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INSTALL report for PGSEA on tokay1

This page was generated on 2018-04-12 13:18:38 -0400 (Thu, 12 Apr 2018).

Package 1027/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PGSEA 1.52.0
Karl Dykema
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/PGSEA
Branch: RELEASE_3_6
Last Commit: 9e2d59c
Last Changed Date: 2017-10-30 12:39:20 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PGSEA
Version: 1.52.0
Command: rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/PGSEA_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=PGSEA.buildbin-libdir --merge-multiarch PGSEA_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL PGSEA_1.52.0.zip && rm PGSEA_1.52.0.tar.gz PGSEA_1.52.0.zip
StartedAt: 2018-04-11 18:29:13 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:30:08 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 55.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/PGSEA_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=PGSEA.buildbin-libdir --merge-multiarch PGSEA_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL PGSEA_1.52.0.zip  && rm PGSEA_1.52.0.tar.gz PGSEA_1.52.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  957k  100  957k    0     0  30.5M      0 --:--:-- --:--:-- --:--:-- 34.6M

install for i386

* installing *source* package 'PGSEA' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'PGSEA'
    finding HTML links ... done
    GOLUBmcs                                html  
    PGSEA                                   html  
    VAIgsc                                  html  
    VAImcs                                  html  
    aggregateExprs                          html  
    convertSmc                              html  
    editSmc                                 html  
    go2smc                                  html  
    kegg2smc                                html  
    nbEset                                  html  
    readGmt                                 html  
    readSmc                                 html  
    scanSmc                                 html  
    smcPlot                                 html  
    writeGmt                                html  
    writeSmc                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'PGSEA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PGSEA' as PGSEA_1.52.0.zip
* DONE (PGSEA)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'PGSEA' successfully unpacked and MD5 sums checked
In R CMD INSTALL