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This page was generated on 2025-08-09 12:07 -0400 (Sat, 09 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4818
palomino8Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4553
lconwaymacOS 12.7.1 Montereyx86_644.5.1 (2025-06-13) -- "Great Square Root" 4595
kjohnson3macOS 13.7.1 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4537
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1332/2317HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MOSim 2.5.0  (landing page)
Sonia Tarazona
Snapshot Date: 2025-08-08 13:45 -0400 (Fri, 08 Aug 2025)
git_url: https://git.bioconductor.org/packages/MOSim
git_branch: devel
git_last_commit: 866ff8d
git_last_commit_date: 2025-04-15 11:49:11 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'scran' which is only available as a source package that needs compilation
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


BUILD BIN results for MOSim on palomino8

To the developers/maintainers of the MOSim package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MOSim.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MOSim
Version: 2.5.0
Command: rm -rf MOSim.buildbin-libdir && mkdir MOSim.buildbin-libdir && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL --build --library=MOSim.buildbin-libdir MOSim_2.5.0.tar.gz
StartedAt: 2025-08-09 09:38:15 -0400 (Sat, 09 Aug 2025)
EndedAt: 2025-08-09 09:39:25 -0400 (Sat, 09 Aug 2025)
EllapsedTime: 69.7 seconds
RetCode: 0
Status:   OK  
PackageFile: MOSim_2.5.0.zip
PackageFileSize: 7.186 MiB

Command output

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### Running command:
###
###   rm -rf MOSim.buildbin-libdir && mkdir MOSim.buildbin-libdir && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD INSTALL --build --library=MOSim.buildbin-libdir MOSim_2.5.0.tar.gz
###
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* installing *source* package 'MOSim' ...
** this is package 'MOSim' version '2.5.0'
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 14.2.0'
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.22-bioc/R/library/cpp11/include' -I'F:/biocbuild/bbs-3.22-bioc/R/library/Rcpp/include'   -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c Random_number.cpp -o Random_number.o
g++ -std=gnu++17 -shared -s -static-libgcc -o MOSim.dll tmp.def Random_number.o -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.22-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.22-bioc/meat/MOSim.buildbin-libdir/00LOCK-MOSim/00new/MOSim/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'GenomeInfoDb' for request: 'merge' when loading 'Signac'
Warning: multiple methods tables found for 'seqnames'
Warning: replacing previous import 'dplyr::count' by 'matrixStats::count' when loading 'MOSim'
Creating a new generic function for 'simulate' in package 'MOSim'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'GenomeInfoDb' for request: 'merge' when loading 'Signac'
Warning: multiple methods tables found for 'seqnames'
Warning: replacing previous import 'dplyr::count' by 'matrixStats::count' when loading 'MOSim'
** testing if installed package can be loaded from final location
No methods found in package 'GenomeInfoDb' for request: 'merge' when loading 'Signac'
Warning: multiple methods tables found for 'seqnames'
Warning: replacing previous import 'dplyr::count' by 'matrixStats::count' when loading 'MOSim'
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MOSim' as MOSim_2.5.0.zip
* DONE (MOSim)