELB improved by 0.0950054

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.033
ELB improved by 0.0882597

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.951
ELB improved by 0.0821144

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.874
ELB improved by 0.0764932

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.803
ELB improved by 0.0713365

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.737
ELB improved by 0.0665971

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.674
ELB improved by 0.0622365

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.616
ELB improved by 0.0582219

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.562
ELB improved by 0.054525

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.51
ELB improved by 0.0511202

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.462
ELB improved by 0.0479841

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.417
ELB improved by 0.0450953

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.375
ELB improved by 0.042434

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.335
ELB improved by 0.0399819

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.297
ELB improved by 0.0377226

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.262
ELB improved by 0.035641

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.228
ELB improved by 0.0337239

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.196
ELB improved by 0.0319593

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.166
ELB improved by 0.0303366

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.137
ELB improved by 0.0288461

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.109
ELB improved by 0.0274791

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.083
ELB improved by 0.0262275

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.058
ELB improved by 0.0250839

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.034
ELB improved by 0.0240411

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.011
ELB improved by 0.0230925

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.989
ELB improved by 0.0222318

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.967
ELB improved by 0.0214531

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.946
ELB improved by 0.020751

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.926
ELB improved by 0.0201202

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.907
ELB improved by 0.0195562

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.888
ELB improved by 0.0190545

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.869
ELB improved by 0.0186115

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.851
ELB improved by 0.0182237

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.833
ELB improved by 0.0178879

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.815
ELB improved by 0.0176014

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.798
ELB improved by 0.0173621

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.781
ELB improved by 0.0171678

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.764
ELB improved by 0.0170168

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.747
ELB improved by 0.0169079

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.73
ELB improved by 0.0168399

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.713
ELB improved by 0.016812

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.696
ELB improved by 0.0168237

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.679
ELB improved by 0.0168748

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.663
ELB improved by 0.0169653

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.645
ELB improved by 0.0170956

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.628
ELB improved by 0.0172662

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.611
ELB improved by 0.0174781

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.593
ELB improved by 0.0177325

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.575
ELB improved by 0.018031

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.557
ELB improved by 0.0183756

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.538
ELB improved by 0.0187687

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.519
ELB improved by 0.0192131

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.499
ELB improved by 0.0197122

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.479
ELB improved by 0.02027

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.458
ELB improved by 0.0208911

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.436
ELB improved by 0.0215808

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.414
ELB improved by 0.0223454

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.391
ELB improved by 0.0231917

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.366
ELB improved by 0.0241276

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.341
ELB improved by 0.0251615

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.315
ELB improved by 0.0263024

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.287
ELB improved by 0.027559

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.258
ELB improved by 0.0289388

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.228
ELB improved by 0.0304463

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.196
ELB improved by 0.0320809

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.162
ELB improved by 0.0338329

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.126
ELB improved by 0.0356803

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.089
ELB improved by 0.0375849

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.049
ELB improved by 0.0394906

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.008
ELB improved by 0.0413271

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.965
ELB improved by 0.0430197

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.921
ELB improved by 0.0445075

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.875
ELB improved by 0.0457668

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.828
ELB improved by 0.046834

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.78
ELB improved by 0.0478254

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.731
ELB improved by 0.048956

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.681
ELB improved by 0.0505708

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.627
ELB improved by 0.0532132

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.57
ELB improved by 0.0577714

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.504
ELB improved by 0.065764

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.424
ELB improved by 0.0798554

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.319
ELB improved by 0.104645

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.172
ELB improved by 0.14744

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.954
ELB improved by 0.21757

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.635
ELB improved by 0.319284

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.206
ELB improved by 0.428638

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.725
ELB improved by 0.481707

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.275
ELB improved by 0.450163

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.896
ELB improved by 0.378116

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.589
ELB improved by 0.306939

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.336
ELB improved by 0.253447

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.117
ELB improved by 0.218511

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.929
ELB improved by 0.188899

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.778
ELB improved by 0.150421

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.671
ELB improved by 0.106717

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.601
ELB improved by 0.0707726

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.554
ELB improved by 0.0470296

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.521
ELB improved by 0.0325667

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.497
ELB improved by 0.0236741

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.479
ELB improved by 0.0179467

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.465
ELB improved by 0.0140635

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.454
ELB improved by 0.0113141

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.445
ELB improved by 0.00930378

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  3.088   0.242   4.861

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.038	0.018	0.144
getPIPs	0.032	0.017	0.074
graper	0.051	0.021	0.098
makeExampleData	0.005	0.001	0.007
makeExampleDataWithUnequalGroups	0.024	0.002	0.026
plotELBO	0.364	0.021	0.582
plotGroupPenalties	1.383	0.047	2.055
plotPosterior	0.698	0.026	0.990
predict.graper	0.417	0.075	0.703
print.graper	0.023	0.010	0.034