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This page was generated on 2025-08-09 12:10 -0400 (Sat, 09 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4818
palomino8Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4553
lconwaymacOS 12.7.1 Montereyx86_644.5.1 (2025-06-13) -- "Great Square Root" 4595
kjohnson3macOS 13.7.1 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4537
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1004/2317HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
iCARE 1.37.0  (landing page)
Parichoy Pal Choudhury
Snapshot Date: 2025-08-08 13:45 -0400 (Fri, 08 Aug 2025)
git_url: https://git.bioconductor.org/packages/iCARE
git_branch: devel
git_last_commit: 7159dc5
git_last_commit_date: 2025-04-15 10:57:47 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  ERROR    ERROR  skippedskipped


BUILD results for iCARE on kjohnson3

To the developers/maintainers of the iCARE package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/iCARE.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: iCARE
Version: 1.37.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data iCARE
StartedAt: 2025-08-08 16:40:27 -0400 (Fri, 08 Aug 2025)
EndedAt: 2025-08-08 16:40:28 -0400 (Fri, 08 Aug 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data iCARE
###
##############################################################################
##############################################################################


* checking for file ‘iCARE/DESCRIPTION’ ... OK
* preparing ‘iCARE’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘iCARE’ ...
** this is package ‘iCARE’ version ‘1.37.0’
** using staged installation
** libs
using C compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch arm64 -std=gnu2x -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c source.c -o source.o
source.c:45:21: error: unknown type name 'n'
double * dVec_alloc(n, initFlag, initVal)
                    ^
source.c:45:24: error: unknown type name 'initFlag'
double * dVec_alloc(n, initFlag, initVal)
                       ^
source.c:45:34: error: unknown type name 'initVal'
double * dVec_alloc(n, initFlag, initVal)
                                 ^
source.c:45:42: error: expected ';' after top level declarator
double * dVec_alloc(n, initFlag, initVal)
                                         ^
                                         ;
source.c:48:1: error: expected identifier or '('
{
^
source.c:64:18: error: unknown type name 'n'
int * iVec_alloc(n, initFlag, initVal)
                 ^
source.c:64:21: error: unknown type name 'initFlag'
int * iVec_alloc(n, initFlag, initVal)
                    ^
source.c:64:31: error: unknown type name 'initVal'
int * iVec_alloc(n, initFlag, initVal)
                              ^
source.c:64:39: error: expected ';' after top level declarator
int * iVec_alloc(n, initFlag, initVal)
                                      ^
                                      ;
source.c:65:18: error: redefinition of 'initVal' with a different type: 'int' vs 'double'
int n, initFlag, initVal;
                 ^
source.c:47:8: note: previous definition is here
double initVal;
       ^
source.c:66:1: error: expected identifier or '('
{
^
source.c:81:22: error: unknown type name 'nrow'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
                     ^
source.c:81:28: error: unknown type name 'ncol'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
                           ^
source.c:81:34: error: unknown type name 'initFlag'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
                                 ^
source.c:81:44: error: unknown type name 'initVal'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
                                           ^
source.c:81:52: error: expected ';' after top level declarator
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
                                                   ^
                                                   ;
source.c:84:1: error: expected identifier or '('
{
^
source.c:98:18: error: unknown type name 'x'
void matrix_free(x, n)
                 ^
source.c:98:21: error: unknown type name 'n'
void matrix_free(x, n)
                    ^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
make: *** [source.o] Error 1
ERROR: compilation failed for package ‘iCARE’
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/Rtmpq90R9m/Rinst91e36871d1c/iCARE’
      -----------------------------------
ERROR: package installation failed