Back to Multiple platform build/check report for BioC 3.21:   simplified   long
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This page was generated on 2025-08-04 11:42 -0400 (Mon, 04 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4823
palomino7Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4565
merida1macOS 12.7.5 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4603
kjohnson1macOS 13.6.6 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4544
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4579
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 872/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggsc 1.6.1  (landing page)
Guangchuang Yu
Snapshot Date: 2025-07-31 13:40 -0400 (Thu, 31 Jul 2025)
git_url: https://git.bioconductor.org/packages/ggsc
git_branch: RELEASE_3_21
git_last_commit: e41de82
git_last_commit_date: 2025-07-02 00:07:12 -0400 (Wed, 02 Jul 2025)
nebbiolo1Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


BUILD BIN results for ggsc on palomino7

To the developers/maintainers of the ggsc package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ggsc.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: ggsc
Version: 1.6.1
Command: rm -rf ggsc.buildbin-libdir && mkdir ggsc.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=ggsc.buildbin-libdir ggsc_1.6.1.tar.gz
StartedAt: 2025-08-01 09:39:04 -0400 (Fri, 01 Aug 2025)
EndedAt: 2025-08-01 09:43:14 -0400 (Fri, 01 Aug 2025)
EllapsedTime: 250.3 seconds
RetCode: 0
Status:   OK  
PackageFile: ggsc_1.6.1.zip
PackageFileSize: 757.1 KiB

Command output

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### Running command:
###
###   rm -rf ggsc.buildbin-libdir && mkdir ggsc.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=ggsc.buildbin-libdir ggsc_1.6.1.tar.gz
###
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* installing *source* package 'ggsc' ...
** this is package 'ggsc' version '1.6.1'
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 14.2.0'
g++ -std=gnu++17  -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppArmadillo/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppParallel/include'   -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp -DARMA_64BIT_WORD   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppArmadillo/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppParallel/include'   -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp -DARMA_64BIT_WORD   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c kde.cpp -o kde.o
g++ -std=gnu++17 -shared -s -static-libgcc -o ggsc.dll tmp.def RcppExports.o kde.o -fopenmp -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lRlapack -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lRblas -lgfortran -lquadmath -LE:/biocbuild/bbs-3.21-bioc/R/library/RcppParallel/libs/x64 -lRcppParallel -LE:/biocbuild/bbs-3.21-bioc/R/library/RcppParallel/lib/x64 -ltbb -ltbbmalloc -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR
installing to E:/biocbuild/bbs-3.21-bioc/meat/ggsc.buildbin-libdir/00LOCK-ggsc/00new/ggsc/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ggsc' as ggsc_1.6.1.zip
* DONE (ggsc)