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BUILD BIN report for clusterProfiler on tokay2

This page was generated on 2018-10-17 08:35:14 -0400 (Wed, 17 Oct 2018).

Package 263/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clusterProfiler 3.8.1
Guangchuang Yu
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/clusterProfiler
Branch: RELEASE_3_7
Last Commit: 81e1a7a
Last Changed Date: 2018-09-17 21:30:59 -0400 (Mon, 17 Sep 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: clusterProfiler
Version: 3.8.1
Command: rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.8.1.tar.gz
StartedAt: 2018-10-17 06:10:34 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:11:11 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 36.9 seconds
RetCode: 0
Status:  OK  
PackageFile: clusterProfiler_3.8.1.zip
PackageFileSize: 959.9 KiB

Command output

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###
### Running command:
###
###   rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.8.1.tar.gz
###
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install for i386

* installing *source* package 'clusterProfiler' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clusterProfiler'
    finding HTML links ... done
    DataSet                                 html  
    GSEA                                    html  
    Gff2GeneTable                           html  
    KEGG_path2extid                         html  
    bitr                                    html  
    bitr_kegg                               html  
    browseKEGG                              html  
    buildGOmap                              html  
    clusterProfiler-package                 html  
    compareCluster                          html  
    compareClusterResult-class              html  
    finding level-2 HTML links ... done

    dotplot-methods                         html  
    download_KEGG                           html  
    dropGO                                  html  
    enrichDAVID                             html  
    enrichGO                                html  
    enrichKEGG                              html  
    enrichMKEGG                             html  
    enricher                                html  
    fortify                                 html  
    getGOLevel                              html  
    go2ont                                  html  
    go2term                                 html  
    gofilter                                html  
    groupGO                                 html  
    groupGOResult-class                     html  
    gseGO                                   html  
    gseKEGG                                 html  
    gseMKEGG                                html  
    idType                                  html  
    ko2name                                 html  
    merge_result                            html  
    plotGOgraph                             html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmps3OSka/R.INSTALL1504203c778a/clusterProfiler/man/plotGOgraph.Rd:30: file link 'showSigOfNodes' in package 'topGO' does not exist and so has been treated as a topic
    plotting.clusterProfile                 html  
    read.gmt                                html  
    reexports                               html  
    search_kegg_organism                    html  
    simplify-methods                        html  
    uniprot_get                             html  
    viewKEGG                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'clusterProfiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clusterProfiler' as clusterProfiler_3.8.1.zip
* DONE (clusterProfiler)
In R CMD INSTALL
In R CMD INSTALL