| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-06-19 12:06 -0400 (Thu, 19 Jun 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4810 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.0 (2025-04-11 ucrt) -- "How About a Twenty-Six" | 4548 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six" | 4528 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1428/2309 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| netZooR 1.13.4 (landing page) Tara Eicher
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
|
To the developers/maintainers of the netZooR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netZooR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: netZooR |
| Version: 1.13.4 |
| Command: /home/biocbuild/R/R/bin/R CMD INSTALL netZooR |
| StartedAt: 2025-06-16 21:04:13 -0000 (Mon, 16 Jun 2025) |
| EndedAt: 2025-06-16 21:05:44 -0000 (Mon, 16 Jun 2025) |
| EllapsedTime: 91.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/R/R/bin/R CMD INSTALL netZooR
###
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* installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’
* installing *source* package ‘netZooR’ ...
** this is package ‘netZooR’ version ‘1.13.4’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
--2025-06-16 21:04:36-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/skin.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.132.170, 52.219.229.98, 52.219.232.234, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.132.170|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1596768 (1.5M) [binary/octet-stream]
Saving to: ‘skin.rdata’
0K .......... .......... .......... .......... .......... 3% 222K 7s
50K .......... .......... .......... .......... .......... 6% 222K 7s
100K .......... .......... .......... .......... .......... 9% 201M 4s
150K .......... .......... .......... .......... .......... 12% 222K 5s
200K .......... .......... .......... .......... .......... 16% 119M 4s
250K .......... .......... .......... .......... .......... 19% 113M 3s
300K .......... .......... .......... .......... .......... 22% 116M 2s
350K .......... .......... .......... .......... .......... 25% 223K 3s
400K .......... .......... .......... .......... .......... 28% 195M 2s
450K .......... .......... .......... .......... .......... 32% 177M 2s
500K .......... .......... .......... .......... .......... 35% 210M 2s
550K .......... .......... .......... .......... .......... 38% 202M 1s
600K .......... .......... .......... .......... .......... 41% 194M 1s
650K .......... .......... .......... .......... .......... 44% 224M 1s
700K .......... .......... .......... .......... .......... 48% 227M 1s
750K .......... .......... .......... .......... .......... 51% 223K 1s
800K .......... .......... .......... .......... .......... 54% 210M 1s
850K .......... .......... .......... .......... .......... 57% 219M 1s
900K .......... .......... .......... .......... .......... 60% 204M 1s
950K .......... .......... .......... .......... .......... 64% 108M 1s
1000K .......... .......... .......... .......... .......... 67% 205M 1s
1050K .......... .......... .......... .......... .......... 70% 216M 0s
1100K .......... .......... .......... .......... .......... 73% 78.2M 0s
1150K .......... .......... .......... .......... .......... 76% 193M 0s
1200K .......... .......... .......... .......... .......... 80% 195M 0s
1250K .......... .......... .......... .......... .......... 83% 203M 0s
1300K .......... .......... .......... .......... .......... 86% 207M 0s
1350K .......... .......... .......... .......... .......... 89% 199M 0s
1400K .......... .......... .......... .......... .......... 92% 225M 0s
1450K .......... .......... .......... .......... .......... 96% 226M 0s
1500K .......... .......... .......... .......... .......... 99% 227M 0s
1550K ......... 100% 17.4T=1.1s
2025-06-16 21:04:38 (1.35 MB/s) - ‘skin.rdata’ saved [1596768/1596768]
--2025-06-16 21:04:38-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/bladder.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 52.219.99.66, 52.219.94.178, 52.219.142.74, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|52.219.99.66|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1155612 (1.1M) [binary/octet-stream]
Saving to: ‘bladder.rdata’
0K .......... .......... .......... .......... .......... 4% 53.5K 20s
50K .......... .......... .......... .......... .......... 8% 56.6K 19s
100K .......... .......... .......... .......... .......... 13% 75.4K 16s
150K .......... .......... .......... .......... .......... 17% 113K 14s
200K .......... .......... .......... .......... .......... 22% 113K 12s
250K .......... .......... .......... .......... .......... 26% 136K 10s
300K .......... .......... .......... .......... .......... 31% 205K 9s
350K .......... .......... .......... .......... .......... 35% 226K 8s
400K .......... .......... .......... .......... .......... 39% 225K 7s
450K .......... .......... .......... .......... .......... 44% 987K 6s
500K .......... .......... .......... .......... .......... 48% 222K 5s
550K .......... .......... .......... .......... .......... 53% 303K 4s
600K .......... .......... .......... .......... .......... 57% 966K 4s
650K .......... .......... .......... .......... .......... 62% 227K 3s
700K .......... .......... .......... .......... .......... 66% 1.12M 3s
750K .......... .......... .......... .......... .......... 70% 282K 2s
800K .......... .......... .......... .......... .......... 75% 178M 2s
850K .......... .......... .......... .......... .......... 79% 227K 1s
900K .......... .......... .......... .......... .......... 84% 150M 1s
950K .......... .......... .......... .......... .......... 88% 295K 1s
1000K .......... .......... .......... .......... .......... 93% 970K 0s
1050K .......... .......... .......... .......... .......... 97% 212M 0s
1100K .......... .......... ........ 100% 168K=6.0s
2025-06-16 21:04:45 (189 KB/s) - ‘bladder.rdata’ saved [1155612/1155612]
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (netZooR)