Back to Books build report for BioC 3.22

This page was generated on 2025-07-23 14:30 -0400 (Wed, 23 Jul 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4792
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1/10HostnameOS / ArchINSTALLBUILDCHECK
BiocBookDemo 1.7.0  (landing page)
Jacques Serizay
Snapshot Date: 2025-07-23 06:00 -0400 (Wed, 23 Jul 2025)
git_url: https://git.bioconductor.org/packages/BiocBookDemo
git_branch: devel
git_last_commit: 05bffcd
git_last_commit_date: 2025-04-15 10:47:29 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    NA  

BUILD results for BiocBookDemo on nebbiolo2

To the developers/maintainers of the BiocBookDemo package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: BiocBookDemo
Version: 1.7.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocBookDemo
StartedAt: 2025-07-23 06:17:35 -0400 (Wed, 23 Jul 2025)
EndedAt: 2025-07-23 06:18:39 -0400 (Wed, 23 Jul 2025)
EllapsedTime: 63.3 seconds
RetCode: 0
Status:   OK  
PackageFile: BiocBookDemo_1.7.0.tar.gz
PackageFileSize: 3.307 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocBookDemo
###
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* checking for file ‘BiocBookDemo/DESCRIPTION’ ... OK
* preparing ‘BiocBookDemo’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘BiocBookDemo_1.7.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘BiocBookDemo/inst/doc/book/site_libs/quarto-html/quarto-syntax-highlighting-c1f63da3e08f13bc72dc17e92cfd001d.css’