Multiple platform build/check report for BioC 3.22 - BUILD results for OSTA.data on taishan

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4615
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble"	4610
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4598
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4668
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for OSTA.data on taishan

To the developers/maintainers of the OSTA.data package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OSTA.data.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: OSTA.data

Version: 1.2.0

Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSTA.data

StartedAt: 2025-11-18 03:47:47 -0000 (Tue, 18 Nov 2025)

EndedAt: 2025-11-18 03:48:24 -0000 (Tue, 18 Nov 2025)

EllapsedTime: 37.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSTA.data
###
##############################################################################
##############################################################################


* checking for file ‘OSTA.data/DESCRIPTION’ ... OK
* preparing ‘OSTA.data’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘OSTA.data.Rmd’ using rmarkdown

Quitting from OSTA.data.Rmd:94-96 [xen]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! NotImplemented: Support for codec 'zstd' not built
In order to read this file, you will need to reinstall arrow with additional features enabled.
Set one of these environment variables before installing:

 * Sys.setenv(LIBARROW_MINIMAL = "false") (for all optional features, including 'zstd')
 * Sys.setenv(ARROW_WITH_ZSTD = "ON") (for just 'zstd')

See https://arrow.apache.org/docs/r/articles/install.html for details
---
Backtrace:
    ▆
 1. └─SpatialExperimentIO::readXeniumSXE(td)
 2.   ├─base::as.data.frame(read_parquet(metadata_file))
 3.   └─arrow::read_parquet(metadata_file)
 4.     └─base::tryCatch(reader$ReadTable(), error = read_compressed_error)
 5.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 6.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 7.           └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'OSTA.data.Rmd' failed with diagnostics:
NotImplemented: Support for codec 'zstd' not built
In order to read this file, you will need to reinstall arrow with additional features enabled.
Set one of these environment variables before installing:

 * Sys.setenv(LIBARROW_MINIMAL = "false") (for all optional features, including 'zstd')
 * Sys.setenv(ARROW_WITH_ZSTD = "ON") (for just 'zstd')

See https://arrow.apache.org/docs/r/articles/install.html for details
--- failed re-building ‘OSTA.data.Rmd’

SUMMARY: processing the following file failed:
  ‘OSTA.data.Rmd’

Error: Vignette re-building failed.
Execution halted