Multiple platform build/check report for BioC 3.22 - BUILD results for SpatialExperiment on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"	4902
kjohnson3	macOS 13.7.7 Ventura	arm64	4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"	4638
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for SpatialExperiment on nebbiolo2

To the developers/maintainers of the SpatialExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpatialExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: SpatialExperiment

Version: 1.20.0

Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 SpatialExperiment

StartedAt: 2025-11-05 20:22:47 -0500 (Wed, 05 Nov 2025)

EndedAt: 2025-11-05 20:23:49 -0500 (Wed, 05 Nov 2025)

EllapsedTime: 62.0 seconds

RetCode: 0

Status: OK

PackageFile: SpatialExperiment_1.20.0.tar.gz

PackageFileSize: 5.159 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 SpatialExperiment
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* checking for file ‘SpatialExperiment/DESCRIPTION’ ... OK
* preparing ‘SpatialExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 4.1.0)
  WARNING: Added dependency on R >= 4.1.0 because package code uses the
  pipe |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘SpatialImage-utils.R’ ‘Validity.R’ ‘imgData-methods.R’
* adding MD5 file
* building ‘SpatialExperiment_1.20.0.tar.gz’