| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-08-04 11:40 -0400 (Mon, 04 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4823 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4565 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4603 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4544 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4579 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1361/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.14.0 (landing page) Christian Panse
| nebbiolo1 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.14.0 |
| Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings MsBackendRawFileReader_1.14.0.tar.gz |
| StartedAt: 2025-08-04 00:35:15 -0400 (Mon, 04 Aug 2025) |
| EndedAt: 2025-08-04 00:39:59 -0400 (Mon, 04 Aug 2025) |
| EllapsedTime: 283.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings MsBackendRawFileReader_1.14.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.2 LTS
* using session charset: UTF-8
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.14.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 34.700 7.016 11.934
MsBackendRawFileReader 6.608 2.048 9.173
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** this is package ‘MsBackendRawFileReader’ version ‘1.14.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
>
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [3.7s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠴ | 16 | spectra_subsetting
⠇ | 29 | spectra_subsetting
⠹ | 43 | spectra_subsetting
⠧ | 58 | spectra_subsetting
⠹ | 73 | spectra_subsetting
⠧ | 88 | spectra_subsetting
⠹ | 103 | spectra_subsetting
⠧ | 118 | spectra_subsetting
⠹ | 133 | spectra_subsetting
⠧ | 148 | spectra_subsetting
⠹ | 163 | spectra_subsetting
⠧ | 178 | spectra_subsetting
⠹ | 193 | spectra_subsetting
⠇ | 209 | spectra_subsetting
⠋ | 221 | spectra_subsetting
⠼ | 235 | spectra_subsetting
⠏ | 250 | spectra_subsetting
⠼ | 265 | spectra_subsetting
⠏ | 280 | spectra_subsetting
⠼ | 295 | spectra_subsetting
⠏ | 310 | spectra_subsetting
⠼ | 325 | spectra_subsetting
⠏ | 340 | spectra_subsetting
⠼ | 355 | spectra_subsetting
⠏ | 370 | spectra_subsetting
⠼ | 385 | spectra_subsetting
⠏ | 400 | spectra_subsetting
⠼ | 415 | spectra_subsetting
⠏ | 430 | spectra_subsetting
⠼ | 445 | spectra_subsetting
⠏ | 460 | spectra_subsetting
⠼ | 475 | spectra_subsetting
⠋ | 491 | spectra_subsetting
⠴ | 506 | spectra_subsetting
⠏ | 520 | spectra_subsetting
⠼ | 535 | spectra_subsetting
⠏ | 550 | spectra_subsetting
⠴ | 566 | spectra_subsetting
⠏ | 580 | spectra_subsetting
⠼ | 595 | spectra_subsetting
⠏ | 610 | spectra_subsetting
⠼ | 625 | spectra_subsetting
⠏ | 640 | spectra_subsetting
⠼ | 655 | spectra_subsetting
⠏ | 670 | spectra_subsetting
⠼ | 685 | spectra_subsetting
⠏ | 700 | spectra_subsetting
⠼ | 715 | spectra_subsetting
⠏ | 730 | spectra_subsetting
⠼ | 745 | spectra_subsetting
⠏ | 760 | spectra_subsetting
⠼ | 775 | spectra_subsetting
⠏ | 790 | spectra_subsetting
⠸ | 804 | spectra_subsetting
⠇ | 819 | spectra_subsetting
⠙ | 832 | spectra_subsetting
⠴ | 846 | spectra_subsetting
⠇ | 859 | spectra_subsetting
⠙ | 872 | spectra_subsetting
⠹ | 883 | spectra_subsetting
⠧ | 898 | spectra_subsetting
⠏ | 910 | spectra_subsetting
⠼ | 925 | spectra_subsetting
⠏ | 940 | spectra_subsetting
⠼ | 955 | spectra_subsetting
⠏ | 970 | spectra_subsetting
⠼ | 985 | spectra_subsetting
⠏ | 1000 | spectra_subsetting
⠼ | 1015 | spectra_subsetting
⠏ | 1030 | spectra_subsetting
⠼ | 1045 | spectra_subsetting
⠏ | 1060 | spectra_subsetting
⠼ | 1075 | spectra_subsetting
⠏ | 1090 | spectra_subsetting
⠼ | 1105 | spectra_subsetting
⠏ | 1120 | spectra_subsetting
⠼ | 1135 | spectra_subsetting
⠏ | 1150 | spectra_subsetting
⠼ | 1165 | spectra_subsetting
⠏ | 1180 | spectra_subsetting
⠼ | 1195 | spectra_subsetting
⠏ | 1210 | spectra_subsetting
⠼ | 1225 | spectra_subsetting
⠏ | 1240 | spectra_subsetting
⠼ | 1255 | spectra_subsetting
⠏ | 1270 | spectra_subsetting
⠼ | 1285 | spectra_subsetting
⠏ | 1300 | spectra_subsetting
⠼ | 1315 | spectra_subsetting
⠏ | 1330 | spectra_subsetting
⠼ | 1345 | spectra_subsetting
⠏ | 1360 | spectra_subsetting
⠼ | 1375 | spectra_subsetting
⠏ | 1390 | spectra_subsetting
⠼ | 1405 | spectra_subsetting
⠏ | 1420 | spectra_subsetting
⠴ | 1436 | spectra_subsetting
⠋ | 1451 | spectra_subsetting
⠼ | 1465 | spectra_subsetting
⠏ | 1480 | spectra_subsetting
⠼ | 1495 | spectra_subsetting
⠏ | 1510 | spectra_subsetting
⠸ | 1524 | spectra_subsetting
⠸ | 1534 | spectra_subsetting
⠇ | 1549 | spectra_subsetting
⠋ | 1561 | spectra_subsetting
⠴ | 1576 | spectra_subsetting
⠋ | 1591 | spectra_subsetting
⠴ | 1606 | spectra_subsetting
⠋ | 1621 | spectra_subsetting
⠴ | 1636 | spectra_subsetting
⠙ | 1652 | spectra_subsetting
⠦ | 1667 | spectra_subsetting
⠋ | 1681 | spectra_subsetting
⠴ | 1696 | spectra_subsetting
⠋ | 1711 | spectra_subsetting
⠴ | 1726 | spectra_subsetting
⠧ | 1728 | spectra_subsetting
⠋ | 1731 | spectra_subsetting
⠹ | 1733 | spectra_subsetting
⠴ | 1736 | spectra_subsetting
⠧ | 1738 | spectra_subsetting
⠋ | 1741 | spectra_subsetting
⠹ | 1743 | spectra_subsetting
⠴ | 1746 | spectra_subsetting
⠇ | 1749 | spectra_subsetting
⠋ | 1751 | spectra_subsetting
⠸ | 1754 | spectra_subsetting
⠴ | 1756 | spectra_subsetting
⠇ | 1759 | spectra_subsetting
⠙ | 1762 | spectra_subsetting
⠸ | 1764 | spectra_subsetting
⠦ | 1767 | spectra_subsetting
⠇ | 1769 | spectra_subsetting
⠙ | 1772 | spectra_subsetting
⠼ | 1775 | spectra_subsetting
⠦ | 1777 | spectra_subsetting
⠏ | 1780 | spectra_subsetting
⠙ | 1782 | spectra_subsetting
⠼ | 1785 | spectra_subsetting
⠧ | 1788 | spectra_subsetting
⠏ | 1790 | spectra_subsetting
⠹ | 1793 | spectra_subsetting
⠼ | 1795 | spectra_subsetting
⠧ | 1798 | spectra_subsetting
⠏ | 1800 | spectra_subsetting
⠙ | 1802 | spectra_subsetting
⠸ | 1804 | spectra_subsetting
⠦ | 1807 | spectra_subsetting
⠇ | 1809 | spectra_subsetting
⠋ | 1811 | spectra_subsetting
⠹ | 1813 | spectra_subsetting
⠼ | 1815 | spectra_subsetting
⠦ | 1817 | spectra_subsetting
⠏ | 1820 | spectra_subsetting
⠙ | 1822 | spectra_subsetting
⠼ | 1825 | spectra_subsetting
⠧ | 1828 | spectra_subsetting
⠏ | 1830 | spectra_subsetting
⠹ | 1833 | spectra_subsetting
⠼ | 1835 | spectra_subsetting
⠧ | 1838 | spectra_subsetting
⠋ | 1841 | spectra_subsetting
⠹ | 1843 | spectra_subsetting
⠴ | 1846 | spectra_subsetting
⠧ | 1848 | spectra_subsetting
⠋ | 1851 | spectra_subsetting
⠹ | 1853 | spectra_subsetting
⠴ | 1856 | spectra_subsetting
⠇ | 1859 | spectra_subsetting
⠋ | 1861 | spectra_subsetting
⠸ | 1864 | spectra_subsetting
⠴ | 1866 | spectra_subsetting
⠇ | 1869 | spectra_subsetting
⠙ | 1872 | spectra_subsetting
⠸ | 1874 | spectra_subsetting
⠦ | 1877 | spectra_subsetting
⠇ | 1879 | spectra_subsetting
⠙ | 1882 | spectra_subsetting
⠼ | 1885 | spectra_subsetting
⠦ | 1887 | spectra_subsetting
⠏ | 1890 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠸ | 1894 | spectra_subsetting
⠦ | 1897 | spectra_subsetting
⠏ | 1900 | spectra_subsetting
⠹ | 1903 | spectra_subsetting
⠴ | 1906 | spectra_subsetting
⠇ | 1909 | spectra_subsetting
⠙ | 1912 | spectra_subsetting
⠼ | 1915 | spectra_subsetting
⠧ | 1918 | spectra_subsetting
⠋ | 1921 | spectra_subsetting
⠸ | 1924 | spectra_subsetting
⠦ | 1927 | spectra_subsetting
⠇ | 1929 | spectra_subsetting
⠋ | 1931 | spectra_subsetting
⠸ | 1934 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠇ | 1939 | spectra_subsetting
⠙ | 1942 | spectra_subsetting
⠼ | 1945 | spectra_subsetting
⠧ | 1948 | spectra_subsetting
⠋ | 1951 | spectra_subsetting
⠸ | 1954 | spectra_subsetting
⠦ | 1957 | spectra_subsetting
⠏ | 1960 | spectra_subsetting
⠹ | 1963 | spectra_subsetting
⠴ | 1966 | spectra_subsetting
⠇ | 1969 | spectra_subsetting
⠙ | 1972 | spectra_subsetting
⠼ | 1975 | spectra_subsetting
⠧ | 1978 | spectra_subsetting
⠋ | 1981 | spectra_subsetting
⠸ | 1984 | spectra_subsetting
⠦ | 1987 | spectra_subsetting
⠏ | 1990 | spectra_subsetting
⠹ | 1993 | spectra_subsetting
⠴ | 1996 | spectra_subsetting
⠇ | 1999 | spectra_subsetting
⠙ | 2002 | spectra_subsetting
⠼ | 2005 | spectra_subsetting
⠧ | 2008 | spectra_subsetting
⠋ | 2011 | spectra_subsetting
⠹ | 2013 | spectra_subsetting
⠼ | 2015 | spectra_subsetting
⠧ | 2018 | spectra_subsetting
⠋ | 2021 | spectra_subsetting
⠸ | 2024 | spectra_subsetting
⠦ | 2027 | spectra_subsetting
⠏ | 2030 | spectra_subsetting
⠹ | 2033 | spectra_subsetting
⠴ | 2036 | spectra_subsetting
⠇ | 2039 | spectra_subsetting
⠙ | 2042 | spectra_subsetting
⠼ | 2045 | spectra_subsetting
⠧ | 2048 | spectra_subsetting
⠋ | 2051 | spectra_subsetting
⠸ | 2054 | spectra_subsetting
⠦ | 2057 | spectra_subsetting
⠏ | 2060 | spectra_subsetting
⠹ | 2063 | spectra_subsetting
⠴ | 2066 | spectra_subsetting
⠇ | 2069 | spectra_subsetting
⠙ | 2072 | spectra_subsetting
⠼ | 2075 | spectra_subsetting
⠧ | 2078 | spectra_subsetting
⠋ | 2081 | spectra_subsetting
⠸ | 2084 | spectra_subsetting
⠴ | 2086 | spectra_subsetting
⠇ | 2089 | spectra_subsetting
⠙ | 2092 | spectra_subsetting
⠼ | 2095 | spectra_subsetting
⠧ | 2098 | spectra_subsetting
⠋ | 2101 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠦ | 2107 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠹ | 2113 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠧ | 2118 | spectra_subsetting
⠋ | 2121 | spectra_subsetting
⠸ | 2124 | spectra_subsetting
⠦ | 2127 | spectra_subsetting
⠏ | 2130 | spectra_subsetting
⠹ | 2133 | spectra_subsetting
⠴ | 2136 | spectra_subsetting
⠇ | 2139 | spectra_subsetting
⠙ | 2142 | spectra_subsetting
⠼ | 2145 | spectra_subsetting
⠧ | 2148 | spectra_subsetting
⠋ | 2151 | spectra_subsetting
⠸ | 2154 | spectra_subsetting
⠦ | 2157 | spectra_subsetting
⠇ | 2159 | spectra_subsetting
⠙ | 2162 | spectra_subsetting
⠼ | 2165 | spectra_subsetting
⠧ | 2168 | spectra_subsetting
⠋ | 2171 | spectra_subsetting
⠸ | 2174 | spectra_subsetting
⠦ | 2177 | spectra_subsetting
⠏ | 2180 | spectra_subsetting
⠹ | 2183 | spectra_subsetting
⠴ | 2186 | spectra_subsetting
⠇ | 2189 | spectra_subsetting
⠙ | 2192 | spectra_subsetting
⠼ | 2195 | spectra_subsetting
⠧ | 2198 | spectra_subsetting
⠋ | 2201 | spectra_subsetting
⠸ | 2204 | spectra_subsetting
⠦ | 2207 | spectra_subsetting
⠏ | 2210 | spectra_subsetting
⠹ | 2213 | spectra_subsetting
⠴ | 2216 | spectra_subsetting
⠇ | 2219 | spectra_subsetting
⠙ | 2222 | spectra_subsetting
⠸ | 2224 | spectra_subsetting
⠴ | 2226 | spectra_subsetting
⠇ | 2229 | spectra_subsetting
⠙ | 2232 | spectra_subsetting
⠼ | 2235 | spectra_subsetting
⠧ | 2238 | spectra_subsetting
⠋ | 2241 | spectra_subsetting
⠸ | 2244 | spectra_subsetting
⠦ | 2247 | spectra_subsetting
⠏ | 2250 | spectra_subsetting
⠙ | 2252 | spectra_subsetting
⠼ | 2255 | spectra_subsetting
⠦ | 2257 | spectra_subsetting
⠏ | 2260 | spectra_subsetting
⠹ | 2263 | spectra_subsetting
⠴ | 2266 | spectra_subsetting
⠇ | 2269 | spectra_subsetting
⠋ | 2271 | spectra_subsetting
⠸ | 2274 | spectra_subsetting
⠦ | 2277 | spectra_subsetting
⠏ | 2280 | spectra_subsetting
⠹ | 2283 | spectra_subsetting
⠴ | 2286 | spectra_subsetting
⠇ | 2289 | spectra_subsetting
⠙ | 2292 | spectra_subsetting
⠼ | 2295 | spectra_subsetting
⠧ | 2298 | spectra_subsetting
⠙ | 2302 | spectra_subsetting
⠼ | 2305 | spectra_subsetting
⠹ | 2313 | spectra_subsetting
⠋ | 2321 | spectra_subsetting
⠇ | 2329 | spectra_subsetting
⠸ | 2334 | spectra_subsetting
✔ | 2342 | spectra_subsetting [41.9s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠦ | 27 | spectra_variables
⠇ | 29 | spectra_variables
⠋ | 31 | spectra_variables
⠹ | 43 | spectra_variables
⠹ | 1 62 | spectra_variables
✔ | 1 62 | spectra_variables [14.0s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 59.6 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2408 ]
>
> proc.time()
user system elapsed
81.471 8.055 91.937
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 3.031 | 0.798 | 4.139 | |
| MsBackendRawFileReader | 6.608 | 2.048 | 9.173 | |
| hidden_aliases | 0.070 | 0.026 | 3.043 | |
| ioBenchmark | 34.700 | 7.016 | 11.934 | |