Hong Pan
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/GEM |
| Branch: RELEASE_3_9 |
| Last Commit: 668ee41 |
| Last Changed Date: 2019-05-02 11:54:02 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:36:01 -0400 (Wed, 16 Oct 2019).
| Package 618/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GEM 1.10.0 Hong Pan
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: GEM |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GEM_1.10.0.tar.gz && rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GEM_1.10.0.zip && rm GEM_1.10.0.tar.gz GEM_1.10.0.zip |
| StartedAt: 2019-10-15 19:08:52 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:09:23 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 30.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GEM_1.10.0.tar.gz && rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GEM_1.10.0.zip && rm GEM_1.10.0.tar.gz GEM_1.10.0.zip
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install for i386
* installing *source* package 'GEM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GEM'
finding HTML links ... done
GEM-package html
GEM_Emodel html
GEM_GUI html
GEM_GWASmodel html
GEM_Gmodel html
GEM_GxEmodel html
SlicedData-class html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpe21q5r/R.INSTALLd5c554527f2/GEM/man/SlicedData-class.Rd:89: file link 'rowMeans' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpe21q5r/R.INSTALLd5c554527f2/GEM/man/SlicedData-class.Rd:90: file link 'rowSums' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpe21q5r/R.INSTALLd5c554527f2/GEM/man/SlicedData-class.Rd:91: file link 'colMeans' in package 'base' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GEM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GEM' as GEM_1.10.0.zip
* DONE (GEM)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'GEM' successfully unpacked and MD5 sums checked