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This page was generated on 2025-08-09 12:08 -0400 (Sat, 09 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4818
palomino8Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4553
lconwaymacOS 12.7.1 Montereyx86_644.5.1 (2025-06-13) -- "Great Square Root" 4595
kjohnson3macOS 13.7.1 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4537
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1475/2317HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
omXplore 1.3.0  (landing page)
Samuel Wieczorek
Snapshot Date: 2025-08-08 13:45 -0400 (Fri, 08 Aug 2025)
git_url: https://git.bioconductor.org/packages/omXplore
git_branch: devel
git_last_commit: 8318898
git_last_commit_date: 2025-06-10 09:31:05 -0400 (Tue, 10 Jun 2025)
nebbiolo2Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


BUILD BIN results for omXplore on lconway

To the developers/maintainers of the omXplore package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/omXplore.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: omXplore
Version: 1.3.0
Command: rm -rf omXplore.buildbin-libdir && mkdir omXplore.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh omXplore_1.3.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R omXplore.buildbin-libdir
StartedAt: 2025-08-09 01:39:12 -0400 (Sat, 09 Aug 2025)
EndedAt: 2025-08-09 01:40:18 -0400 (Sat, 09 Aug 2025)
EllapsedTime: 66.1 seconds
RetCode: 0
Status:   OK  
PackageFile: omXplore_1.3.0.tgz
PackageFileSize: 1.557 MiB

Command output

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###
### Running command:
###
###   rm -rf omXplore.buildbin-libdir && mkdir omXplore.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh omXplore_1.3.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R omXplore.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=omXplore.buildbin-libdir omXplore_1.3.0.tar.gz'
>>>>>>> 

* installing *source* package ‘omXplore’ ...
** this is package ‘omXplore’ version ‘1.3.0’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘bs4Dash::box’ by ‘graphics::box’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::column’ by ‘shiny::column’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::actionButton’ by ‘shiny::actionButton’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::tabsetPanel’ by ‘shiny::tabsetPanel’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::insertTab’ by ‘shiny::insertTab’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::navbarMenu’ by ‘shiny::navbarMenu’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removePopover’ by ‘shinyBS::removePopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addPopover’ by ‘shinyBS::addPopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addTooltip’ by ‘shinyBS::addTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::createAlert’ by ‘shinyBS::createAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::closeAlert’ by ‘shinyBS::closeAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removeTooltip’ by ‘shinyBS::removeTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::dataTableOutput’ by ‘DT::dataTableOutput’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘omXplore’
Note: possible error in 'boxPlot(dataIn = rv$data, ': unused argument (dataIn = rv$data) 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘bs4Dash::box’ by ‘graphics::box’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::column’ by ‘shiny::column’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::actionButton’ by ‘shiny::actionButton’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::tabsetPanel’ by ‘shiny::tabsetPanel’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::insertTab’ by ‘shiny::insertTab’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::navbarMenu’ by ‘shiny::navbarMenu’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removePopover’ by ‘shinyBS::removePopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addPopover’ by ‘shinyBS::addPopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addTooltip’ by ‘shinyBS::addTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::createAlert’ by ‘shinyBS::createAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::closeAlert’ by ‘shinyBS::closeAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removeTooltip’ by ‘shinyBS::removeTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::dataTableOutput’ by ‘DT::dataTableOutput’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘omXplore’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘bs4Dash::box’ by ‘graphics::box’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::column’ by ‘shiny::column’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::actionButton’ by ‘shiny::actionButton’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::tabsetPanel’ by ‘shiny::tabsetPanel’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::insertTab’ by ‘shiny::insertTab’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::navbarMenu’ by ‘shiny::navbarMenu’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removePopover’ by ‘shinyBS::removePopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addPopover’ by ‘shinyBS::addPopover’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::addTooltip’ by ‘shinyBS::addTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::createAlert’ by ‘shinyBS::createAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::closeAlert’ by ‘shinyBS::closeAlert’ when loading ‘omXplore’
Warning: replacing previous import ‘bs4Dash::removeTooltip’ by ‘shinyBS::removeTooltip’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::dataTableOutput’ by ‘DT::dataTableOutput’ when loading ‘omXplore’
Warning: replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘omXplore’
** testing if installed package keeps a record of temporary installation path
* DONE (omXplore)