R version 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup"
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> # Script needed to run testthat automatically from ‘R CMD check’. See
> # testthat::test_dir documentation.
> library(testthat)
> library(biodbKegg)
> Sys.setenv(TESTTHAT_REPORTER="summary")
> test_check("biodbKegg")
[ FAIL 35 | WARN 5 | SKIP 0 | PASS 1549 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_long_100_compound.R:16:1'): annotateMzValues() accepts a single vector. ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
     ▆
  1. ├─base::do.call(fct, params)
  2. └─biodb (local) `<fn>`(conn = `<KggCmpnC>`, opt = `<named list>`)
  3.   └─conn$annotateMzValues(...)
  4.     └─self$getEntry(ids, drop = FALSE)
  5.       └─private$bdb$getFactory()$getEntry(self$getId(), id = id, drop = drop)
  6.         └─private$loadEntries(conn$getId(), missing.ids, drop = FALSE)
  7.           └─conn$getEntryContent(ids)
  8.             └─self$getEntryContentFromDb(ch.missing.ids)
  9.               └─private$doGetEntryContentFromDb(entry.id)
 10.                 └─private$doGetEntryContentOneByOne(id)
 11.                   └─scheduler$sendRequest(requests[[i]])
 12.                     └─cch$saveContentToFile(...)
 13.                       └─private$doSaveContentToFile(...)
 14.                         └─biodb:::saveContentsToFiles(file.paths, content)
 15.                           └─base::mapply(function(cnt, f) cat(cnt, file = f), contents, files)
 16.                             └─biodb (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
 17.                               └─base::cat(cnt, file = f)
 18.                                 └─base::file(file, ifelse(append, "a", "w"))
── Error ('test_long_100_compound.R:16:1'): ppm tolerance works in annotateMzValues() ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
     ▆
  1. ├─base::do.call(fct, params)
  2. └─biodb (local) `<fn>`(conn = `<KggCmpnC>`, opt = `<named list>`)
  3.   └─conn$annotateMzValues(...)
  4.     └─self$getEntry(ids, drop = FALSE)
  5.       └─private$bdb$getFactory()$getEntry(self$getId(), id = id, drop = drop)
  6.         └─private$loadEntries(conn$getId(), missing.ids, drop = FALSE)
  7.           └─conn$getEntryContent(ids)
  8.             └─self$getEntryContentFromDb(ch.missing.ids)
  9.               └─private$doGetEntryContentFromDb(entry.id)
 10.                 └─private$doGetEntryContentOneByOne(id)
 11.                   └─scheduler$sendRequest(requests[[i]])
 12.                     └─cch$saveContentToFile(...)
 13.                       └─private$doSaveContentToFile(...)
 14.                         └─biodb:::saveContentsToFiles(file.paths, content)
 15.                           └─base::mapply(function(cnt, f) cat(cnt, file = f), contents, files)
 16.                             └─biodb (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
 17.                               └─base::cat(cnt, file = f)
 18.                                 └─base::file(file, ifelse(append, "a", "w"))
── Error ('test_long_100_compound.R:16:1'): Input data frame is not modified by annotateMzValues() ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
     ▆
  1. ├─base::do.call(fct, params)
  2. └─biodb (local) `<fn>`(conn = `<KggCmpnC>`, opt = `<named list>`)
  3.   └─conn$annotateMzValues(...)
  4.     └─self$getEntry(ids, drop = FALSE)
  5.       └─private$bdb$getFactory()$getEntry(self$getId(), id = id, drop = drop)
  6.         └─private$loadEntries(conn$getId(), missing.ids, drop = FALSE)
  7.           └─conn$getEntryContent(ids)
  8.             └─self$getEntryContentFromDb(ch.missing.ids)
  9.               └─private$doGetEntryContentFromDb(entry.id)
 10.                 └─private$doGetEntryContentOneByOne(id)
 11.                   └─scheduler$sendRequest(requests[[i]])
 12.                     └─cch$saveContentToFile(...)
 13.                       └─private$doSaveContentToFile(...)
 14.                         └─biodb:::saveContentsToFiles(file.paths, content)
 15.                           └─base::mapply(function(cnt, f) cat(cnt, file = f), contents, files)
 16.                             └─biodb (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
 17.                               └─base::cat(cnt, file = f)
 18.                                 └─base::file(file, ifelse(append, "a", "w"))
── Error ('test_long_100_compound.R:16:1'): annotateMzValues() works correctly with real values. ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
     ▆
  1. ├─base::do.call(fct, params)
  2. └─biodb (local) `<fn>`(conn = `<KggCmpnC>`, opt = `<named list>`)
  3.   └─conn$annotateMzValues(...)
  4.     └─self$searchForEntries(fieldsFilter, max.results = max.results)
  5.       └─private$doSearchForEntries(fields = fields, max.results = max.results)
  6.         └─private$searchByMass(ids = ids, fields = fields)
  7.           └─self$wsFind(query = query, option = option, retfmt = "ids.no.prefix")
  8.             └─self$getBiodb()$getRequestScheduler()$sendRequest(request)
  9.               └─cch$saveContentToFile(...)
 10.                 └─private$doSaveContentToFile(...)
 11.                   └─biodb:::saveContentsToFiles(file.paths, content)
 12.                     └─base::mapply(function(cnt, f) cat(cnt, file = f), contents, files)
 13.                       └─biodb (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
 14.                         └─base::cat(cnt, file = f)
 15.                           └─base::file(file, ifelse(append, "a", "w"))
── Error ('test_long_100_compound.R:16:1'): Additional fields are accepted in annotateMzValues() ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
     ▆
  1. ├─base::do.call(fct, params)
  2. └─biodb (local) `<fn>`(conn = `<KggCmpnC>`, opt = `<named list>`)
  3.   └─conn$annotateMzValues(...)
  4.     └─self$getEntry(ids, drop = FALSE)
  5.       └─private$bdb$getFactory()$getEntry(self$getId(), id = id, drop = drop)
  6.         └─private$loadEntries(conn$getId(), missing.ids, drop = FALSE)
  7.           └─conn$getEntryContent(ids)
  8.             └─self$getEntryContentFromDb(ch.missing.ids)
  9.               └─private$doGetEntryContentFromDb(entry.id)
 10.                 └─private$doGetEntryContentOneByOne(id)
 11.                   └─scheduler$sendRequest(requests[[i]])
 12.                     └─cch$saveContentToFile(...)
 13.                       └─private$doSaveContentToFile(...)
 14.                         └─biodb:::saveContentsToFiles(file.paths, content)
 15.                           └─base::mapply(function(cnt, f) cat(cnt, file = f), contents, files)
 16.                             └─biodb (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
 17.                               └─base::cat(cnt, file = f)
 18.                                 └─base::file(file, ifelse(append, "a", "w"))
── Failure ('test_long_200_enzyme.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggEnzyC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_200_enzyme.R:16:1'): We can search for an entry by searchable field ──
c(`1.1.1.165` = "1.1.1.165") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggEnzyC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_200_enzyme.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry 1.1.1.165 by name "2-alkyn-1-ol dehydrogenase".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggEnzyC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_200_enzyme.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry 1.1.1.165 by name "2-alkyn-1-ol dehydrogenase".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggEnzyC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by searchable field ──
c(`mmu%3A14635` = "mmu:14635") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by searchable field ──
c(`mmu%3A14635` = "mmu:14635") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry mmu:14635 by name "(RefSeq) galactokinase 1".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_300_genes.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry mmu:14635 by name "(RefSeq) galactokinase 1".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGnsCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_350_glycan.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGlycC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_350_glycan.R:16:1'): We can search for an entry by searchable field ──
c(G00018 = "G00018") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGlycC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_350_glycan.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry G00018 by name "DS 3".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGlycC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_350_glycan.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry G00018 by name "DS 3".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggGlycC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_400_module.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggMdlCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_400_module.R:16:1'): We can search for an entry by searchable field ──
c(M00009 = "M00009") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggMdlCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_400_module.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry M00009 by name "Citrate cycle (TCA cycle, Krebs cycle)".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggMdlCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_400_module.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry M00009 by name "Citrate cycle (TCA cycle, Krebs cycle)".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggMdlCn>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_500_orthology.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggOrthC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_500_orthology.R:16:1'): We can search for an entry by searchable field ──
c(K12668 = "K12668") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggOrthC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_500_orthology.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry K12668 by name "dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggOrthC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_500_orthology.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry K12668 by name "dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggOrthC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_600_pathway.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggPthwC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_600_pathway.R:16:1'): We can search for an entry by searchable field ──
c(map00053 = "map00053") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggPthwC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_600_pathway.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry map00053 by name "Ascorbate and aldarate metabolism".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggPthwC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_600_pathway.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry map00053 by name "Ascorbate and aldarate metabolism".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggPthwC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)
── Failure ('test_long_700_reaction.R:16:1'): We can search for an entry by searchable field ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggRctnC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0)
── Failure ('test_long_700_reaction.R:16:1'): We can search for an entry by searchable field ──
c(R00105 = "R00105") %in% character(0) is not TRUE

`actual`:   FALSE
`expected`: TRUE 
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggRctnC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(!!id %in% !!ids)
── Failure ('test_long_700_reaction.R:16:1'): We can search for an entry by name. ──
length(ids) > 0 is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry R00105 by name "ATP:NADH 2'-phosphotransferase".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggRctnC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(length(ids) > 0, msg)
── Failure ('test_long_700_reaction.R:16:1'): We can search for an entry by name. ──
id %in% ids is not TRUE

`actual`:   FALSE
`expected`: TRUE 
While searching for entry R00105 by name "ATP:NADH 2'-phosphotransferase".
Backtrace:
    ▆
 1. ├─base::do.call(fct, params)
 2. └─biodb (local) `<fn>`(conn = `<KggRctnC>`, opt = `<named list>`)
 3.   └─testthat::expect_true(id %in% ids, msg)

[ FAIL 35 | WARN 5 | SKIP 0 | PASS 1549 ]
Error: Test failures
Execution halted

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###
### Running command:
###
###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no biodbKegg_1.11.0.tar.gz
###
##############################################################################
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* using log directory 'F:/biocbuild/bbs-3.20-bioc-longtests/meat/biodbKegg.Rcheck'
* using R version 4.4.0 RC (2024-04-16 r86468 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using options '--no-codoc --no-examples --no-manual --ignore-vignettes --no-stop-on-test-error'
* checking for file 'biodbKegg/DESCRIPTION' ... OK
* this is package 'biodbKegg' version '1.11.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'biodbKegg' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... SKIPPED
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... SKIPPED
* checking examples ... SKIPPED
* checking for unstated dependencies in 'longtests' ... OK
* checking tests in 'longtests' ...
  Running 'testthat.R'
 ERROR
Running the tests in 'longtests/testthat.R' failed.
Last 13 lines of output:
  ── Failure ('test_long_700_reaction.R:16:1'): We can search for an entry by name. ──
  id %in% ids is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  While searching for entry R00105 by name "ATP:NADH 2'-phosphotransferase".
  Backtrace:
      ▆
   1. ├─base::do.call(fct, params)
   2. └─biodb (local) `<fn>`(conn = `<KggRctnC>`, opt = `<named list>`)
   3.   └─testthat::expect_true(id %in% ids, msg)
  
  [ FAIL 35 | WARN 5 | SKIP 0 | PASS 1549 ]
  Error: Test failures
  Execution halted
* DONE

Status: 1 ERROR
See
  'F:/biocbuild/bbs-3.20-bioc-longtests/meat/biodbKegg.Rcheck/00check.log'
for details.

* installing *source* package 'biodbKegg' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (biodbKegg)