Ogan Mancarci
| Snapshot Date: 2025-06-19 13:25 -0400 (Thu, 19 Jun 2025) |
| git_url: https://git.bioconductor.org/packages/gemma.R |
| git_branch: devel |
| git_last_commit: 1c5fc99 |
| git_last_commit_date: 2025-06-18 17:21:10 -0400 (Wed, 18 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-06-20 12:06 -0400 (Fri, 20 Jun 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4514 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4361 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 1031 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4491 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4496 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 794/2309 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| gemma.R 3.5.3 (landing page) Ogan Mancarci
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
|
To the developers/maintainers of the gemma.R package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gemma.R.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: gemma.R |
| Version: 3.5.3 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL gemma.R |
| StartedAt: 2025-06-19 16:14:41 -0400 (Thu, 19 Jun 2025) |
| EndedAt: 2025-06-19 16:14:48 -0400 (Thu, 19 Jun 2025) |
| EllapsedTime: 6.8 seconds |
| RetCode: 1 |
| Status: ERROR |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL gemma.R
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
ERROR: dependencies ‘data.table’, ‘assertthat’, ‘R.utils’, ‘kableExtra’ are not available for package ‘gemma.R’
Perhaps try a variation of:
install.packages(c('data.table', 'assertthat', 'R.utils', 'kableExtra'))
* removing ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/gemma.R’