| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-09 12:08 -0400 (Sat, 09 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4553 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4595 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4537 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2212/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Koen Van den Berge
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
|
To the developers/maintainers of the traviz package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/traviz.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: traviz |
| Version: 1.15.1 |
| Command: chmod a+r traviz -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data traviz |
| StartedAt: 2025-08-08 22:44:22 -0400 (Fri, 08 Aug 2025) |
| EndedAt: 2025-08-08 22:44:32 -0400 (Fri, 08 Aug 2025) |
| EllapsedTime: 10.6 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r traviz -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data traviz
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* checking for file 'traviz/DESCRIPTION' ... OK
* preparing 'traviz':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
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* installing *source* package 'traviz' ...
** this is package 'traviz' version '1.15.1'
** using staged installation
** R
Error in .install_package_code_files(".", instdir) :
files in 'F:/biocbuild/bbs-3.22-bioc/tmpdir/RtmpGKNce6/Rbuild146a46e2242e/traviz/R' missing from 'Collate' field:
zzz.R
ERROR: unable to collate and parse R files for package 'traviz'
* removing 'F:/biocbuild/bbs-3.22-bioc/tmpdir/RtmpGKNce6/Rinst146a442214b4/traviz'
-----------------------------------
ERROR: package installation failed