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This page was generated on 2025-06-20 12:06 -0400 (Fri, 20 Jun 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4514
palomino8Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4361
lconwaymacOS 12.7.1 Montereyx86_644.5.1 (2025-06-13) -- "Great Square Root" 1031
kjohnson3macOS 13.7.1 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4491
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4496
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1296/2309HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
missMethyl 1.43.0  (landing page)
Belinda Phipson
Snapshot Date: 2025-06-19 13:25 -0400 (Thu, 19 Jun 2025)
git_url: https://git.bioconductor.org/packages/missMethyl
git_branch: devel
git_last_commit: 211f30f
git_last_commit_date: 2025-04-15 10:32:44 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    OK    WARNINGS  

BUILD results for missMethyl on lconway

To the developers/maintainers of the missMethyl package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/missMethyl.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: missMethyl
Version: 1.43.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data missMethyl
StartedAt: 2025-06-19 20:17:49 -0400 (Thu, 19 Jun 2025)
EndedAt: 2025-06-19 20:17:52 -0400 (Thu, 19 Jun 2025)
EllapsedTime: 2.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data missMethyl
###
##############################################################################
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* checking for file ‘missMethyl/DESCRIPTION’ ... OK
* preparing ‘missMethyl’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘IlluminaHumanMethylation450kanno.ilmn12.hg19’, ‘IlluminaHumanMethylationEPICanno.ilm10b4.hg19’, ‘IlluminaHumanMethylationEPICv2anno.20a1.hg38’, ‘BiasedUrn’, ‘IlluminaHumanMethylation450kmanifest’, ‘IlluminaHumanMethylationEPICmanifest’, ‘IlluminaHumanMethylationEPICv2manifest’, ‘limma’, ‘methylumi’, ‘minfi’, ‘ruv’, ‘statmod’ are not available for package ‘missMethyl’
Perhaps try a variation of:
install.packages(c('IlluminaHumanMethylation450kanno.ilmn12.hg19', 'IlluminaHumanMethylationEPICanno.ilm10b4.hg19', 'IlluminaHumanMethylationEPICv2anno.20a1.hg38', 'BiasedUrn', 'IlluminaHumanMethylation450kmanifest', 'IlluminaHumanMethylationEPICmanifest', 'IlluminaHumanMethylationEPICv2manifest', 'limma', 'methylumi', 'minfi', 'ruv', 'statmod'))
* removing ‘/private/tmp/RtmpICEkNr/Rinst1606dd8b99e6/missMethyl’
      -----------------------------------
ERROR: package installation failed