| Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:18:54 -0400 (Tue, 09 Apr 2019).
| Package 1323/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RefNet 1.19.0 Paul Shannon
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | ERROR | skipped | skipped | |||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | ERROR | skipped | skipped |
| Package: RefNet |
| Version: 1.19.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RefNet_1.19.0.tar.gz && rm -rf RefNet.buildbin-libdir && mkdir RefNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RefNet.buildbin-libdir RefNet_1.19.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RefNet_1.19.0.zip && rm RefNet_1.19.0.tar.gz RefNet_1.19.0.zip |
| StartedAt: 2019-04-08 20:37:55 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 20:38:24 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 28.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RefNet_1.19.0.tar.gz && rm -rf RefNet.buildbin-libdir && mkdir RefNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RefNet.buildbin-libdir RefNet_1.19.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RefNet_1.19.0.zip && rm RefNet_1.19.0.tar.gz RefNet_1.19.0.zip
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install for i386
* installing *source* package 'RefNet' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
** help
*** installing help indices
converting help for package 'RefNet'
finding HTML links ... done
RefNet-class html
detectDuplicateInteractions html
interactions html
pickBestFromDupGroup html
providerClasses html
providers html
pubmedAbstract html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RefNet' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
* MD5 sums
packaged installation of 'RefNet' as RefNet_1.19.0.zip
* DONE (RefNet)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'RefNet' successfully unpacked and MD5 sums checked