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This page was generated on 2025-05-09 12:09 -0400 (Fri, 09 May 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4749
palomino8Windows Server 2022 Datacenterx644.5.0 (2025-04-11 ucrt) -- "How About a Twenty-Six" 4510
lconwaymacOS 12.7.1 Montereyx86_644.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six" 4548
kjohnson3macOS 13.7.1 Venturaarm644.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six" 4489
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4449
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1027/2304HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
immunotation 1.17.0  (landing page)
Katharina Imkeller
Snapshot Date: 2025-05-08 13:00 -0400 (Thu, 08 May 2025)
git_url: https://git.bioconductor.org/packages/immunotation
git_branch: devel
git_last_commit: 22f5876
git_last_commit_date: 2025-04-15 12:28:55 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    ERROR  
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    OK    ERROR  
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    ERROR  skipped


BUILD BIN results for immunotation on lconway

To the developers/maintainers of the immunotation package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/immunotation.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: immunotation
Version: 1.17.0
Command: rm -rf immunotation.buildbin-libdir && mkdir immunotation.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh immunotation_1.17.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R immunotation.buildbin-libdir
StartedAt: 2025-05-09 00:49:33 -0400 (Fri, 09 May 2025)
EndedAt: 2025-05-09 00:50:02 -0400 (Fri, 09 May 2025)
EllapsedTime: 29.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf immunotation.buildbin-libdir && mkdir immunotation.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh immunotation_1.17.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R immunotation.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=immunotation.buildbin-libdir immunotation_1.17.0.tar.gz'
>>>>>>> 

* installing *source* package ‘immunotation’ ...
** this is package ‘immunotation’ version ‘1.17.0’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: Failed to open 'https://services.healthtech.dtu.dk/services/NetMHCpan-4.1/allele.list': SSL certificate problem: certificate has expired
Warning: Failed to open 'https://services.healthtech.dtu.dk/services/NetMHCpan-4.1/allele.list': SSL certificate problem: certificate has expired
Error in getURL(URL = "https://services.healthtech.dtu.dk/services/NetMHCpan-4.1/allele.list",  : 
  'getURL()' failed:
  URL: https://services.healthtech.dtu.dk/services/NetMHCpan-4.1/allele.list
  error: cannot open the connection
Error: unable to load R code in package ‘immunotation’
Execution halted
ERROR: lazy loading failed for package ‘immunotation’
* removing ‘/Users/biocbuild/bbs-3.22-bioc/meat/immunotation.buildbin-libdir/immunotation’