Aaron Taudt
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/methimpute |
| Branch: RELEASE_3_6 |
| Last Commit: 0d0322b |
| Last Changed Date: 2017-10-30 12:42:01 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:30:38 -0400 (Thu, 12 Apr 2018).
| Package 831/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| methimpute 1.0.0 Aaron Taudt
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | [ WARNINGS ] | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: methimpute |
| Version: 1.0.0 |
| Command: rm -rf methimpute.buildbin-libdir methimpute.Rcheck && mkdir methimpute.buildbin-libdir methimpute.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=methimpute.buildbin-libdir methimpute_1.0.0.tar.gz >methimpute.Rcheck\00install.out 2>&1 && cp methimpute.Rcheck\00install.out methimpute-install.out && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=methimpute.buildbin-libdir --install="check:methimpute-install.out" --force-multiarch --no-vignettes --timings methimpute_1.0.0.tar.gz |
| StartedAt: 2018-04-12 01:19:17 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 01:24:36 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 318.6 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: methimpute.Rcheck |
| Warnings: 1 |
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###
### Running command:
###
### rm -rf methimpute.buildbin-libdir methimpute.Rcheck && mkdir methimpute.buildbin-libdir methimpute.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=methimpute.buildbin-libdir methimpute_1.0.0.tar.gz >methimpute.Rcheck\00install.out 2>&1 && cp methimpute.Rcheck\00install.out methimpute-install.out && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=methimpute.buildbin-libdir --install="check:methimpute-install.out" --force-multiarch --no-vignettes --timings methimpute_1.0.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.Rcheck'
* using R version 3.4.4 (2018-03-15)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'methimpute/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'methimpute' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'methimpute' can be installed ... WARNING
Found the following significant warnings:
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_TEs.Rd:9: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_TEs.Rd:7: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_genes.Rd:9: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_genes.Rd:7: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binCounts.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binCounts.Rd:15: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binMethylome.Rd:11: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binMethylome.Rd:20: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binPositions.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binPositions.Rd:15: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/importRene.Rd:20: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/inflateMethylome.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/inflateMethylome.Rd:12: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/methimputeBinomialHMM.Rd:11: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/methimputeData.Rd:7: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/plotting.Rd:37: missing file link 'GRanges'
See 'C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files for i386 is not available
Note: information on .o files for x64 is not available
File 'C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.buildbin-libdir/methimpute/libs/i386/methimpute.dll':
Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
Found 'printf', possibly from 'printf' (C)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs. The detected symbols are linked into the code but
might come from libraries and not actually be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
plotting 21.00 0.16 20.54
exportMethylome 6.22 0.08 5.81
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
plotting 23.14 0.20 22.86
exportMethylome 6.20 0.09 5.76
extractCytosinesFromFASTA 5.08 0.16 5.24
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
'C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.Rcheck/00check.log'
for details.
methimpute.Rcheck/00install.out
install for i386
* installing *source* package 'methimpute' ...
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c densities.cpp -o densities.o
densities.cpp: In member function 'virtual void BinomialTestContext::calc_densities(Rcpp::Matrix<14>::Row&)':
densities.cpp:614:138: warning: 'prob_context' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (verbosity >= 4) Rprintf("obs_test[t=%d] = %d, obs_total[t] = %d, prob_context = %g\n", t, obs_test[t], obs_total[t], prob_context);
^
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c fitHMM.cpp -o fitHMM.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c fitHMM_context.cpp -o fitHMM_context.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c hmm_context.cpp -o hmm_context.o
hmm_context.cpp: In destructor 'HMM_context::˜HMM_context()':
hmm_context.cpp:68:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<this->emissionDensities.size(); i++)
^
hmm_context.cpp: In member function 'Rcpp::List HMM_context::baumWelch(double, double, double)':
hmm_context.cpp:378:22: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
if (this->NSTATES == 2 | this->UPDATE_PROCEDURE == 1)
^
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c methimpute_init.c -o methimpute_init.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c scalehmm.cpp -o scalehmm.o
scalehmm.cpp: In destructor 'ScaleHMM::˜ScaleHMM()':
scalehmm.cpp:311:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<this->emissionDensities.size(); i++)
^
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o methimpute.dll tmp.def RcppExports.o densities.o fitHMM.o fitHMM_context.o hmm_context.o methimpute_init.o scalehmm.o -fopenmp -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.buildbin-libdir/methimpute/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'methimpute'
finding HTML links ... done
arabidopsis_TEs html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_TEs.Rd:9: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_TEs.Rd:7: missing file link 'GRanges'
arabidopsis_chromosomes html
arabidopsis_genes html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_genes.Rd:9: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/arabidopsis_genes.Rd:7: missing file link 'GRanges'
arabidopsis_toydata html
binCounts html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binCounts.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binCounts.Rd:15: missing file link 'GRanges'
binMethylome html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binMethylome.Rd:11: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binMethylome.Rd:20: missing file link 'GRanges'
binPositions html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binPositions.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/binPositions.Rd:15: missing file link 'GRanges'
binomialTestMethylation html
callMethylation html
callMethylationSeparate html
collapseBins html
distanceCorrelation html
estimateTransDist html
exportMethylome html
extractCytosinesFromFASTA html
finding level-2 HTML links ... done
getDistinctColors html
getPosteriors html
getStateColors html
import html
importRene html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/importRene.Rd:20: missing file link 'GRanges'
inflateMethylome html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/inflateMethylome.Rd:10: missing file link 'GRanges'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/inflateMethylome.Rd:12: missing file link 'GRanges'
loadFromFiles html
methimpute-objects html
methimpute-package html
methimputeBinomialHMM html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/methimputeBinomialHMM.Rd:11: missing file link 'GRanges'
methimputeData html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/methimputeData.Rd:7: missing file link 'GRanges'
parameterScan html
plotting html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpk3ZSnb/R.INSTALL2d784cfc1174/methimpute/man/plotting.Rd:37: missing file link 'GRanges'
print.methimputeBinomialHMM html
transCoord html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'methimpute' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c densities.cpp -o densities.o
densities.cpp: In member function 'virtual void BinomialTestContext::calc_densities(Rcpp::Matrix<14>::Row&)':
densities.cpp:614:138: warning: 'prob_context' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (verbosity >= 4) Rprintf("obs_test[t=%d] = %d, obs_total[t] = %d, prob_context = %g\n", t, obs_test[t], obs_total[t], prob_context);
^
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c fitHMM.cpp -o fitHMM.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c fitHMM_context.cpp -o fitHMM_context.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c hmm_context.cpp -o hmm_context.o
hmm_context.cpp: In destructor 'HMM_context::˜HMM_context()':
hmm_context.cpp:68:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<this->emissionDensities.size(); i++)
^
hmm_context.cpp: In member function 'Rcpp::List HMM_context::baumWelch(double, double, double)':
hmm_context.cpp:378:22: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
if (this->NSTATES == 2 | this->UPDATE_PROCEDURE == 1)
^
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c methimpute_init.c -o methimpute_init.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/local323/include" -fopenmp -O2 -Wall -mtune=generic -c scalehmm.cpp -o scalehmm.o
scalehmm.cpp: In destructor 'ScaleHMM::˜ScaleHMM()':
scalehmm.cpp:311:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<this->emissionDensities.size(); i++)
^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o methimpute.dll tmp.def RcppExports.o densities.o fitHMM.o fitHMM_context.o hmm_context.o methimpute_init.o scalehmm.o -fopenmp -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/methimpute.buildbin-libdir/methimpute/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'methimpute' as methimpute_1.0.0.zip
* DONE (methimpute)
In R CMD INSTALL
In R CMD INSTALL
|
methimpute.Rcheck/examples_i386/methimpute-Ex.timings
|
methimpute.Rcheck/examples_x64/methimpute-Ex.timings
|