August Guang
| Snapshot Date: 2025-08-14 13:40 -0400 (Thu, 14 Aug 2025) |
| git_url: https://git.bioconductor.org/packages/qckitfastq |
| git_branch: RELEASE_3_21 |
| git_last_commit: c160df2 |
| git_last_commit_date: 2025-04-15 11:42:05 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-08-18 11:42 -0400 (Mon, 18 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4824 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4566 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4604 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4545 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4579 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1654/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| qckitfastq 1.24.0 (landing page) August Guang
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the qckitfastq package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/qckitfastq.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: qckitfastq |
| Version: 1.24.0 |
| Command: chmod a+r qckitfastq -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data qckitfastq |
| StartedAt: 2025-08-14 21:28:38 -0400 (Thu, 14 Aug 2025) |
| EndedAt: 2025-08-14 21:29:55 -0400 (Thu, 14 Aug 2025) |
| EllapsedTime: 76.9 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r qckitfastq -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data qckitfastq ### ############################################################################## ############################################################################## * checking for file 'qckitfastq/DESCRIPTION' ... OK * preparing 'qckitfastq': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'vignette-qckitfastq.Rmd' using rmarkdown pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. pdftex: major issue: So far, you have not checked for updates as a MiKTeX user. pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. ! LaTeX Error: File `tabu.sty' not found. ! Emergency stop. <read *> ! pdflatex: major issue: So far, you have not checked for updates as a MiKTeX user. Error: processing vignette 'vignette-qckitfastq.Rmd' failed with diagnostics: LaTeX failed to compile E:/biocbuild/bbs-3.21-bioc/tmpdir/Rtmp0COsnb/Rbuildbbc158041b7/qckitfastq/vignettes/vignette-qckitfastq.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See vignette-qckitfastq.log for more info. --- failed re-building 'vignette-qckitfastq.Rmd' SUMMARY: processing the following file failed: 'vignette-qckitfastq.Rmd' Error: Vignette re-building failed. Execution halted