Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for Rcwl on merida2

This page was generated on 2019-04-09 13:39:12 -0400 (Tue, 09 Apr 2019).

Package 1306/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rcwl 0.99.17
Qiang Hu
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/Rcwl
Branch: master
Last Commit: eeda203
Last Changed Date: 2019-04-05 10:31:22 -0400 (Fri, 05 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  ERROR  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  ERROR  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64 [ ERROR ] ERROR  skipped  skipped 

Summary

Package: Rcwl
Version: 0.99.17
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL Rcwl
StartedAt: 2019-04-08 18:46:37 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:47:35 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 58.0 seconds
RetCode: 1
Status:  ERROR 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL Rcwl
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’
* installing *source* package ‘Rcwl’ ...
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in system("which cwltool", intern = TRUE) :
  running command 'which cwltool' had status 1
Error: package or namespace load failed for ‘Rcwl’:
 .onLoad failed in loadNamespace() for 'Rcwl', details:
  call: fun(libname, pkgname)
  error: cwltool is not found, Please install cwltool first!
https://github.com/common-workflow-language/cwltool#install
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/Rcwl’