Back to Multiple platform build/check report for BioC 3.21:   simplified   long
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2025-08-04 11:41 -0400 (Mon, 04 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4823
palomino7Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4565
merida1macOS 12.7.5 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4603
kjohnson1macOS 13.6.6 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4544
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4579
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 26/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
affyContam 1.66.0  (landing page)
V. Carey
Snapshot Date: 2025-07-31 13:40 -0400 (Thu, 31 Jul 2025)
git_url: https://git.bioconductor.org/packages/affyContam
git_branch: RELEASE_3_21
git_last_commit: c70ca4b
git_last_commit_date: 2025-04-15 09:43:27 -0400 (Tue, 15 Apr 2025)
nebbiolo1Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


BUILD BIN results for affyContam on palomino7

To the developers/maintainers of the affyContam package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/affyContam.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: affyContam
Version: 1.66.0
Command: rm -rf affyContam.buildbin-libdir && mkdir affyContam.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=affyContam.buildbin-libdir affyContam_1.66.0.tar.gz
StartedAt: 2025-08-01 08:58:16 -0400 (Fri, 01 Aug 2025)
EndedAt: 2025-08-01 08:58:28 -0400 (Fri, 01 Aug 2025)
EllapsedTime: 12.3 seconds
RetCode: 0
Status:   OK  
PackageFile: affyContam_1.66.0.zip
PackageFileSize: 216.2 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf affyContam.buildbin-libdir && mkdir affyContam.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=affyContam.buildbin-libdir affyContam_1.66.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'affyContam' ...
** this is package 'affyContam' version '1.66.0'
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
     Package    LibPath                                Item      
[1,] "affydata" "E:/biocbuild/bbs-3.21-bioc/R/library" "Dilution"
     Title                        
[1,] "AffyBatch instance Dilution"
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
     Package    LibPath                                Item      
[1,] "affydata" "E:/biocbuild/bbs-3.21-bioc/R/library" "Dilution"
     Title                        
[1,] "AffyBatch instance Dilution"
** testing if installed package can be loaded from final location
     Package    LibPath                                Item      
[1,] "affydata" "E:/biocbuild/bbs-3.21-bioc/R/library" "Dilution"
     Title                        
[1,] "AffyBatch instance Dilution"
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'affyContam' as affyContam_1.66.0.zip
* DONE (affyContam)