Multiple platform build/check report for BioC 3.22 - BUILD BIN results for dreamlet on palomino8

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.2 LTS)	x86_64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4810
palomino8	Windows Server 2022 Datacenter	x64	4.5.0 (2025-04-11 ucrt) -- "How About a Twenty-Six"	4548
kjohnson3	macOS 13.7.1 Ventura	arm64	4.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six"	4528
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4493
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*
BUILD BIN results for dreamlet on palomino8

To the developers/maintainers of the dreamlet package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/dreamlet.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
raw results
Summary

Package: dreamlet
Version: 1.7.1
Command: rm -rf dreamlet.buildbin-libdir && mkdir dreamlet.buildbin-libdir && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL --build --library=dreamlet.buildbin-libdir dreamlet_1.7.1.tar.gz
StartedAt: 2025-06-19 08:59:20 -0400 (Thu, 19 Jun 2025)
EndedAt: 2025-06-19 09:01:16 -0400 (Thu, 19 Jun 2025)
EllapsedTime: 115.9 seconds
RetCode: 0
Status: OK
PackageFile: dreamlet_1.7.1.zip
PackageFileSize: 3.86 MiB
Command output

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###
### Running command:
###
###   rm -rf dreamlet.buildbin-libdir && mkdir dreamlet.buildbin-libdir && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL --build --library=dreamlet.buildbin-libdir dreamlet_1.7.1.tar.gz
###
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* installing *source* package 'dreamlet' ...
** this is package 'dreamlet' version '1.7.1'
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 14.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.22-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include'   -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.22-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include'   -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c colsum_beachmat.cpp -o colsum_beachmat.o
In file included from F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:11,
                 from F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/beachmat.h:24,
                 from colsum_beachmat.cpp:1:
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:95:27: warning: 'virtual const double* beachmat::lin_matrix::get_row(size_t, double*, size_t, size_t)' was hidden [-Woverloaded-virtual=]
   95 |     virtual const double* get_row(size_t r, double* work, size_t first, size_t last) = 0;
      |                           ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:338:38: note:   by 'beachmat::lin_sparse_matrix::get_row'
  338 |     sparse_index<const double*, int> get_row(size_t r, double* work_x, int* work_i) {
      |                                      ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:66:24: warning: 'virtual const int* beachmat::lin_matrix::get_row(size_t, int*, size_t, size_t)' was hidden [-Woverloaded-virtual=]
   66 |     virtual const int* get_row(size_t r, int* work, size_t first, size_t last) = 0;
      |                        ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:338:38: note:   by 'beachmat::lin_sparse_matrix::get_row'
  338 |     sparse_index<const double*, int> get_row(size_t r, double* work_x, int* work_i) {
      |                                      ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:81:27: warning: 'virtual const double* beachmat::lin_matrix::get_col(size_t, double*, size_t, size_t)' was hidden [-Woverloaded-virtual=]
   81 |     virtual const double* get_col(size_t c, double* work, size_t first, size_t last) = 0;
      |                           ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:321:38: note:   by 'beachmat::lin_sparse_matrix::get_col'
  321 |     sparse_index<const double*, int> get_col(size_t c, double* work_x, int* work_i) {
      |                                      ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:52:24: warning: 'virtual const int* beachmat::lin_matrix::get_col(size_t, int*, size_t, size_t)' was hidden [-Woverloaded-virtual=]
   52 |     virtual const int* get_col(size_t c, int* work, size_t first, size_t last) = 0;
      |                        ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:321:38: note:   by 'beachmat::lin_sparse_matrix::get_col'
  321 |     sparse_index<const double*, int> get_col(size_t c, double* work_x, int* work_i) {
      |                                      ^~~~~~~
In file included from F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:12:
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::SparseArraySeed_reader<V, TIT>::SparseArraySeed_reader(Rcpp::RObject) [with V = Rcpp::Vector<13>; TIT = const int*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:561:46:   required from 'beachmat::lin_SparseArraySeed<V, TIT>::lin_SparseArraySeed(Rcpp::RObject) [with V = Rcpp::Vector<13>; TIT = const int*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
  561 |     lin_SparseArraySeed(Rcpp::RObject mat) : reader(mat) {
      |                                              ^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:36:39:   required from 'std::unique_ptr<M> beachmat::read_lin_sparse_block_raw(Rcpp::RObject) [with M = lin_matrix; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
   36 |             return std::unique_ptr<M>(new integer_SparseArraySeed(block));
      |                                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:65:57:   required from here
   65 |         auto ptr = read_lin_sparse_block_raw<lin_matrix>(block);
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:535:17: warning: comparison of integer expressions of different signedness: 'const size_t' {aka 'const long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
  535 |         if (nnz != x.size()) {
      |             ~~~~^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:45: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                       ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:73: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                                                   ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:593:35: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  593 |                 for (int v = 0; v < nnz; ++v, ++rowIt, ++colIt, ++xIt) {
      |                                 ~~^~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::SparseArraySeed_reader<V, TIT>::SparseArraySeed_reader(Rcpp::RObject) [with V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:561:46:   required from 'beachmat::lin_SparseArraySeed<V, TIT>::lin_SparseArraySeed(Rcpp::RObject) [with V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
  561 |     lin_SparseArraySeed(Rcpp::RObject mat) : reader(mat) {
      |                                              ^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:38:39:   required from 'std::unique_ptr<M> beachmat::read_lin_sparse_block_raw(Rcpp::RObject) [with M = lin_matrix; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
   38 |             return std::unique_ptr<M>(new double_SparseArraySeed(block));
      |                                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:65:57:   required from here
   65 |         auto ptr = read_lin_sparse_block_raw<lin_matrix>(block);
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:535:17: warning: comparison of integer expressions of different signedness: 'const size_t' {aka 'const long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
  535 |         if (nnz != x.size()) {
      |             ~~~~^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:45: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                       ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:73: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                                                   ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:593:35: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  593 |                 for (int v = 0; v < nnz; ++v, ++rowIt, ++colIt, ++xIt) {
      |                                 ~~^~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::SparseArraySeed_reader<V, TIT>::SparseArraySeed_reader(Rcpp::RObject) [with V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:561:46:   required from 'beachmat::lin_SparseArraySeed<V, TIT>::lin_SparseArraySeed(Rcpp::RObject) [with V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
  561 |     lin_SparseArraySeed(Rcpp::RObject mat) : reader(mat) {
      |                                              ^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:40:39:   required from 'std::unique_ptr<M> beachmat::read_lin_sparse_block_raw(Rcpp::RObject) [with M = lin_matrix; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
   40 |             return std::unique_ptr<M>(new logical_SparseArraySeed(block));
      |                                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/read_lin_block.h:65:57:   required from here
   65 |         auto ptr = read_lin_sparse_block_raw<lin_matrix>(block);
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:535:17: warning: comparison of integer expressions of different signedness: 'const size_t' {aka 'const long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
  535 |         if (nnz != x.size()) {
      |             ~~~~^~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:45: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                       ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:551:73: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  551 |                     if (lastR <= 0 || lastR > NR || lastC <= 0 || lastC > NC) {
      |                                                                   ~~~~~~^~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:593:35: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare]
  593 |                 for (int v = 0; v < nnz; ++v, ++rowIt, ++colIt, ++xIt) {
      |                                 ~~^~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::sparse_index<OUT, I> beachmat::Csparse_core<TIT, I, P>::get_row(size_t, ALT, I*, size_t, size_t) [with OUT = const int*; ALT = int*; TIT = const double*; I = int; P = long long unsigned int; size_t = long long unsigned int]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:650:42:   required from 'beachmat::sparse_index<OUT, int> beachmat::SparseArraySeed_reader<V, TIT>::get_row(size_t, ALT, int*, size_t, size_t) [with OUT = const int*; ALT = int*; V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; size_t = long long unsigned int]'
  650 |         return core.template get_row<OUT>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:596:51:   required from 'beachmat::sparse_index<const int*, int> beachmat::lin_SparseArraySeed<V, TIT>::get_row(size_t, int*, int*, size_t, size_t) [with V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; size_t = long long unsigned int]'
  596 |         return reader.template get_row<const int*>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:595:35:   required from here
  595 |     sparse_index<const int*, int> get_row(size_t r, int* work_x, int* work_i, size_t first, size_t last) {
      |                                   ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:250:22: warning: comparison of integer expressions of different signedness: 'const int' and 'const long long unsigned int' [-Wsign-compare]
  250 |             if (idex != *pIt && static_cast<size_t>(i[idex]) == r) {
      |                 ~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::sparse_index<OUT, I> beachmat::Csparse_core<TIT, I, P>::get_row(size_t, ALT, I*, size_t, size_t) [with OUT = const double*; ALT = double*; TIT = const double*; I = int; P = long long unsigned int; size_t = long long unsigned int]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:650:42:   required from 'beachmat::sparse_index<OUT, int> beachmat::SparseArraySeed_reader<V, TIT>::get_row(size_t, ALT, int*, size_t, size_t) [with OUT = const double*; ALT = double*; V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; size_t = long long unsigned int]'
  650 |         return core.template get_row<OUT>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:602:54:   required from 'beachmat::sparse_index<const double*, int> beachmat::lin_SparseArraySeed<V, TIT>::get_row(size_t, double*, int*, size_t, size_t) [with V = Rcpp::Vector<14, Rcpp::PreserveStorage>; TIT = const double*; size_t = long long unsigned int]'
  602 |         return reader.template get_row<const double*>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:601:38:   required from here
  601 |     sparse_index<const double*, int> get_row(size_t r, double* work_x, int* work_i, size_t first, size_t last) {
      |                                      ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:250:22: warning: comparison of integer expressions of different signedness: 'const int' and 'const long long unsigned int' [-Wsign-compare]
  250 |             if (idex != *pIt && static_cast<size_t>(i[idex]) == r) {
      |                 ~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::sparse_index<OUT, I> beachmat::Csparse_core<TIT, I, P>::get_row(size_t, ALT, I*, size_t, size_t) [with OUT = const int*; ALT = int*; TIT = const int*; I = int; P = long long unsigned int; size_t = long long unsigned int]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:650:42:   required from 'beachmat::sparse_index<OUT, int> beachmat::SparseArraySeed_reader<V, TIT>::get_row(size_t, ALT, int*, size_t, size_t) [with OUT = const int*; ALT = int*; V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; size_t = long long unsigned int]'
  650 |         return core.template get_row<OUT>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:596:51:   required from 'beachmat::sparse_index<const int*, int> beachmat::lin_SparseArraySeed<V, TIT>::get_row(size_t, int*, int*, size_t, size_t) [with V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; size_t = long long unsigned int]'
  596 |         return reader.template get_row<const int*>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:595:35:   required from here
  595 |     sparse_index<const int*, int> get_row(size_t r, int* work_x, int* work_i, size_t first, size_t last) {
      |                                   ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:250:22: warning: comparison of integer expressions of different signedness: 'const int' and 'const long long unsigned int' [-Wsign-compare]
  250 |             if (idex != *pIt && static_cast<size_t>(i[idex]) == r) {
      |                 ~~~~~^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h: In instantiation of 'beachmat::sparse_index<OUT, I> beachmat::Csparse_core<TIT, I, P>::get_row(size_t, ALT, I*, size_t, size_t) [with OUT = const double*; ALT = double*; TIT = const int*; I = int; P = long long unsigned int; size_t = long long unsigned int]':
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:650:42:   required from 'beachmat::sparse_index<OUT, int> beachmat::SparseArraySeed_reader<V, TIT>::get_row(size_t, ALT, int*, size_t, size_t) [with OUT = const double*; ALT = double*; V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; size_t = long long unsigned int]'
  650 |         return core.template get_row<OUT>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:602:54:   required from 'beachmat::sparse_index<const double*, int> beachmat::lin_SparseArraySeed<V, TIT>::get_row(size_t, double*, int*, size_t, size_t) [with V = Rcpp::Vector<10, Rcpp::PreserveStorage>; TIT = const int*; size_t = long long unsigned int]'
  602 |         return reader.template get_row<const double*>(r, work_x, work_i, first, last);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/lin_matrix.h:601:38:   required from here
  601 |     sparse_index<const double*, int> get_row(size_t r, double* work_x, int* work_i, size_t first, size_t last) {
      |                                      ^~~~~~~
F:/biocbuild/bbs-3.22-bioc/R/library/beachmat/include/beachmat3/Csparse_reader.h:250:22: warning: comparison of integer expressions of different signedness: 'const int' and 'const long long unsigned int' [-Wsign-compare]
  250 |             if (idex != *pIt && static_cast<size_t>(i[idex]) == r) {
      |                 ~~~~~^~~~~~~
g++ -shared -s -static-libgcc -o dreamlet.dll tmp.def RcppExports.o colsum_beachmat.o -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.22-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.22-bioc/meat/dreamlet.buildbin-libdir/00LOCK-dreamlet/00new/dreamlet/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'dreamlet' as dreamlet_1.7.1.zip
* DONE (dreamlet)