Laurent Gatto
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/synapter |
| Branch: RELEASE_3_9 |
| Last Commit: d014514 |
| Last Changed Date: 2019-05-02 11:53:37 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:26:39 -0400 (Wed, 16 Oct 2019).
| Package 1622/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| synapter 2.8.0 Laurent Gatto
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: synapter |
| Version: 2.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/synapter_2.8.0.tar.gz && rm -rf synapter.buildbin-libdir && mkdir synapter.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synapter.buildbin-libdir synapter_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL synapter_2.8.0.zip && rm synapter_2.8.0.tar.gz synapter_2.8.0.zip |
| StartedAt: 2019-10-15 20:54:05 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:55:58 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 113.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/synapter_2.8.0.tar.gz && rm -rf synapter.buildbin-libdir && mkdir synapter.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synapter.buildbin-libdir synapter_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL synapter_2.8.0.zip && rm synapter_2.8.0.tar.gz synapter_2.8.0.zip
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install for i386
* installing *source* package 'synapter' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'synapter'
finding HTML links ... done
MasterFdrResults-class html
MasterPeptides-class html
Synapter html
finding level-2 HTML links ... done
createUniquePeptideDbRds html
defunct html
estimateMasterFdr html
inspectPeptideScores html
makeMaster html
plotCrossMatching html
requantify html
rescaleForTop3 html
synapter-package html
synapterGuide html
synapterPlgsAgreement html
synapterTinyData html
synergise html
synergise2 html
** building package indices
** installing vignettes
'fragmentmatching.Rmd' using 'UTF-8'
'synapter.Rmd' using 'UTF-8'
'synapter2.Rmd' using 'UTF-8'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'synapter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'synapter' as synapter_2.8.0.zip
* DONE (synapter)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'synapter' successfully unpacked and MD5 sums checked