Iain Wallace
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/bgafun |
| Branch: RELEASE_3_7 |
| Last Commit: ed3d701 |
| Last Changed Date: 2018-04-30 10:35:07 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:33:34 -0400 (Wed, 17 Oct 2018).
| Package 111/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| bgafun 1.42.0 Iain Wallace
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: bgafun |
| Version: 1.42.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/bgafun_1.42.0.tar.gz && rm -rf bgafun.buildbin-libdir && mkdir bgafun.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bgafun.buildbin-libdir bgafun_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL bgafun_1.42.0.zip && rm bgafun_1.42.0.tar.gz bgafun_1.42.0.zip |
| StartedAt: 2018-10-16 19:14:25 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 19:15:14 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 48.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/bgafun_1.42.0.tar.gz && rm -rf bgafun.buildbin-libdir && mkdir bgafun.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bgafun.buildbin-libdir bgafun_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL bgafun_1.42.0.zip && rm bgafun_1.42.0.tar.gz bgafun_1.42.0.zip
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install for i386
* installing *source* package 'bgafun' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'bgafun'
finding HTML links ... done
Calculate_Row_Weights html
Henikoff_weights html
LDH html
LDH.aap html
LDH.aap.ave html
LDH.amino html
LDH.amino.gapless html
LDH.amino.pseudo html
LDH.groups html
Weight_Amino html
add_pseudo_counts html
amino_counts html
average_cols_aap html
bgafun html
calculate_pseudo html
convertAAP.package html
convert_aln_AAP html
convert_aln_amino html
convert_amino.package html
convert_seq_AAP html
convert_seq_amino html
create_colnames_AAP html
create_colnames_amino html
create_probab html
create_profile html
create_profile_strings html
pseudo_counts html
remove_gaps html
remove_gaps_groups html
run_between_pca html
sum_20_aln html
sum_20_cols html
sum_aln html
top_residues_2_groups html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'bgafun' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bgafun' as bgafun_1.42.0.zip
* DONE (bgafun)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'bgafun' successfully unpacked and MD5 sums checked
In R CMD INSTALL