Back to Books build report for BioC 3.23

This page was generated on 2025-11-17 14:30 -0500 (Mon, 17 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4826
lconwaymacOS 12.7.6 Montereyx86_64R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences" 4508
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4562
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 5/11HostnameOS / ArchINSTALLBUILDCHECK
OSCA.advanced 1.19.0  (landing page)
Ludwig Geistlinger
Snapshot Date: 2025-11-17 06:30 -0500 (Mon, 17 Nov 2025)
git_url: https://git.bioconductor.org/packages/OSCA.advanced
git_branch: devel
git_last_commit: fe18653
git_last_commit_date: 2025-10-29 10:13:01 -0500 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'PCAtools' which is not available
lconwaymacOS 12.7.6 Monterey / x86_64  ERROR    ERROR  skipped
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skipped


CHECK results for OSCA.advanced on nebbiolo1

To the developers/maintainers of the OSCA.advanced package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OSCA.advanced
Version: 1.19.0
Command: rm -rf OSCA.advanced.book && mkdir OSCA.advanced.book && /home/biocbuild/BBS/utils/deploy_book.py OSCA.advanced_1.19.0.tar.gz OSCA.advanced.book
StartedAt: 2025-11-17 12:25:16 -0500 (Mon, 17 Nov 2025)
EndedAt: 2025-11-17 12:25:17 -0500 (Mon, 17 Nov 2025)
EllapsedTime: 1.1 seconds
RetCode: 0
Status:   OK  
DeployDestDir: OSCA.advanced.book
Warnings: 0

Command output

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###
### Running command:
###
###   rm -rf OSCA.advanced.book && mkdir OSCA.advanced.book && /home/biocbuild/BBS/utils/deploy_book.py OSCA.advanced_1.19.0.tar.gz OSCA.advanced.book
###
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Deploying content from book tarball 'OSCA.advanced_1.19.0.tar.gz' to 'OSCA.advanced.book/OSCA.advanced/' ... OK