Vilhelm Suksi
| Snapshot Date: 2025-11-17 13:45 -0500 (Mon, 17 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/notameStats |
| git_branch: RELEASE_3_22 |
| git_last_commit: 58a6cb5 |
| git_last_commit_date: 2025-10-29 11:38:32 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-20 12:05 -0500 (Thu, 20 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4615 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble" | 4610 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4598 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4668 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1474/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| notameStats 1.0.0 (landing page) Vilhelm Suksi
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the notameStats package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/notameStats.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: notameStats |
| Version: 1.0.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:notameStats.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings notameStats_1.0.0.tar.gz |
| StartedAt: 2025-11-18 11:20:28 -0500 (Tue, 18 Nov 2025) |
| EndedAt: 2025-11-18 11:30:49 -0500 (Tue, 18 Nov 2025) |
| EllapsedTime: 620.7 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: notameStats.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:notameStats.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings notameStats_1.0.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/notameStats.Rcheck’
* using R version 4.5.2 Patched (2025-11-05 r88990)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘notameStats/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘notameStats’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘notameStats’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License stub is invalid DCF.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
perform_auc 40.146 5.543 14.283
pls_da 40.177 2.869 44.323
perform_lmer 37.461 4.833 13.014
muvr_analysis 34.509 0.855 36.694
perform_non_parametric 19.142 8.170 9.765
perform_correlation_tests 14.223 6.060 9.686
pls 18.649 0.498 19.398
perform_logistic 11.591 4.621 5.087
perform_homoscedasticity_tests 11.187 4.551 5.127
perform_lm 8.018 3.606 3.436
summary_statistics 7.249 3.642 1.949
perform_lm_anova 4.929 2.408 2.211
perform_oneway_anova 4.457 2.562 2.092
perform_kruskal_wallis 4.194 1.844 1.840
perform_t_test 3.448 2.349 3.128
summarize_results 3.958 1.526 3.159
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/notameStats.Rcheck/00check.log’
for details.
notameStats.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL notameStats ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘notameStats’ ... ** this is package ‘notameStats’ version ‘1.0.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (notameStats)
notameStats.Rcheck/tests/testthat.Rout
R version 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(notameStats)
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats
Attaching package: 'MatrixGenerics'
The following objects are masked from 'package:matrixStats':
colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
colWeightedMeans, colWeightedMedians, colWeightedSds,
colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
rowWeightedSds, rowWeightedVars
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: Seqinfo
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'Biobase'
The following object is masked from 'package:MatrixGenerics':
rowMedians
The following objects are masked from 'package:matrixStats':
anyMissing, rowMedians
>
> test_check("notameStats")
Running tests in parallel requires the 3rd edition.
INFO [2025-11-18 11:29:24] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-18 11:29:24] Cohen's D computed.
INFO [2025-11-18 11:29:24] Starting to compute Cohen's D between groups B & A
INFO [2025-11-18 11:29:25] Cohen's D computed.
INFO [2025-11-18 11:29:26] Starting to compute fold changes.
INFO [2025-11-18 11:29:26] Fold changes computed.
INFO [2025-11-18 11:29:26] Starting to compute fold changes.
INFO [2025-11-18 11:29:26] Fold changes computed.
INFO [2025-11-18 11:29:27] Starting linear regression.
INFO [2025-11-18 11:29:30] Linear regression performed.
INFO [2025-11-18 11:29:31] Starting linear regression.
INFO [2025-11-18 11:29:34] Linear regression performed.
INFO [2025-11-18 11:29:35]
92% of features flagged for low quality
INFO [2025-11-18 11:29:35] Starting linear regression.
INFO [2025-11-18 11:29:38] Linear regression performed.
INFO [2025-11-18 11:29:38] Starting logistic regression
INFO [2025-11-18 11:29:43] Logistic regression performed.
INFO [2025-11-18 11:29:43] Starting logistic regression
INFO [2025-11-18 11:29:47] Logistic regression performed.
INFO [2025-11-18 11:29:48] Starting to compute Cohen's D between groups B & A
INFO [2025-11-18 11:29:48] Cohen's D computed.
INFO [2025-11-18 11:29:48] Starting to compute Cohen's D between groups C & A
INFO [2025-11-18 11:29:48] Cohen's D computed.
INFO [2025-11-18 11:29:48] Starting to compute Cohen's D between groups C & B
INFO [2025-11-18 11:29:49] Cohen's D computed.
INFO [2025-11-18 11:29:51] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-18 11:29:51] Cohen's D computed.
INFO [2025-11-18 11:29:51] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-18 11:29:51] Cohen's D computed.
INFO [2025-11-18 11:29:51] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-18 11:29:51] Cohen's D computed.
INFO [2025-11-18 11:29:52] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-18 11:29:52] Cohen's D computed.
INFO [2025-11-18 11:29:52] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-18 11:29:52] Cohen's D computed.
INFO [2025-11-18 11:29:53] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-18 11:29:53] Cohen's D computed.
INFO [2025-11-18 11:29:53] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-18 11:29:53] Cohen's D computed.
INFO [2025-11-18 11:29:53] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-18 11:29:54] Cohen's D computed.
INFO [2025-11-18 11:29:54] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-18 11:29:54] Cohen's D computed.
INFO [2025-11-18 11:29:54] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-18 11:29:55] Cohen's D computed.
INFO [2025-11-18 11:29:55] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-18 11:29:55] Cohen's D computed.
INFO [2025-11-18 11:29:55] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-18 11:29:55] Cohen's D computed.
INFO [2025-11-18 11:29:56] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-18 11:29:56] Cohen's D computed.
INFO [2025-11-18 11:29:56] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-18 11:29:56] Cohen's D computed.
INFO [2025-11-18 11:29:56] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-18 11:29:57] Cohen's D computed.
INFO [2025-11-18 11:29:57] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-18 11:29:57] Cohen's D computed.
INFO [2025-11-18 11:29:57] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-18 11:29:57] Cohen's D computed.
INFO [2025-11-18 11:29:57] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-18 11:29:58] Cohen's D computed.
INFO [2025-11-18 11:29:58] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-18 11:29:58] Cohen's D computed.
INFO [2025-11-18 11:29:58] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-18 11:29:59] Cohen's D computed.
INFO [2025-11-18 11:29:59] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-18 11:29:59] Cohen's D computed.
INFO [2025-11-18 11:29:59] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-18 11:30:00] Cohen's D computed.
INFO [2025-11-18 11:30:00] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-18 11:30:00] Cohen's D computed.
INFO [2025-11-18 11:30:00] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-18 11:30:01] Cohen's D computed.
INFO [2025-11-18 11:30:01] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-18 11:30:01] Cohen's D computed.
INFO [2025-11-18 11:30:01] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-18 11:30:01] Cohen's D computed.
INFO [2025-11-18 11:30:02] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-18 11:30:02] Cohen's D computed.
INFO [2025-11-18 11:30:02] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-18 11:30:02] Cohen's D computed.
INFO [2025-11-18 11:30:03] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-18 11:30:03] Cohen's D computed.
INFO [2025-11-18 11:30:03] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-18 11:30:03] Cohen's D computed.
INFO [2025-11-18 11:30:04] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-18 11:30:04] Cohen's D computed.
INFO [2025-11-18 11:30:04] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-18 11:30:04] Cohen's D computed.
INFO [2025-11-18 11:30:04] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-18 11:30:05] Cohen's D computed.
INFO [2025-11-18 11:30:05] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-18 11:30:05] Cohen's D computed.
INFO [2025-11-18 11:30:05] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-18 11:30:05] Cohen's D computed.
INFO [2025-11-18 11:30:06] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:06] Found 20 complete pairs.
INFO [2025-11-18 11:30:06] Paired tests performed.
INFO [2025-11-18 11:30:07] Starting tests for 1 & 2
INFO [2025-11-18 11:30:07] Tests performed
INFO [2025-11-18 11:30:07] Starting tests for 1 & 3
INFO [2025-11-18 11:30:07] Tests performed
INFO [2025-11-18 11:30:07] Starting tests for 2 & 3
INFO [2025-11-18 11:30:08] Tests performed
INFO [2025-11-18 11:30:08] Starting tests for 1 & 2
INFO [2025-11-18 11:30:08] Tests performed
INFO [2025-11-18 11:30:09] Starting tests for 1 & 3
INFO [2025-11-18 11:30:09] Tests performed
INFO [2025-11-18 11:30:09] Starting tests for 2 & 3
INFO [2025-11-18 11:30:10] Tests performed
INFO [2025-11-18 11:30:10] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:10] Found 4 complete pairs.
INFO [2025-11-18 11:30:10] Paired tests performed.
INFO [2025-11-18 11:30:10] Starting paired tests for 1 & 3
INFO [2025-11-18 11:30:10] Found 4 complete pairs.
INFO [2025-11-18 11:30:11] Paired tests performed.
INFO [2025-11-18 11:30:11] Starting paired tests for 2 & 3
INFO [2025-11-18 11:30:11] Found 4 complete pairs.
INFO [2025-11-18 11:30:11] Paired tests performed.
INFO [2025-11-18 11:30:12] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:12] Found 8 complete pairs.
INFO [2025-11-18 11:30:12] Paired tests performed.
INFO [2025-11-18 11:30:12] Starting paired tests for 1 & 3
INFO [2025-11-18 11:30:12] Found 8 complete pairs.
INFO [2025-11-18 11:30:12] Paired tests performed.
INFO [2025-11-18 11:30:13] Starting paired tests for 2 & 3
INFO [2025-11-18 11:30:13] Found 8 complete pairs.
INFO [2025-11-18 11:30:13] Paired tests performed.
INFO [2025-11-18 11:30:13] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:13] Found 4 complete pairs.
INFO [2025-11-18 11:30:14] Paired tests performed.
INFO [2025-11-18 11:30:14] Starting paired tests for 1 & 3
INFO [2025-11-18 11:30:14] Found 4 complete pairs.
INFO [2025-11-18 11:30:14] Paired tests performed.
INFO [2025-11-18 11:30:14] Starting paired tests for 2 & 3
INFO [2025-11-18 11:30:14] Found 4 complete pairs.
INFO [2025-11-18 11:30:15] Paired tests performed.
INFO [2025-11-18 11:30:16] Starting tests for A & B
INFO [2025-11-18 11:30:17] Tests performed
INFO [2025-11-18 11:30:19] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:19] Found 20 complete pairs.
INFO [2025-11-18 11:30:21] Paired tests performed.
INFO [2025-11-18 11:30:21] Starting tests for 1 & 2
INFO [2025-11-18 11:30:22] Tests performed
INFO [2025-11-18 11:30:23] Starting tests for 1 & 3
INFO [2025-11-18 11:30:24] Tests performed
INFO [2025-11-18 11:30:24] Starting tests for 2 & 3
INFO [2025-11-18 11:30:25] Tests performed
INFO [2025-11-18 11:30:25] Starting tests for 1 & 2
INFO [2025-11-18 11:30:26] Tests performed
INFO [2025-11-18 11:30:26] Starting tests for 1 & 3
INFO [2025-11-18 11:30:27] Tests performed
INFO [2025-11-18 11:30:27] Starting tests for 2 & 3
INFO [2025-11-18 11:30:28] Tests performed
INFO [2025-11-18 11:30:28] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:28] Found 4 complete pairs.
INFO [2025-11-18 11:30:28] Paired tests performed.
INFO [2025-11-18 11:30:29] Starting paired tests for 1 & 3
INFO [2025-11-18 11:30:29] Found 4 complete pairs.
INFO [2025-11-18 11:30:29] Paired tests performed.
INFO [2025-11-18 11:30:29] Starting paired tests for 2 & 3
INFO [2025-11-18 11:30:29] Found 4 complete pairs.
INFO [2025-11-18 11:30:29] Paired tests performed.
INFO [2025-11-18 11:30:30] Starting correlation tests.
INFO [2025-11-18 11:30:30] Performing correlation tests for single object
INFO [2025-11-18 11:30:30] Correlation tests performed.
INFO [2025-11-18 11:30:30] Starting correlation tests.
INFO [2025-11-18 11:30:30] Starting correlation tests.
INFO [2025-11-18 11:30:30] Starting correlation tests.
INFO [2025-11-18 11:30:30] Starting correlation tests.
INFO [2025-11-18 11:30:31] Performing correlation tests for two objects
INFO [2025-11-18 11:30:31] Correlation tests performed.
INFO [2025-11-18 11:30:31] Starting correlation tests.
INFO [2025-11-18 11:30:31] Performing correlation tests for two objects
INFO [2025-11-18 11:30:32] Correlation tests performed.
INFO [2025-11-18 11:30:32] Starting paired tests for 1 & 2
INFO [2025-11-18 11:30:32] Found 20 complete pairs.
INFO [2025-11-18 11:30:33] Paired tests performed.
INFO [2025-11-18 11:30:34] Starting tests for A & B
INFO [2025-11-18 11:30:34] Tests performed
[ FAIL 0 | WARN 1 | SKIP 0 | PASS 88 ]
[ FAIL 0 | WARN 1 | SKIP 0 | PASS 88 ]
>
> proc.time()
user system elapsed
129.693 56.229 96.136
notameStats.Rcheck/notameStats-Ex.timings
| name | user | system | elapsed | |
| cohens_d | 4.150 | 0.612 | 4.146 | |
| fit_rf | 0.338 | 0.060 | 0.401 | |
| fold_change | 1.013 | 0.794 | 0.700 | |
| importance_rf | 0.340 | 0.056 | 0.399 | |
| muvr_analysis | 34.509 | 0.855 | 36.694 | |
| perform_auc | 40.146 | 5.543 | 14.283 | |
| perform_correlation_tests | 14.223 | 6.060 | 9.686 | |
| perform_homoscedasticity_tests | 11.187 | 4.551 | 5.127 | |
| perform_kruskal_wallis | 4.194 | 1.844 | 1.840 | |
| perform_lm | 8.018 | 3.606 | 3.436 | |
| perform_lm_anova | 4.929 | 2.408 | 2.211 | |
| perform_lmer | 37.461 | 4.833 | 13.014 | |
| perform_logistic | 11.591 | 4.621 | 5.087 | |
| perform_non_parametric | 19.142 | 8.170 | 9.765 | |
| perform_oneway_anova | 4.457 | 2.562 | 2.092 | |
| perform_permanova | 2.968 | 0.223 | 3.255 | |
| perform_t_test | 3.448 | 2.349 | 3.128 | |
| pls | 18.649 | 0.498 | 19.398 | |
| pls_da | 40.177 | 2.869 | 44.323 | |
| summarize_results | 3.958 | 1.526 | 3.159 | |
| summary_statistics | 7.249 | 3.642 | 1.949 | |